Literature DB >> 26860365

Dynamic stem cell states: naive to primed pluripotency in rodents and humans.

Leehee Weinberger1, Muneef Ayyash1, Noa Novershtern1, Jacob H Hanna1.   

Abstract

The molecular mechanisms and signalling pathways that regulate the in vitro preservation of distinct pluripotent stem cell configurations, and their induction in somatic cells by direct reprogramming, constitute a highly exciting area of research. In this Review, we integrate recent discoveries related to isolating unique naive and primed pluripotent stem cell states with altered functional and molecular characteristics, and from different species. We provide an overview of the pathways underlying pluripotent state transitions and interconversion in vitro and in vivo. We conclude by highlighting unresolved key questions, future directions and potential novel applications of such dynamic pluripotent cell states.

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Year:  2016        PMID: 26860365     DOI: 10.1038/nrm.2015.28

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  120 in total

1.  DNA Demethylation Dynamics in the Human Prenatal Germline.

Authors:  Sofia Gkountela; Kelvin X Zhang; Tiasha A Shafiq; Wen-Wei Liao; Joseph Hargan-Calvopiña; Pao-Yang Chen; Amander T Clark
Journal:  Cell       Date:  2015-05-21       Impact factor: 41.582

2.  Dynamic and static maintenance of epigenetic memory in pluripotent and somatic cells.

Authors:  Zohar Shipony; Zohar Mukamel; Netta Mendelson Cohen; Gilad Landan; Elad Chomsky; Shlomit Reich Zeliger; Yael Chagit Fried; Elena Ainbinder; Nir Friedman; Amos Tanay
Journal:  Nature       Date:  2014-07-13       Impact factor: 49.962

3.  Inhibition of pluripotential embryonic stem cell differentiation by purified polypeptides.

Authors:  A G Smith; J K Heath; D D Donaldson; G G Wong; J Moreau; M Stahl; D Rogers
Journal:  Nature       Date:  1988-12-15       Impact factor: 49.962

4.  Human adult germline stem cells in question.

Authors:  Kinarm Ko; Marcos J Araúzo-Bravo; Natalia Tapia; Julee Kim; Qiong Lin; Christof Bernemann; Dong Wook Han; Luca Gentile; Peter Reinhardt; Boris Greber; Rebekka K Schneider; Sabine Kliesch; Martin Zenke; Hans R Schöler
Journal:  Nature       Date:  2010-06-24       Impact factor: 49.962

5.  Klf2 is an essential factor that sustains ground state pluripotency.

Authors:  Jia-Chi Yeo; Jianming Jiang; Zi-Ying Tan; Guo-Rong Yim; Jia-Hui Ng; Jonathan Göke; Petra Kraus; Hongqing Liang; Kevin Andrew Uy Gonzales; Han-Chung Chong; Cheng-Peow Tan; Yee-Siang Lim; Nguan-Soon Tan; Thomas Lufkin; Huck-Hui Ng
Journal:  Cell Stem Cell       Date:  2014-06-05       Impact factor: 24.633

6.  Calcineurin-NFAT signaling critically regulates early lineage specification in mouse embryonic stem cells and embryos.

Authors:  Xiang Li; Lili Zhu; Acong Yang; Jiangwei Lin; Fan Tang; Shibo Jin; Zhe Wei; Jinsong Li; Ying Jin
Journal:  Cell Stem Cell       Date:  2011-01-07       Impact factor: 24.633

7.  A genome-wide RNAi screen reveals determinants of human embryonic stem cell identity.

Authors:  Na-Yu Chia; Yun-Shen Chan; Bo Feng; Xinyi Lu; Yuriy L Orlov; Dimitri Moreau; Pankaj Kumar; Lin Yang; Jianming Jiang; Mei-Sheng Lau; Mikael Huss; Boon-Seng Soh; Petra Kraus; Pin Li; Thomas Lufkin; Bing Lim; Neil D Clarke; Frederic Bard; Huck-Hui Ng
Journal:  Nature       Date:  2010-10-17       Impact factor: 49.962

8.  Induction of pluripotency in adult unipotent germline stem cells.

Authors:  Kinarm Ko; Natalia Tapia; Guangming Wu; Jeong Beom Kim; Marcos J Araúzo Bravo; Philipp Sasse; Tamara Glaser; David Ruau; Dong Wook Han; Boris Greber; Kirsten Hausdörfer; Vittorio Sebastiano; Martin Stehling; Bernd K Fleischmann; Oliver Brüstle; Martin Zenke; Hans R Schöler
Journal:  Cell Stem Cell       Date:  2009-07-02       Impact factor: 24.633

9.  In vitro reprogramming of fibroblasts into a pluripotent ES-cell-like state.

Authors:  Marius Wernig; Alexander Meissner; Ruth Foreman; Tobias Brambrink; Manching Ku; Konrad Hochedlinger; Bradley E Bernstein; Rudolf Jaenisch
Journal:  Nature       Date:  2007-06-06       Impact factor: 49.962

10.  Resetting transcription factor control circuitry toward ground-state pluripotency in human.

Authors:  Yasuhiro Takashima; Ge Guo; Remco Loos; Jennifer Nichols; Gabriella Ficz; Felix Krueger; David Oxley; Fatima Santos; James Clarke; William Mansfield; Wolf Reik; Paul Bertone; Austin Smith
Journal:  Cell       Date:  2014-09-11       Impact factor: 41.582

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  202 in total

Review 1.  Molecular features of cellular reprogramming and development.

Authors:  Zachary D Smith; Camille Sindhu; Alexander Meissner
Journal:  Nat Rev Mol Cell Biol       Date:  2016-02-17       Impact factor: 94.444

Review 2.  The interplay of epigenetic marks during stem cell differentiation and development.

Authors:  Yaser Atlasi; Hendrik G Stunnenberg
Journal:  Nat Rev Genet       Date:  2017-08-14       Impact factor: 53.242

Review 3.  Mechanisms of protein homeostasis (proteostasis) maintain stem cell identity in mammalian pluripotent stem cells.

Authors:  Alireza Noormohammadi; Giuseppe Calculli; Ricardo Gutierrez-Garcia; Amirabbas Khodakarami; Seda Koyuncu; David Vilchez
Journal:  Cell Mol Life Sci       Date:  2017-07-26       Impact factor: 9.261

Review 4.  Metabolic remodeling during the loss and acquisition of pluripotency.

Authors:  Julie Mathieu; Hannele Ruohola-Baker
Journal:  Development       Date:  2017-02-15       Impact factor: 6.868

5.  Metabolic plasticity complements the unique nature and demands of distinct pluripotency states.

Authors:  Mina Popovic; Björn Heindryckx
Journal:  Stem Cell Investig       Date:  2017-02-13

Review 6.  Ground rules of the pluripotency gene regulatory network.

Authors:  Mo Li; Juan Carlos Izpisua Belmonte
Journal:  Nat Rev Genet       Date:  2017-01-03       Impact factor: 53.242

Review 7.  Deconstructing and reconstructing the mouse and human early embryo.

Authors:  Marta N Shahbazi; Magdalena Zernicka-Goetz
Journal:  Nat Cell Biol       Date:  2018-07-23       Impact factor: 28.824

8.  Comprehensive Mapping of Pluripotent Stem Cell Metabolism Using Dynamic Genome-Scale Network Modeling.

Authors:  Sriram Chandrasekaran; Jin Zhang; Zhen Sun; Li Zhang; Christian A Ross; Yu-Chung Huang; John M Asara; Hu Li; George Q Daley; James J Collins
Journal:  Cell Rep       Date:  2017-12-05       Impact factor: 9.423

9.  First critical repressive H3K27me3 marks in embryonic stem cells identified using designed protein inhibitor.

Authors:  James D Moody; Shiri Levy; Julie Mathieu; Yalan Xing; Woojin Kim; Cheng Dong; Wolfram Tempel; Aaron M Robitaille; Luke T Dang; Amy Ferreccio; Damien Detraux; Sonia Sidhu; Licheng Zhu; Lauren Carter; Chao Xu; Cristina Valensisi; Yuliang Wang; R David Hawkins; Jinrong Min; Randall T Moon; Stuart H Orkin; David Baker; Hannele Ruohola-Baker
Journal:  Proc Natl Acad Sci U S A       Date:  2017-09-01       Impact factor: 11.205

10.  Tankyrase inhibition promotes a stable human naïve pluripotent state with improved functionality.

Authors:  Ludovic Zimmerlin; Tea Soon Park; Jeffrey S Huo; Karan Verma; Sarshan R Pather; C Conover Talbot; Jasmin Agarwal; Diana Steppan; Yang W Zhang; Michael Considine; Hong Guo; Xiufeng Zhong; Christian Gutierrez; Leslie Cope; M Valeria Canto-Soler; Alan D Friedman; Stephen B Baylin; Elias T Zambidis
Journal:  Development       Date:  2016-09-22       Impact factor: 6.868

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