Literature DB >> 26862177

Miscues misplace sponges.

Kenneth M Halanych1, Nathan V Whelan1, Kevin M Kocot2, Andrea B Kohn3, Leonid L Moroz4.   

Abstract

Mesh:

Year:  2016        PMID: 26862177      PMCID: PMC4776479          DOI: 10.1073/pnas.1525332113

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


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  7 in total

1.  Genomic data do not support comb jellies as the sister group to all other animals.

Authors:  Davide Pisani; Walker Pett; Martin Dohrmann; Roberto Feuda; Omar Rota-Stabelli; Hervé Philippe; Nicolas Lartillot; Gert Wörheide
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-30       Impact factor: 11.205

2.  Error, signal, and the placement of Ctenophora sister to all other animals.

Authors:  Nathan V Whelan; Kevin M Kocot; Leonid L Moroz; Kenneth M Halanych
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-20       Impact factor: 11.205

3.  The genome of the ctenophore Mnemiopsis leidyi and its implications for cell type evolution.

Authors:  Joseph F Ryan; Kevin Pang; Christine E Schnitzler; Anh-Dao Nguyen; R Travis Moreland; David K Simmons; Bernard J Koch; Warren R Francis; Paul Havlak; Stephen A Smith; Nicholas H Putnam; Steven H D Haddock; Casey W Dunn; Tyra G Wolfsberg; James C Mullikin; Mark Q Martindale; Andreas D Baxevanis
Journal:  Science       Date:  2013-12-13       Impact factor: 47.728

4.  Genomic insights into the evolutionary origin of Myxozoa within Cnidaria.

Authors:  E Sally Chang; Moran Neuhof; Nimrod D Rubinstein; Arik Diamant; Hervé Philippe; Dorothée Huchon; Paulyn Cartwright
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-16       Impact factor: 11.205

5.  Resolving difficult phylogenetic questions: why more sequences are not enough.

Authors:  Hervé Philippe; Henner Brinkmann; Dennis V Lavrov; D Timothy J Littlewood; Michael Manuel; Gert Wörheide; Denis Baurain
Journal:  PLoS Biol       Date:  2011-03-15       Impact factor: 8.029

6.  The ctenophore genome and the evolutionary origins of neural systems.

Authors:  Leonid L Moroz; Kevin M Kocot; Mathew R Citarella; Sohn Dosung; Tigran P Norekian; Inna S Povolotskaya; Anastasia P Grigorenko; Christopher Dailey; Eugene Berezikov; Katherine M Buckley; Andrey Ptitsyn; Denis Reshetov; Krishanu Mukherjee; Tatiana P Moroz; Yelena Bobkova; Fahong Yu; Vladimir V Kapitonov; Jerzy Jurka; Yuri V Bobkov; Joshua J Swore; David O Girardo; Alexander Fodor; Fedor Gusev; Rachel Sanford; Rebecca Bruders; Ellen Kittler; Claudia E Mills; Jonathan P Rast; Romain Derelle; Victor V Solovyev; Fyodor A Kondrashov; Billie J Swalla; Jonathan V Sweedler; Evgeny I Rogaev; Kenneth M Halanych; Andrea B Kohn
Journal:  Nature       Date:  2014-05-21       Impact factor: 49.962

7.  Extracting phylogenetic signal and accounting for bias in whole-genome data sets supports the Ctenophora as sister to remaining Metazoa.

Authors:  Marek L Borowiec; Ernest K Lee; Joanna C Chiu; David C Plachetzki
Journal:  BMC Genomics       Date:  2015-11-23       Impact factor: 3.969

  7 in total
  11 in total

1.  Reply to Halanych et al.: Ctenophore misplacement is corroborated by independent datasets.

Authors:  Davide Pisani; Walker Pett; Martin Dohrmann; Roberto Feuda; Omar Rota-Stabelli; Hervé Philippe; Nicolas Lartillot; Gert Wörheide
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-09       Impact factor: 11.205

2.  The Last Common Ancestor of Most Bilaterian Animals Possessed at Least Nine Opsins.

Authors:  M Desmond Ramirez; Autum N Pairett; M Sabrina Pankey; Jeanne M Serb; Daniel I Speiser; Andrew J Swafford; Todd H Oakley
Journal:  Genome Biol Evol       Date:  2016-12-01       Impact factor: 3.416

3.  New genomic data and analyses challenge the traditional vision of animal epithelium evolution.

Authors:  Hassiba Belahbib; Emmanuelle Renard; Sébastien Santini; Cyril Jourda; Jean-Michel Claverie; Carole Borchiellini; André Le Bivic
Journal:  BMC Genomics       Date:  2018-05-24       Impact factor: 3.969

4.  Secreted frizzled related protein is a target of PaxB and plays a role in aquiferous system development in the freshwater sponge, Ephydatia muelleri.

Authors:  Chelsea Hall; Melanie Rodriguez; Josephine Garcia; Dora Posfai; Rachel DuMez; Erik Wictor; Omar A Quintero; Malcolm S Hill; Ajna S Rivera; April L Hill
Journal:  PLoS One       Date:  2019-02-22       Impact factor: 3.240

5.  OMA standalone: orthology inference among public and custom genomes and transcriptomes.

Authors:  Adrian M Altenhoff; Jeremy Levy; Magdalena Zarowiecki; Bartłomiej Tomiczek; Alex Warwick Vesztrocy; Daniel A Dalquen; Steven Müller; Maximilian J Telford; Natasha M Glover; David Dylus; Christophe Dessimoz
Journal:  Genome Res       Date:  2019-06-24       Impact factor: 9.043

6.  Evidence for sponges as sister to all other animals from partitioned phylogenomics with mixture models and recoding.

Authors:  Anthony K Redmond; Aoife McLysaght
Journal:  Nat Commun       Date:  2021-03-19       Impact factor: 14.919

Review 7.  Evolution of glutamatergic signaling and synapses.

Authors:  Leonid L Moroz; Mikhail A Nikitin; Pavlin G Poličar; Andrea B Kohn; Daria Y Romanova
Journal:  Neuropharmacology       Date:  2021-07-31       Impact factor: 5.273

8.  Ctenophore relationships and their placement as the sister group to all other animals.

Authors:  Nathan V Whelan; Kevin M Kocot; Tatiana P Moroz; Krishanu Mukherjee; Peter Williams; Gustav Paulay; Leonid L Moroz; Kenneth M Halanych
Journal:  Nat Ecol Evol       Date:  2017-10-09       Impact factor: 15.460

9.  Phylogenetic Analyses of Sites in Different Protein Structural Environments Result in Distinct Placements of the Metazoan Root.

Authors:  Akanksha Pandey; Edward L Braun
Journal:  Biology (Basel)       Date:  2020-03-28

10.  A late-surviving stem-ctenophore from the Late Devonian of Miguasha (Canada).

Authors:  Christian Klug; Johanne Kerr; Michael S Y Lee; Richard Cloutier
Journal:  Sci Rep       Date:  2021-09-24       Impact factor: 4.379

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