Literature DB >> 23723803

Bis(4-nitro-phen-yl) selenide.

Zong-Le Zuo1.   

Abstract

In the title compound, C12H8N2O4Se, the Se atom is situated on a twofold rotational axis, so the asymmetric unit contains one half-mol-ecule. In the mol-ecule, the C-Se-C angle is 99.48 (13)°, the two benzene rings are inclined to each other at an angle of 63.8 (1)° and the nitro group is twisted by 15.9 (1)° from the attached benzene ring. In the crystal, mol-ecules are held together through weak C-H⋯O inter-actions, forming a three-dimensional network.

Entities:  

Year:  2013        PMID: 23723803      PMCID: PMC3647837          DOI: 10.1107/S1600536813007526

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of organoselenium compounds, see: Mugesh et al. (2001 ▶); Nogueira et al. (2004 ▶); Wirth (1999 ▶). For details of the synthesis, see: Taniguchi (2005 ▶). The crystal structures of the related compounds bis­(p-tol­yl) selenide and bis­(4-acetyl­phen­yl) selenide were reported by Blackmore & Abrahams (1955 ▶) and Bouraoui et al. (2011 ▶), respectively.

Experimental

Crystal data

C12H8N2O4Se M = 323.16 Monoclinic, a = 7.207 (4) Å b = 14.176 (7) Å c = 11.686 (5) Å β = 101.870 (7)° V = 1168.3 (9) Å3 Z = 4 Mo Kα radiation μ = 3.23 mm−1 T = 153 K 0.47 × 0.34 × 0.34 mm

Data collection

Rigaku AFC10/Saturn724+ diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2008 ▶) T min = 0.314, T max = 0.402 4848 measured reflections 1557 independent reflections 1298 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.074 S = 1.00 1557 reflections 87 parameters H-atom parameters constrained Δρmax = 0.70 e Å−3 Δρmin = −0.50 e Å−3 Data collection: CrystalClear (Rigaku, 2008 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813007526/cv5389sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813007526/cv5389Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813007526/cv5389Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H8N2O4SeF(000) = 640
Mr = 323.16Dx = 1.837 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 1957 reflections
a = 7.207 (4) Åθ = 2.9–29.1°
b = 14.176 (7) ŵ = 3.23 mm1
c = 11.686 (5) ÅT = 153 K
β = 101.870 (7)°Block, yellow
V = 1168.3 (9) Å30.47 × 0.34 × 0.34 mm
Z = 4
Rigaku AFC10/Saturn724+ diffractometer1557 independent reflections
Radiation source: fine-focus sealed tube1298 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.036
Detector resolution: 28.5714 pixels mm-1θmax = 29.1°, θmin = 3.2°
phi and ω scansh = −9→9
Absorption correction: multi-scan (CrystalClear; Rigaku, 2008)k = −19→16
Tmin = 0.314, Tmax = 0.402l = −15→11
4848 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.030Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.074H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.0351P)2 + 0.160P] where P = (Fo2 + 2Fc2)/3
1557 reflections(Δ/σ)max < 0.001
87 parametersΔρmax = 0.70 e Å3
0 restraintsΔρmin = −0.50 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Se0.00000.05282 (2)0.75000.02293 (12)
O1−0.6302 (3)−0.18522 (11)0.34112 (15)0.0281 (4)
O2−0.5748 (2)−0.29360 (11)0.47417 (15)0.0251 (4)
N1−0.5486 (3)−0.21464 (13)0.43644 (16)0.0182 (4)
C1−0.1638 (3)−0.03449 (14)0.65264 (19)0.0162 (4)
C2−0.2197 (3)−0.01493 (15)0.53474 (19)0.0166 (4)
H2−0.17110.03920.50300.020*
C3−0.3464 (3)−0.07375 (15)0.4622 (2)0.0176 (5)
H3−0.3873−0.06010.38130.021*
C4−0.4114 (3)−0.15292 (14)0.51142 (19)0.0157 (4)
C5−0.3547 (3)−0.17464 (16)0.6281 (2)0.0195 (5)
H5−0.3994−0.23030.65880.023*
C6−0.2320 (3)−0.11472 (15)0.70005 (19)0.0198 (5)
H6−0.1942−0.12790.78120.024*
U11U22U33U12U13U23
Se0.02479 (19)0.01636 (18)0.0236 (2)0.000−0.00441 (13)0.000
O10.0308 (10)0.0249 (9)0.0228 (9)0.0009 (7)−0.0082 (7)−0.0017 (7)
O20.0284 (10)0.0164 (8)0.0296 (10)−0.0054 (7)0.0037 (8)−0.0012 (7)
N10.0158 (10)0.0187 (10)0.0197 (10)0.0021 (7)0.0024 (8)−0.0048 (7)
C10.0145 (10)0.0153 (11)0.0180 (11)0.0013 (8)0.0016 (8)−0.0020 (8)
C20.0163 (10)0.0147 (10)0.0191 (12)0.0014 (8)0.0039 (9)0.0038 (8)
C30.0174 (11)0.0205 (12)0.0142 (11)0.0038 (8)0.0016 (8)0.0019 (8)
C40.0130 (10)0.0154 (11)0.0182 (11)0.0023 (8)0.0016 (8)−0.0045 (8)
C50.0223 (12)0.0160 (11)0.0199 (12)−0.0010 (9)0.0038 (9)0.0031 (8)
C60.0245 (12)0.0205 (12)0.0134 (11)−0.0014 (9)0.0018 (9)0.0026 (8)
Se—C11.915 (2)C2—H20.9500
Se—C1i1.915 (2)C3—C41.386 (3)
O1—N11.221 (2)C3—H30.9500
O2—N11.232 (2)C4—C51.375 (3)
N1—C41.468 (3)C5—C61.380 (3)
C1—C21.382 (3)C5—H50.9500
C1—C61.398 (3)C6—H60.9500
C2—C31.389 (3)
C1—Se—C1i99.48 (13)C4—C3—H3121.0
O1—N1—O2123.79 (19)C2—C3—H3121.0
O1—N1—C4118.68 (18)C5—C4—C3122.4 (2)
O2—N1—C4117.53 (18)C5—C4—N1118.99 (19)
C2—C1—C6120.3 (2)C3—C4—N1118.59 (19)
C2—C1—Se118.71 (16)C4—C5—C6119.3 (2)
C6—C1—Se120.96 (17)C4—C5—H5120.4
C1—C2—C3120.6 (2)C6—C5—H5120.4
C1—C2—H2119.7C5—C6—C1119.5 (2)
C3—C2—H2119.7C5—C6—H6120.2
C4—C3—C2117.9 (2)C1—C6—H6120.2
C1i—Se—C1—C2−139.8 (2)O2—N1—C4—C5−15.9 (3)
C1i—Se—C1—C642.66 (16)O1—N1—C4—C3−14.9 (3)
C6—C1—C2—C31.0 (3)O2—N1—C4—C3165.32 (19)
Se—C1—C2—C3−176.55 (16)C3—C4—C5—C61.5 (3)
C1—C2—C3—C4−1.2 (3)N1—C4—C5—C6−177.24 (19)
C2—C3—C4—C5−0.1 (3)C4—C5—C6—C1−1.7 (3)
C2—C3—C4—N1178.67 (18)C2—C1—C6—C50.4 (3)
O1—N1—C4—C5163.9 (2)Se—C1—C6—C5177.94 (17)
D—H···AD—HH···AD···AD—H···A
C2—H2···O2ii0.952.513.426 (3)162
C6—H6···O2iii0.952.503.427 (3)164
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C2—H2⋯O2i 0.952.513.426 (3)162
C6—H6⋯O2ii 0.952.503.427 (3)164

Symmetry codes: (i) ; (ii) .

  4 in total

Review 1.  Chemistry of biologically important synthetic organoselenium compounds.

Authors:  G Mugesh; W W du Mont; H Sies
Journal:  Chem Rev       Date:  2001-07       Impact factor: 60.622

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 3.  Organoselenium and organotellurium compounds: toxicology and pharmacology.

Authors:  Cristina W Nogueira; Gilson Zeni; João B T Rocha
Journal:  Chem Rev       Date:  2004-12       Impact factor: 60.622

4.  Bis(4-acetyl-phen-yl) selenide.

Authors:  Hazem Bouraoui; Ali Boudjada; Sofiane Bouacida; Youcef Mechehoud; Jean Meinnel
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-23
  4 in total
  3 in total

1.  Crystal structure of 1,1'-[selanediyl-bis(4,1-phenyl-ene)]bis-(2-chloro-ethan-1-one).

Authors:  Hazem Bouraoui; Ali Boudjada; Noudjoud Hamdouni; Youcef Mechehoud; Jean Meinnel
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-11-14

2.  Crystal structure and Hirshfeld surface analysis of (2E,2'E)-1,1'-[seleno-bis-(4,1-phenyl-ene)]bis-[3-(4-chloro-phen-yl)prop-2-en-1-one].

Authors:  Hazem Bouraoui; Youcef Mechehoud; Souheyla Chetioui; Rachid Touzani; Meriem Medjani; Ahmed Benmilat; Ali Boudjada
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2019-10-22

Review 3.  Zero-, one-, two- and three-dimensional supramolecular architectures sustained by SeO chalcogen bonding: A crystallographic survey.

Authors:  Edward R T Tiekink
Journal:  Coord Chem Rev       Date:  2020-10-17       Impact factor: 22.315

  3 in total

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