Literature DB >> 26864793

Fundamentals of Trapped Ion Mobility Spectrometry Part II: Fluid Dynamics.

Joshua A Silveira1, Karsten Michelmann1, Mark E Ridgeway1, Melvin A Park2.   

Abstract

Trapped ion mobility spectrometry (TIMS) is a new high resolution (R up to ~300) separation technique that utilizes an electric field to hold ions stationary against a moving gas. Recently, an analytical model for TIMS was derived and, in part, experimentally verified. A central, but not yet fully explored, component of the model involves the fluid dynamics at work. The present study characterizes the fluid dynamics in TIMS using simulations and ion mobility experiments. Results indicate that subsonic laminar flow develops in the analyzer, with pressure-dependent gas velocities between ~120 and 170 m/s measured at the position of ion elution. One of the key philosophical questions addressed is: how can mobility be measured in a dynamic system wherein the gas is expanding and its velocity is changing? We noted previously that the analytically useful work is primarily done on ions as they traverse the electric field gradient plateau in the analyzer. In the present work, we show that the position-dependent change in gas velocity on the plateau is balanced by a change in pressure and temperature, ultimately resulting in near position-independent drag force. That the drag force, and related variables, are nearly constant allows for the use of relatively simple equations to describe TIMS behavior. Nonetheless, we derive a more comprehensive model, which accounts for the spatial dependence of the flow variables. Experimental resolving power trends were found to be in close agreement with the theoretical dependence of the drag force, thus validating another principal component of TIMS theory.

Entities:  

Keywords:  Gas flow; Ion mobility mass spectrometry; Quadrupole time of flight mass spectrometry; Resolving power; TIMS theory

Year:  2016        PMID: 26864793     DOI: 10.1007/s13361-015-1310-z

Source DB:  PubMed          Journal:  J Am Soc Mass Spectrom        ISSN: 1044-0305            Impact factor:   3.109


  40 in total

1.  Evolution of Hydrogen-Bond Networks in Protonated Water Clusters H(+)(H2O)n (n = 1 to 120) Studied by Cryogenic Ion Mobility-Mass Spectrometry.

Authors:  Kelly A Servage; Joshua A Silveira; Kyle L Fort; David H Russell
Journal:  J Phys Chem Lett       Date:  2014-05-13       Impact factor: 6.475

2.  Detection of aqueous phase chemical warfare agent degradation products by negative mode ion mobility time-of-flight mass spectrometry [IM(tof)MS].

Authors:  Wes E Steiner; Charles S Harden; Feng Hong; Steve J Klopsch; Herbert H Hill; Vincent M McHugh
Journal:  J Am Soc Mass Spectrom       Date:  2006-01-18       Impact factor: 3.109

3.  Ion mobility-mass spectrometry analysis of large protein complexes.

Authors:  Brandon T Ruotolo; Justin L P Benesch; Alan M Sandercock; Suk-Joon Hyung; Carol V Robinson
Journal:  Nat Protoc       Date:  2008-06-19       Impact factor: 13.491

4.  Proteome-wide characterization of the RNA-binding protein RALY-interactome using the in vivo-biotinylation-pulldown-quant (iBioPQ) approach.

Authors:  Stefan Tenzer; Albertomaria Moro; Jörg Kuharev; Ashwanth Christopher Francis; Laura Vidalino; Alessandro Provenzani; Paolo Macchi
Journal:  J Proteome Res       Date:  2013-05-06       Impact factor: 4.466

5.  Interrogating viral capsid assembly with ion mobility-mass spectrometry.

Authors:  Charlotte Uetrecht; Ioana M Barbu; Glen K Shoemaker; Esther van Duijn; Albert J R Heck
Journal:  Nat Chem       Date:  2010-12-19       Impact factor: 24.427

6.  Infrared Spectroscopy of Mobility-Selected H+-Gly-Pro-Gly-Gly (GPGG).

Authors:  Antoine Masson; Michael Z Kamrath; Marta A S Perez; Matthew S Glover; U Rothlisberger; David E Clemmer; Thomas R Rizzo
Journal:  J Am Soc Mass Spectrom       Date:  2015-06-20       Impact factor: 3.109

7.  Characterizing intermediates along the transition from polyproline I to polyproline II using ion mobility spectrometry-mass spectrometry.

Authors:  Liuqing Shi; Alison E Holliday; Huilin Shi; Feifei Zhu; Michael A Ewing; David H Russell; David E Clemmer
Journal:  J Am Chem Soc       Date:  2014-08-27       Impact factor: 15.419

8.  Ion mobility spectrometry/mass spectrometry snapshots for assessing the molecular compositions of complex polymeric systems.

Authors:  Sarah Trimpin; David E Clemmer
Journal:  Anal Chem       Date:  2008-12-01       Impact factor: 6.986

9.  Experimental evaluation and optimization of structures for lossless ion manipulations for ion mobility spectrometry with time-of-flight mass spectrometry.

Authors:  Ian K Webb; Sandilya V B Garimella; Aleksey V Tolmachev; Tsung-Chi Chen; Xinyu Zhang; Randolph V Norheim; Spencer A Prost; Brian LaMarche; Gordon A Anderson; Yehia M Ibrahim; Richard D Smith
Journal:  Anal Chem       Date:  2014-09-05       Impact factor: 6.986

10.  Label-free mass spectrometry proteome quantification of human embryonic kidney cells following 24 hours of sialic acid overproduction.

Authors:  Ville I Parviainen; Sakari Joenväärä; Niina Tohmola; Risto Renkonen
Journal:  Proteome Sci       Date:  2013-08-01       Impact factor: 2.480

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  23 in total

1.  Trapped Ion Mobility Spectrometry of Native Macromolecular Assemblies.

Authors:  Kevin Jeanne Dit Fouque; Alyssa Garabedian; Fenfei Leng; Yuk-Ching Tse-Dinh; Mark E Ridgeway; Melvin A Park; Francisco Fernandez-Lima
Journal:  Anal Chem       Date:  2021-01-25       Impact factor: 6.986

2.  Following Structural Changes by Thermal Denaturation Using Trapped Ion Mobility Spectrometry-Mass Spectrometry.

Authors:  Kevin Jeanne Dit Fouque; Francisco Fernandez-Lima
Journal:  J Phys Chem B       Date:  2020-07-14       Impact factor: 2.991

3.  Validation of Calibration Parameters for Trapped Ion Mobility Spectrometry.

Authors:  Cameron N Naylor; Tobias Reinecke; Mark E Ridgeway; Melvin A Park; Brian H Clowers
Journal:  J Am Soc Mass Spectrom       Date:  2019-08-07       Impact factor: 3.109

4.  Discovery and targeted monitoring of polychlorinated biphenyl metabolites in blood plasma using LC-TIMS-TOF MS.

Authors:  Kendra J Adams; Natalie F Smith; Cesar E Ramirez; Francisco Fernandez-Lima
Journal:  Int J Mass Spectrom       Date:  2017-11-21       Impact factor: 1.986

5.  Analysis of Photoirradiated Water Accommodated Fractions of Crude Oils Using Tandem TIMS and FT-ICR MS.

Authors:  Paolo Benigni; Kathia Sandoval; Christopher J Thompson; Mark E Ridgeway; Melvin A Park; Piero Gardinali; Francisco Fernandez-Lima
Journal:  Environ Sci Technol       Date:  2017-05-09       Impact factor: 9.028

6.  Gated Trapped Ion Mobility Spectrometry Coupled to Fourier Transform Ion Cyclotron Resonance Mass Spectrometry.

Authors:  Mark E Ridgeway; Jeremy J Wolff; Joshua A Silveira; Cheng Lin; Catherine E Costello; Melvin A Park
Journal:  Int J Ion Mobil Spectrom       Date:  2016-03-29

7.  Towards Discovery and Targeted Peptide Biomarker Detection Using nanoESI-TIMS-TOF MS.

Authors:  Alyssa Garabedian; Paolo Benigni; Cesar E Ramirez; Erin S Baker; Tao Liu; Richard D Smith; Francisco Fernandez-Lima
Journal:  J Am Soc Mass Spectrom       Date:  2017-09-09       Impact factor: 3.109

8.  Utilizing Ion Mobility to Identify Isobaric Post-Translational Modifications: Resolving Acrolein and Propionyl Lysine Adducts by TIMS Mass Spectrometry.

Authors:  Jose D Gomez; Mark E Ridgeway; Melvin A Park; Kristofer S Fritz
Journal:  Int J Ion Mobil Spectrom       Date:  2018-08-09

9.  Comment on Effective Temperature and Structural Rearrangement in Trapped Ion Mobility Spectrometry.

Authors:  Christian Bleiholder; Fanny C Liu; Mengqi Chai
Journal:  Anal Chem       Date:  2020-11-20       Impact factor: 6.986

10.  Effective discrimination of gas-phase peptide conformers using TIMS-ECD-ToF MS/MS.

Authors:  K Jeanne Dit Fouque; M Wellmann; D Leyva Bombuse; M Santos-Fernandez; Y L Cintron-Diaz; M E Gomez-Hernandez; D Kaplan; V G Voinov; F Fernandez-Lima
Journal:  Anal Methods       Date:  2021-11-11       Impact factor: 2.896

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