| Literature DB >> 26870534 |
Shaaban K Mohamed1, Joel T Mague2, Mehmet Akkurt3, Mustafa R Albayati4, Alaa F Mohamed5.
Abstract
In the title mol-ecule, C21H14N4O4, the phenyl rings make dihedral angles of 39.61 (8) and 9.4 (1)°, respectively, with the central pyrazole ring. The dihedral angle between the pyrazole and di-nitro-phenyl rings is 46.95 (5)°. In the crystal, mol-ecules pack in helical stacks parallel to the a axis aided by weak C-H⋯O inter-actions.Entities:
Keywords: bio-active motifs; crystal structure; pyrazoles
Year: 2015 PMID: 26870534 PMCID: PMC4719887 DOI: 10.1107/S2056989015021350
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| C21H14N4O4 | |
| Mo | |
| Orthorhombic, | Cell parameters from 4944 reflections |
| θ = 2.6–24.1° | |
| µ = 0.10 mm−1 | |
| Block, yellow-orange | |
| 0.18 × 0.18 × 0.17 mm | |
| Bruker SMART APEX CCD diffractometer | 4635 independent reflections |
| Radiation source: fine-focus sealed tube | 3401 reflections with |
| Graphite monochromator | |
| Detector resolution: 8.3333 pixels mm-1 | θmax = 29.1°, θmin = 1.9° |
| φ and ω scans | |
| Absorption correction: multi-scan ( | |
| 17283 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 4635 reflections | Δρmax = 0.21 e Å−3 |
| 262 parameters | Δρmin = −0.17 e Å−3 |
| 0 restraints | Absolute structure: Flack |
| Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.3 (8) |
| Experimental. The diffraction data were collected in three sets of 363 frames (0.5° width in ω) at φ = 0, 120 and 240°. A scan time of 40 sec/frame was used. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.0335 (2) | 0.48865 (13) | 0.50537 (9) | 0.0369 (4) | |
| O2 | 0.1081 (3) | 0.56459 (13) | 0.40944 (10) | 0.0466 (5) | |
| O3 | 0.1707 (3) | 0.33782 (17) | 0.21292 (9) | 0.0617 (6) | |
| O4 | 0.2274 (3) | 0.17545 (18) | 0.22859 (9) | 0.0625 (6) | |
| N1 | 0.2445 (3) | 0.26495 (13) | 0.58248 (9) | 0.0280 (4) | |
| N2 | 0.3024 (2) | 0.33719 (12) | 0.53522 (9) | 0.0261 (4) | |
| N3 | 0.1040 (2) | 0.48950 (14) | 0.44764 (10) | 0.0319 (4) | |
| N4 | 0.2043 (3) | 0.2633 (2) | 0.24971 (11) | 0.0464 (6) | |
| C1 | 0.3782 (3) | 0.42265 (15) | 0.56610 (11) | 0.0268 (5) | |
| C2 | 0.3640 (3) | 0.40575 (17) | 0.63603 (11) | 0.0284 (5) | |
| H2 | 0.4021 | 0.4511 | 0.6720 | 0.034* | |
| C3 | 0.2814 (3) | 0.30750 (17) | 0.64398 (11) | 0.0279 (5) | |
| C4 | 0.4636 (3) | 0.50690 (16) | 0.52632 (11) | 0.0260 (5) | |
| C5 | 0.5697 (3) | 0.48621 (18) | 0.46740 (12) | 0.0305 (5) | |
| H5 | 0.5917 | 0.4167 | 0.4539 | 0.037* | |
| C6 | 0.6430 (3) | 0.56641 (17) | 0.42857 (12) | 0.0334 (5) | |
| H6 | 0.7123 | 0.5519 | 0.3879 | 0.040* | |
| C7 | 0.6152 (3) | 0.66760 (18) | 0.44903 (13) | 0.0377 (6) | |
| H7 | 0.6639 | 0.7226 | 0.4220 | 0.045* | |
| C8 | 0.5167 (4) | 0.68884 (19) | 0.50876 (13) | 0.0379 (6) | |
| H8 | 0.5010 | 0.7583 | 0.5235 | 0.045* | |
| C9 | 0.4406 (3) | 0.60891 (17) | 0.54720 (12) | 0.0338 (5) | |
| H9 | 0.3723 | 0.6239 | 0.5881 | 0.041* | |
| C10 | 0.2384 (3) | 0.24957 (17) | 0.70755 (11) | 0.0297 (5) | |
| C11 | 0.2507 (3) | 0.29519 (19) | 0.77262 (12) | 0.0377 (6) | |
| H11 | 0.2866 | 0.3656 | 0.7764 | 0.045* | |
| C12 | 0.2113 (4) | 0.2394 (2) | 0.83180 (13) | 0.0456 (7) | |
| H12 | 0.2220 | 0.2715 | 0.8759 | 0.055* | |
| C13 | 0.1569 (4) | 0.1382 (2) | 0.82749 (13) | 0.0459 (7) | |
| H13 | 0.1295 | 0.1004 | 0.8684 | 0.055* | |
| C14 | 0.1421 (4) | 0.0917 (2) | 0.76378 (14) | 0.0491 (7) | |
| H14 | 0.1038 | 0.0217 | 0.7605 | 0.059* | |
| C15 | 0.1830 (4) | 0.14687 (18) | 0.70429 (13) | 0.0413 (6) | |
| H15 | 0.1731 | 0.1139 | 0.6605 | 0.050* | |
| C16 | 0.2618 (3) | 0.31836 (16) | 0.46461 (10) | 0.0254 (4) | |
| C17 | 0.1820 (3) | 0.39223 (16) | 0.42117 (11) | 0.0277 (5) | |
| C18 | 0.1647 (3) | 0.37515 (18) | 0.35076 (12) | 0.0329 (5) | |
| H18 | 0.1168 | 0.4271 | 0.3210 | 0.040* | |
| C19 | 0.2188 (3) | 0.28098 (18) | 0.32499 (11) | 0.0328 (5) | |
| C20 | 0.2869 (3) | 0.20328 (18) | 0.36702 (12) | 0.0332 (5) | |
| H20 | 0.3171 | 0.1376 | 0.3482 | 0.040* | |
| C21 | 0.3104 (3) | 0.22280 (16) | 0.43688 (11) | 0.0293 (5) | |
| H21 | 0.3600 | 0.1707 | 0.4662 | 0.035* |
| O1 | 0.0335 (9) | 0.0348 (10) | 0.0423 (10) | 0.0026 (7) | 0.0025 (8) | 0.0002 (8) |
| O2 | 0.0523 (11) | 0.0286 (9) | 0.0588 (11) | 0.0032 (8) | −0.0003 (10) | 0.0159 (9) |
| O3 | 0.0703 (13) | 0.0840 (15) | 0.0308 (10) | −0.0060 (12) | −0.0092 (9) | 0.0152 (10) |
| O4 | 0.0708 (14) | 0.0772 (15) | 0.0394 (11) | 0.0100 (12) | −0.0055 (10) | −0.0219 (10) |
| N1 | 0.0297 (10) | 0.0279 (10) | 0.0264 (9) | −0.0008 (8) | −0.0002 (8) | 0.0051 (8) |
| N2 | 0.0293 (9) | 0.0228 (9) | 0.0261 (9) | −0.0012 (8) | −0.0007 (7) | 0.0017 (7) |
| N3 | 0.0264 (9) | 0.0276 (10) | 0.0418 (12) | −0.0005 (8) | −0.0052 (9) | 0.0052 (9) |
| N4 | 0.0402 (12) | 0.0702 (17) | 0.0289 (12) | −0.0053 (12) | −0.0022 (9) | −0.0018 (12) |
| C1 | 0.0261 (11) | 0.0231 (11) | 0.0313 (12) | 0.0014 (9) | −0.0008 (9) | −0.0022 (9) |
| C2 | 0.0300 (11) | 0.0255 (11) | 0.0297 (11) | −0.0004 (9) | −0.0019 (10) | −0.0021 (9) |
| C3 | 0.0276 (11) | 0.0303 (12) | 0.0256 (11) | 0.0037 (9) | −0.0006 (9) | −0.0009 (9) |
| C4 | 0.0235 (11) | 0.0260 (12) | 0.0286 (11) | −0.0011 (9) | −0.0032 (9) | −0.0004 (9) |
| C5 | 0.0279 (12) | 0.0264 (12) | 0.0372 (13) | 0.0003 (9) | −0.0004 (10) | −0.0019 (10) |
| C6 | 0.0280 (12) | 0.0363 (13) | 0.0360 (13) | −0.0027 (10) | 0.0023 (10) | 0.0017 (11) |
| C7 | 0.0347 (12) | 0.0318 (13) | 0.0467 (14) | −0.0085 (10) | −0.0016 (12) | 0.0058 (11) |
| C8 | 0.0421 (14) | 0.0253 (13) | 0.0462 (15) | −0.0045 (11) | −0.0027 (11) | −0.0031 (11) |
| C9 | 0.0396 (13) | 0.0282 (12) | 0.0335 (12) | −0.0011 (10) | 0.0005 (11) | −0.0059 (11) |
| C10 | 0.0274 (11) | 0.0340 (13) | 0.0278 (11) | 0.0006 (10) | −0.0014 (10) | 0.0005 (10) |
| C11 | 0.0420 (14) | 0.0382 (14) | 0.0329 (13) | −0.0083 (11) | 0.0034 (11) | −0.0026 (10) |
| C12 | 0.0544 (17) | 0.0531 (16) | 0.0293 (13) | −0.0042 (14) | 0.0032 (12) | −0.0003 (12) |
| C13 | 0.0553 (17) | 0.0519 (17) | 0.0304 (14) | −0.0078 (14) | 0.0004 (12) | 0.0116 (12) |
| C14 | 0.0721 (19) | 0.0360 (15) | 0.0394 (14) | −0.0103 (14) | −0.0031 (14) | 0.0091 (12) |
| C15 | 0.0616 (16) | 0.0329 (13) | 0.0293 (12) | −0.0054 (12) | −0.0031 (12) | 0.0015 (10) |
| C16 | 0.0234 (10) | 0.0264 (11) | 0.0265 (11) | −0.0034 (9) | −0.0013 (9) | 0.0024 (9) |
| C17 | 0.0257 (11) | 0.0255 (11) | 0.0320 (12) | −0.0043 (9) | −0.0007 (9) | 0.0029 (10) |
| C18 | 0.0300 (12) | 0.0364 (13) | 0.0324 (12) | −0.0055 (10) | −0.0040 (10) | 0.0092 (10) |
| C19 | 0.0315 (12) | 0.0430 (14) | 0.0240 (11) | −0.0077 (11) | −0.0020 (10) | 0.0011 (10) |
| C20 | 0.0321 (12) | 0.0335 (13) | 0.0340 (13) | −0.0033 (10) | 0.0014 (10) | −0.0056 (10) |
| C21 | 0.0294 (12) | 0.0288 (12) | 0.0296 (12) | −0.0015 (9) | −0.0025 (9) | 0.0022 (9) |
| O1—N3 | 1.225 (2) | C8—C9 | 1.387 (3) |
| O2—N3 | 1.220 (2) | C8—H8 | 0.9500 |
| O3—N4 | 1.222 (3) | C9—H9 | 0.9500 |
| O4—N4 | 1.220 (3) | C10—C15 | 1.390 (3) |
| N1—C3 | 1.335 (3) | C10—C11 | 1.391 (3) |
| N1—N2 | 1.372 (2) | C11—C12 | 1.381 (3) |
| N2—C1 | 1.371 (3) | C11—H11 | 0.9500 |
| N2—C16 | 1.415 (3) | C12—C13 | 1.371 (4) |
| N3—C17 | 1.471 (3) | C12—H12 | 0.9500 |
| N4—C19 | 1.475 (3) | C13—C14 | 1.373 (4) |
| C1—C2 | 1.371 (3) | C13—H13 | 0.9500 |
| C1—C4 | 1.469 (3) | C14—C15 | 1.384 (3) |
| C2—C3 | 1.413 (3) | C14—H14 | 0.9500 |
| C2—H2 | 0.9500 | C15—H15 | 0.9500 |
| C3—C10 | 1.471 (3) | C16—C21 | 1.393 (3) |
| C4—C9 | 1.391 (3) | C16—C17 | 1.396 (3) |
| C4—C5 | 1.397 (3) | C17—C18 | 1.382 (3) |
| C5—C6 | 1.385 (3) | C18—C19 | 1.373 (3) |
| C5—H5 | 0.9500 | C18—H18 | 0.9500 |
| C6—C7 | 1.383 (3) | C19—C20 | 1.383 (3) |
| C6—H6 | 0.9500 | C20—C21 | 1.382 (3) |
| C7—C8 | 1.382 (3) | C20—H20 | 0.9500 |
| C7—H7 | 0.9500 | C21—H21 | 0.9500 |
| C3—N1—N2 | 104.42 (17) | C15—C10—C11 | 117.7 (2) |
| C1—N2—N1 | 112.51 (17) | C15—C10—C3 | 120.71 (19) |
| C1—N2—C16 | 129.82 (17) | C11—C10—C3 | 121.5 (2) |
| N1—N2—C16 | 117.39 (16) | C12—C11—C10 | 120.8 (2) |
| O2—N3—O1 | 124.5 (2) | C12—C11—H11 | 119.6 |
| O2—N3—C17 | 117.58 (19) | C10—C11—H11 | 119.6 |
| O1—N3—C17 | 117.85 (17) | C13—C12—C11 | 120.6 (2) |
| O4—N4—O3 | 124.7 (2) | C13—C12—H12 | 119.7 |
| O4—N4—C19 | 117.7 (2) | C11—C12—H12 | 119.7 |
| O3—N4—C19 | 117.6 (2) | C12—C13—C14 | 119.7 (2) |
| N2—C1—C2 | 105.63 (19) | C12—C13—H13 | 120.1 |
| N2—C1—C4 | 122.64 (19) | C14—C13—H13 | 120.1 |
| C2—C1—C4 | 131.6 (2) | C13—C14—C15 | 120.0 (2) |
| C1—C2—C3 | 106.38 (19) | C13—C14—H14 | 120.0 |
| C1—C2—H2 | 126.8 | C15—C14—H14 | 120.0 |
| C3—C2—H2 | 126.8 | C14—C15—C10 | 121.2 (2) |
| N1—C3—C2 | 111.04 (18) | C14—C15—H15 | 119.4 |
| N1—C3—C10 | 119.27 (18) | C10—C15—H15 | 119.4 |
| C2—C3—C10 | 129.68 (19) | C21—C16—C17 | 118.79 (19) |
| C9—C4—C5 | 118.9 (2) | C21—C16—N2 | 118.11 (18) |
| C9—C4—C1 | 120.2 (2) | C17—C16—N2 | 123.06 (18) |
| C5—C4—C1 | 120.87 (19) | C18—C17—C16 | 121.2 (2) |
| C6—C5—C4 | 120.4 (2) | C18—C17—N3 | 116.36 (19) |
| C6—C5—H5 | 119.8 | C16—C17—N3 | 122.39 (18) |
| C4—C5—H5 | 119.8 | C19—C18—C17 | 118.2 (2) |
| C7—C6—C5 | 120.0 (2) | C19—C18—H18 | 120.9 |
| C7—C6—H6 | 120.0 | C17—C18—H18 | 120.9 |
| C5—C6—H6 | 120.0 | C18—C19—C20 | 122.3 (2) |
| C8—C7—C6 | 120.1 (2) | C18—C19—N4 | 118.3 (2) |
| C8—C7—H7 | 120.0 | C20—C19—N4 | 119.4 (2) |
| C6—C7—H7 | 120.0 | C21—C20—C19 | 118.9 (2) |
| C7—C8—C9 | 120.1 (2) | C21—C20—H20 | 120.6 |
| C7—C8—H8 | 120.0 | C19—C20—H20 | 120.6 |
| C9—C8—H8 | 120.0 | C20—C21—C16 | 120.4 (2) |
| C8—C9—C4 | 120.4 (2) | C20—C21—H21 | 119.8 |
| C8—C9—H9 | 119.8 | C16—C21—H21 | 119.8 |
| C4—C9—H9 | 119.8 | ||
| C3—N1—N2—C1 | 1.4 (2) | C11—C12—C13—C14 | 0.3 (4) |
| C3—N1—N2—C16 | −173.15 (17) | C12—C13—C14—C15 | 0.3 (5) |
| N1—N2—C1—C2 | −1.6 (2) | C13—C14—C15—C10 | −0.3 (4) |
| C16—N2—C1—C2 | 172.1 (2) | C11—C10—C15—C14 | −0.2 (4) |
| N1—N2—C1—C4 | 174.98 (19) | C3—C10—C15—C14 | −179.9 (3) |
| C16—N2—C1—C4 | −11.4 (3) | C1—N2—C16—C21 | 135.4 (2) |
| N2—C1—C2—C3 | 1.1 (2) | N1—N2—C16—C21 | −51.2 (3) |
| C4—C1—C2—C3 | −175.0 (2) | C1—N2—C16—C17 | −42.3 (3) |
| N2—N1—C3—C2 | −0.6 (2) | N1—N2—C16—C17 | 131.2 (2) |
| N2—N1—C3—C10 | −179.24 (18) | C21—C16—C17—C18 | −5.3 (3) |
| C1—C2—C3—N1 | −0.3 (2) | N2—C16—C17—C18 | 172.3 (2) |
| C1—C2—C3—C10 | 178.1 (2) | C21—C16—C17—N3 | 171.68 (19) |
| N2—C1—C4—C9 | 142.0 (2) | N2—C16—C17—N3 | −10.7 (3) |
| C2—C1—C4—C9 | −42.4 (4) | O2—N3—C17—C18 | −32.5 (3) |
| N2—C1—C4—C5 | −38.4 (3) | O1—N3—C17—C18 | 144.9 (2) |
| C2—C1—C4—C5 | 137.2 (3) | O2—N3—C17—C16 | 150.3 (2) |
| C9—C4—C5—C6 | −3.2 (3) | O1—N3—C17—C16 | −32.3 (3) |
| C1—C4—C5—C6 | 177.2 (2) | C16—C17—C18—C19 | 3.6 (3) |
| C4—C5—C6—C7 | 1.6 (3) | N3—C17—C18—C19 | −173.60 (19) |
| C5—C6—C7—C8 | 1.0 (4) | C17—C18—C19—C20 | 0.8 (3) |
| C6—C7—C8—C9 | −2.0 (4) | C17—C18—C19—N4 | −178.7 (2) |
| C7—C8—C9—C4 | 0.4 (4) | O4—N4—C19—C18 | −169.8 (2) |
| C5—C4—C9—C8 | 2.2 (3) | O3—N4—C19—C18 | 10.5 (3) |
| C1—C4—C9—C8 | −178.2 (2) | O4—N4—C19—C20 | 10.6 (3) |
| N1—C3—C10—C15 | 8.4 (3) | O3—N4—C19—C20 | −169.1 (2) |
| C2—C3—C10—C15 | −169.9 (2) | C18—C19—C20—C21 | −3.4 (3) |
| N1—C3—C10—C11 | −171.3 (2) | N4—C19—C20—C21 | 176.2 (2) |
| C2—C3—C10—C11 | 10.4 (4) | C19—C20—C21—C16 | 1.6 (3) |
| C15—C10—C11—C12 | 0.8 (4) | C17—C16—C21—C20 | 2.7 (3) |
| C3—C10—C11—C12 | −179.5 (2) | N2—C16—C21—C20 | −175.03 (19) |
| C10—C11—C12—C13 | −0.8 (4) |
| H··· | ||||
| C21—H21···O1i | 0.95 | 2.48 | 3.366 (3) | 156 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C21—H21⋯O1i | 0.95 | 2.48 | 3.366 (3) | 156 |
Symmetry code: (i) .