Devi Murtini1, Ni Putu Desy Aryantini1, I Nengah Sujaya2, Tadasu Urashima1, Kenji Fukuda1. 1. Department of Animal and Food Hygiene, Obihiro University of Agriculture and Veterinary Medicine, Inada-cho, Obihiro, Hokkaido 080-8555, Japan. 2. Integrated Laboratory for Bioscience and Biotechnology, Udayana University, Bukit Jimbaran Campus, Badung, Bali, Indonesia.
Abstract
To investigate carbohydrate preference of a potential probiotic, Lactobacillus rhamnosus FSMM15, six prebiotics, including two milk-derived prebiotics, galactooligosaccharides and lacto-N-biose I, and four plant-origin prebiotics, beet oligosaccharide syrup, difructose anhydride III, fructooligosaccharides, and raffinose, were examined. The strain utilized the milk-derived prebiotics at similar levels to glucose but did not utilize the plant-origin ones in the same manner, reflecting their genetic background, which allows them to adapt to dairy ecological niches. These prebiotics had little influence on the expression pattern of cell surface-associated proteins in the strain; however, an ATP-binding cassette transporter substrate-binding protein and a glyceraldehyde-3-phosphate dehydrogenase were suggested to be upregulated in response to carbon starvation stress.
To investigate carbohydrate preference of a potential probiotic, Lactobacillus rhamnosus FSMM15, six prebiotics, including two milk-derived prebiotics, galactooligosaccharides and lacto-N-biose I, and four plant-origin prebiotics, beetoligosaccharide syrup, difructose anhydride III, fructooligosaccharides, and raffinose, were examined. The strain utilized the milk-derived prebiotics at similar levels to glucose but did not utilize the plant-origin ones in the same manner, reflecting their genetic background, which allows them to adapt to dairy ecological niches. These prebiotics had little influence on the expression pattern of cell surface-associated proteins in the strain; however, an ATP-binding cassette transporter substrate-binding protein and a glyceraldehyde-3-phosphate dehydrogenase were suggested to be upregulated in response to carbon starvation stress.
Lactobacillus rhamnosus strain FSMM15 (FSMM15) was recently isolated as a potential probiotic
from a fermented mare milk, which was traditionally produced by domestic farmers living on Sumbawa Island in
Indonesia [1]. FSMM15 was tolerant to low pH and bile salts at a level
comparable to a commercial probiotic, L. rhamnosus GG ATCC53103 (LGG) [1]. FSMM15 showed the ability to adhere to a porcine gastric mucin at a level similar to LGG,
whereas it was significantly less adhesive to a mouse derived glycoprotein, laminin, which constitute the
extracellular matrix [1]. Prebiotics are nutritional substances that promote
growth of probiotics preferentially, but known prebiotics are not necessarily utilized by all the probiotics
reported. Furthermore, little is known about effects of prebiotics consumption on the cell surface proteins in
lactobacilli and Bifidobacteria, although Schar-Zammaretti et al. [2]
reported that the concentration of cell surface-associated proteins of Lactobacillus acidophilus
increased slightly, with the physicochemical properties and structure of the cell wall remaining almost unchanged,
when the carbohydrate content in the culture medium was largely reduced. In terms of cytosolic proteins, van
Zanten et al. [3] demonstrated that a potential prebiotic, cellobiose,
upregulated two β-glycoside hydrolases in L. acidophilus NCFM. It is important for desirable use
of aimed probiotics in the food industries to clarify which prebiotics are effectively utilized by them. We
evaluated the growth of FSMM15 for this purpose using six prebiotics, beetoligosaccharide syrup (BOS), difructose
anhydride III (DFA III), fructooligosaccharides (FOSs), galactooligosaccharides (GOSs),
lacto-N-biose I (LNB I), and raffinose (RAF), as sole carbon sources added to de Man, Rogosa and
Sharpe (MRS) broth in this study. Furthermore, since cell surface proteins, such as S-layer proteins [4] and LPXTG-anchored proteins [5], are
directly related to host-bacteria interactions, effects of prebiotics supplementation on expression profiles of
cell surface-associated proteins extracted by a combination of lysozyme and lithium chloride were
investigated.FSMM15 was obtained from our library of lactic acid bacteria at Obihiro University of Agriculture and Veterinary
Medicine. A single colony of FSMM15 formed on an MRS agar plate was inoculated into 5 ml of MRS broth supplemented
with 2% glucose as a carbon source and incubated statically at 37°C for 24 hr under anaerobic conditions (a
CO2 concentration of approximately 20%) using an AnaeroPack Kenki system (Mitsubishi Gas Chemical Co.
Inc., Tokyo, Japan). A 20-μl aliquot of this culture broth was inoculated into 5 ml of a fresh MRS broth under
sterile conditions and incubated as described above. After the 24-hr incubation, cells were harvested, washed
twice with phosphate-buffered saline (PBS), and inoculated into 50 ml of a modified MRS broth supplemented with 2%
each of the six 0.2-μm-filter-sterilized prebiotics as a sole carbon source (Tables 1 and 2), resulting in an optical density (OD) of 0.3 at a wavelength of 600 nm. Modified MRS broths
supplemented with or without glucose were used as positive (termed GLC) and negative (termed BM) controls,
respectively. All these broths were then incubated at 37°C for 132 hr under the anaerobic conditions. One-ml
aliquots of the culture broths were sampled under sterile conditions in every 12 hr. OD600nm values of
the samples were measured spectrophotometrically, and their colony forming units (CFUs) were determined by
counting colonies formed by streaking diluted culture broth with PBS on MRS agar plates under sterile conditions.
All the experiments were done in triplicate. Generation time (Tg) was calculated with the
following equation:where t is the appropriate time interval during the
logarithmic phase, N0hr indicates the viable cell count at the starting time point (0 hr) of the
interval, and N24hr indicates the viable cell count at the end time point (24 hr) of the interval.
Table 1.
Prebiotics used in this study
Name
Description
Beet oligosaccharide syrup (BOS)
Beet Oligo (Nippon Beet Sugar Manufacturing Co., Ltd., Tokyo, Japan), made
from beet molasses, containing 11% of oligosaccharides and 67% other carbohydrates
Difructose anhydride III (DFA III)
A cyclic disaccharide, di-d-fructofuranose-1,2’:2,3’-dianhydride, enzymatically produced from inulin (Nippon Beet
Sugar Manufacturing Co., Ltd.)
Fructooligosaccharides (FOSs)
Meioligo P (Meiji Seika Kaisha Ltd., Tokyo, Japan), a mixture of 42%
1-kestose, 46% nystose, and 9% 1F-β-fructofuranosylnystose
Galactooligosaccharides (GOSs)
Oligomate-55NP (Yakult Honsha Co., Ltd., Tokyo, Japan), containing not less
than 55% galactooligosaccharides and not more than 45% simple sugar and lactose
Lacto-N-biose I (LNB I)
A disaccharide, 2-acetamido-2-deoxy-3-O-(β-d-galactopyranosyl)-d-glucopyranose, enzymatically synthesized by Dr.
Nishimoto and Dr. Kitaoka at the National Food Research Institute (Tsukuba, Japan)
Raffinose (RAF)
A trisaccharide, β-d-fructofuranosyl-O-α-d-galactopyranosyl-(1→6)-α-d-glucopyranoside; purity>98% (Nippon Beet Sugar
Manufacturing)
Table 2.
Composition of the modified MRS brotha)
Componentb)
Concentration (g/l)
Ammonium citrate tribasic
2
Carbon sourcec)
20
Dipotassium hydrogen phosphate
2
Lab-Lemco powderd)
8
Magnesium sulfate heptahydrate
0.2
Manganese (II) sulfate tetrahydrate
0.05
Peptonee)
10
Sodium acetate trihydrate
5
Tween 80
1
Yeast extracte)
4
a)All components except for the carbon source were dissolved in distilled water, followed by pH
adjustment to 6.2–6.6 and sterilization at 121°C for 15 min. A filter-sterilized carbon source was added
under sterile conditions to the mixture afterward. b)All chemicals were analytical grade unless
otherwise stated. c)Modified MRS media supplemented with or without glucose was prepared as a
positive control (GLC) and a negative control (BM), respectively. d)From Oxoid Ltd. (Basingstoke,
UK). e)From BD Biosciences (Sparks, MD, USA).
The major structural difference between the milk-derived (GOSs and LNB I) and plant-origin (DFA III, FOSs, and
RAF) prebiotics is the presence of galactose and fructose residues, respectively, in the nonreducing end. To
utilize such carbohydrates, bacteria should possess specific sugar transporters and enzymes that enable metabolism
of them. As shown in Fig. 1, DFA III (Tg = 204 min), FOSs (Tg = 195 min), and RAF
(Tg = 129 min) exhibited almost the same growth as BM (Tg = 227 min),
indicating these three prebiotics were apparently unutilized by FSMM15. Hence, FSMM15 may lack either enzymes
metabolizing these prebiotics, such as fructosidase [6] and DFA IIIase
[7], or functional transporter machinery, such as the
phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS) and sugar-specific permease, which are required
for uptake of them. These plant-origin prebiotics are simply not the primary carbohydrates for FSMM15 to adapt to
the ecological niche where they survive. On the other hand, as expected, the best prebiotic for the growth of
FSMM15 was GOSs (Tg = 198 min), which resulted in an OD600 nm value of approximately
3.7 and a similar cell population, about 8.5 logCFU/ml, compared with GLC (Tg = 89 min) in the
stationary phase. FSMM15 grew on BOS (Tg = 136 min) in a manner similar to its growth on GOSs;
however, this was not due to its major oligosaccharide content, RAF, but was due to other carbohydrates in BOS
(Table 1). It is well documented that lactose and GOSs are utilized
by lactobacilli via the common metabolic pathways, PEP-PTS/phospho-β-galactosidases and permease/β-galactosidase
[reviewed in 8]. Moreover, FSMM15 was capable of utilizing LNB I (also known
as β-D-galactosyl-1,3-N-acetyl-D-glucosamine; Tg = 129 min), which is found in
nature as a partial structure of human milk oligosaccharides [9], in a
manner unlikely to Bifidobacterium longum strains that have a gene cluster for the utilization of
LNB I, including a lacto-N-biose phosphorylase gene [10].
Although the Tg with LNB I supplementation (129 min) was shorter than that of GOSs (198 min) for
the first 24 hr of cultivation, it decreased afterward, leading to slower growth of FSMM15 with LNB I than GOSs.
Despite the fact that the maximum OD600 nm value obtained for LNB I was around 3.5 in the stationary
phase, the cell population was similar to those with GLC and GOSs supplementation. In fact, utilization of LNB I
by FSMM15 was not surprising, because it was previously reported that strains belonging to the
Lactobacillus casei/paracasei/rhamnosus subgroup have a unique gene cluster,
gnbREFGBCDA, enabling utilization of galacto-N-biose, which is found in mucin,
and LNB I via the action of phospho-β-galactosidase [11]. To elucidate the
presence of a similar gene cluster in FSMM15, further studies are needed.
Fig. 1.
Growth curves of L. rhamnosus FSMM15 cultivated in the modified MRS broth supplemented
with various prebiotics as solo carbon sources.
Individual growth curves for BM (A), GLC (B), BOS (C), DFA III (D), FOSs (E), GOSs (F), LNB I (G), and RAF
(H) are shown. Values of OD600 nm and logCFU are indicated by solid and broken lines,
respectively. These experiments were performed in triplicate.
Growth curves of L. rhamnosus FSMM15 cultivated in the modified MRS broth supplemented
with various prebiotics as solo carbon sources.Individual growth curves for BM (A), GLC (B), BOS (C), DFA III (D), FOSs (E), GOSs (F), LNB I (G), and RAF
(H) are shown. Values of OD600 nm and logCFU are indicated by solid and broken lines,
respectively. These experiments were performed in triplicate.Next, to investigate effects of prebiotic supplementation on expression profiles of cell surface-associated
proteins of FSMM15, cell surface-associated proteins of FSMM15 were extracted from cells harvested at the end of
the logarithmic growth phase by centrifugation (3,000 × g, 15 min, 4°C) from 50 ml of the
modified MRS broth (Table 2). The harvested cells were washed twice with cold PBS, suspended in an adequate volume (1 ml/0.1 g
wet weight of the harvested cells) of 2 mg/ml lysozyme (Sigma-Aldrich, St. Louis, MO, USA) dissolved in 0.1 M
Tris-HCl (pH 8.0) containing 15 mM NaCl and 50 mM MgCl2, and then incubated at 37°C for 1 hr. After
that, the supernatant was collected by centrifugation (12,000 × g, 15 min, 4°C). The cell pellet
was suspended consecutively in an adequate volume (1 ml/0.1 g wet weight of the harvested cells) of 1 M LiCl
(Sigma-Aldrich) solution and then incubated at 20°C for 20 hr according to the method of a previous report [12]. The supernatant was collected by centrifugation (8,000 ×
g, 30 min, 4°C). Each of the collected supernatants was filtered with a nitrocellulose membrane
(0.2 μm of pore size, Merck Millipore, Billerica, MA, USA). Their protein concentrations were estimated by
measuring the absorbance at a wavelength of 280 nm, assuming the molar absorption coefficient, , to be 10. After subjecting the filtrates to a desalting
procedure using a PD-10 column (GE Healthcare, Buckinghamshire, UK) according to the manufacturer’s instructions,
they were lyophilized and kept as extracted protein fractions in a desiccator until used.a)All components except for the carbon source were dissolved in distilled water, followed by pH
adjustment to 6.2–6.6 and sterilization at 121°C for 15 min. A filter-sterilized carbon source was added
under sterile conditions to the mixture afterward. b)All chemicals were analytical grade unless
otherwise stated. c)Modified MRS media supplemented with or without glucose was prepared as a
positive control (GLC) and a negative control (BM), respectively. d)From Oxoid Ltd. (Basingstoke,
UK). e)From BD Biosciences (Sparks, MD, USA).The cell viability of FSMM15 after the extraction treatments is summarized in Table 3, in which representative values obtained by two independent experiments are shown. The wet weights
of the harvested cells grown in the modified MRS broth supplemented with the prebiotics, except for LNB I, showed
good agreement with their viable cell counts in Fig. 1. The low yield of
cells from the modified MRS supplemented with LNB I seems simply to be an experimental error, as large variations
were observed in the viable cell counts of FSMM15 grew on LNB I, especially at the end of the logarithmic growth
phase (Fig. 1). In general, cell viability was drastically decreased, to
less than 20%, by treatment with lysozyme and LiCl, indicating possible leakage of cytoplasmic proteins into the
extracts. Interestingly, damage to the cells by the extraction procedure was strongly prevented, by more than 80%,
when FSMM15 grew on DFA III and FOSs and moderately prevented (63%) when FSMM15 grew on LNB I (Table 3), but the mechanism is unclear. In contrast to cell growth, the yields of
extracted cell surface-associated proteins per cell were notably high in BM, DFA III, and RAF. In general,
nutrient starvation leads to growth arrest, and hence lactobacilli have developed individual strategies to survive
starvation, e.g., modification of cell morphology and cell division at entry into the stationary phase, resulting
in diminished cell size [13]. Cytosolic proteins differentially expressed
in response to starvation in fact varied among lactobacilli. For example, Hussain et al. [14] reported that L. casei upregulates 16 proteins that are primarily
responsible for sugar metabolism in cytosol during the stationary growth phase. The same author also reported that
12 out of 19 upregulated proteins in starved cells were associated with amino acid metabolism, lipids
biosynthesis, or energy metabolisms other than glycolysis in L. rhamnosus, suggesting that
starved cells began to hunt for alternative energy sources, i.e., amino acids, lipids, or pentosesugars, when
they starved for lactose [15]. It was unclear why FOSs produced such a low
protein yield per cell, although they exhibited low cell growth similar to BM, DFA III, and RAF.
Table 3.
The cell viability of L. rhamnosus FSMM15 after the lysozyme-LiCl extraction
treatments
Carbon source
Harvest time (hr)
Wet weight of the harvested cells (g)
Viable cell counts (CFU/ml)
Cell viabilityc) (%)
Before extractiona)
After extractionb)
BM
48
0.10
6.75 × 106
7.50 × 105
11.11
GLC
36
0.62
1.57 × 109
1.68 × 108
10.66
BOS
36
0.69
1.45 × 108
2.54 × 107
17.53
DFA III
48
0.24
7.59 × 106
6.70 × 106
88.3
FOSs
48
0.35
2.75 × 108
2.29 × 108
83.36
GOSs
48
0.69
8.50 × 107
1.48 × 107
17.35
LNB I
72
0.29
4.75 × 107
3.00 × 107
63.16
RAF
48
0.17
6.88 × 106
6.25 × 105
9.09
c=(b/a)*100
c=(b/a)*100Expression profiles of the cell surface-associated proteins extracted with LiCl were then monitored by sodium
dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) using a 15% acrylamide gel and Tris-glycine buffer
system (0.025 M Tris-HCl (pH 8.3), 0.192 M glycine, 0.1% SDS). Each of the lyophilized protein extracts was
dissolved in 100 µl of loading buffer (0.06 M Tris-HCl (pH 6.8), 24.8% glycerol, 1.9% SDS, 0.0095% bromophenol
blue, 5% 2-mercaptoethanol), and then a 30-μl aliquot of each solution was heat denatured at 95°C for 5 min,
cooled down on ice, and loaded onto the polyacrylamide gel. Proteins were migrated at 200 V for approximately 40
min at room temperature using a Mini-PROTEAN Tetra Cell (Bio-Rad Laboratories, Hercules, CA, USA) and a PowerPac
Basic Power Supply (Bio-Rad Laboratories) and then were visualized with Coomassie Brilliant Blue R-250 (Bio-Rad
Laboratories). Precision Plus Protein Dual Color Standards (Bio-Rad Laboratories) were used as protein size
markers. For peptide-PAGE to monitor the expression profiles of lysozyme extracts, a 16.5% polyacrylamide gel and
Tris-tricine buffer system (0.01 M Tris-HCl (pH8.3), 0.01 M tricine, 0.01% SDS) was used. The lyophilized protein
extracts were dissolved in 100 µl of loading buffer (100 mM Tris-HCl (pH 6.8), 1% SDS, 20% glycerol, 0.02%
Coomassie Brilliant Blue R-250) and further treated as described above. Proteins were migrated at 100 V for
approximately 90 min at room temperature using the same equipment as above. Kaleidoscope Polypeptide Standards
(Bio-Rad Laboratories) were used as protein size markers.Protein bands that appeared on the SDS-PAGE gel were excised and washed thoroughly with 50% acetonitrile (ACN) in
10 mM NH4HCO3. After removing the solvent, gel pieces were dehydrated with 100% ACN and then
dried using a SpeedVac (Tokyo Rikakikai Co., Ltd., Tokyo, Japan). Next, the sulfhydryl group of cysteine residues
was protected by carbamidomethylation. In brief, the dehydrated gels were individually incubated with gently
shaking in 100 µl of 10 mM DL-dithiothreitol (Sigma-Aldrich) dissolved in 10 mM NH4HCO3 at
room temperature for 10 min. Then, the solvent was replaced by 100 µl of 55 mM iodoacetamide (Sigma-Aldrich)
dissolved in 10 mM NH4HCO3 and incubated with gently shaking at room temperature for 10 min
in the dark. The excised gels were then washed twice with 50% ACN in 10 mM NH4HCO3 and then
dried as described above. Each 3 µl of 100 ng/μl proteomic grade trypsin (Sigma-Aldrich), dissolved in 8.1% ACN in
36 mM NH4HCO3 containing 0.1 mM HCl, was added to the dried gels and incubated on ice for 5
min. To this mixture, 30 µl of 10 mM NH4HCO3 was added and incubated at 37°C overnight. The
tryptic digests were extracted twice from the gel pieces with 50 µl of a mixture of 0.1% trifluoroacetic acid
(TFA):100% ACN (1:1, v/v) by sonication for 15 min. Furthermore, the remaining tryptic digests were extracted with
50 µl of a mixture of 0.1% TFA:100% ACN (1:2, v/v) by sonication for 15 min. Solvents were totally removed from
the extracted peptide solutions using the SpeedVac. The dried peptides were dissolved in 50 µl of 0.1% TFA by
sonication for 15 min, and then desalted using ZipTip C18 pipette tips (Merck Millipore), according to the
manufacturer’s instructions. One microliter of the desalted peptide solution was mixed with an equal volume of
saturated α-cyano-4-hydroxycinnamic acid (Bruker Daltonik GmbH, Bremen, Germany) dissolved in a mixture of 0.1%
TFA:100% ACN (2:1, v/v), and then a 1-μl aliquot was mounted on an MTP 384 target plate ground steel T F (Bruker
Daltonik GmbH). After the spots were dried, the target plate was loaded into a mass spectrometer (autoflex II
TOF/TOF, Bruker Daltonik GmbH). Peptide mass fingerprinting (PMF) was carried out using the pre-installed method,
RP_1–3kDa (a reflector positive ion mode focusing on the mass range of 1–3 kDa), flexAnalysis 2.0 software (Bruker
Daltonik GmbH), and BioTools 3.0 interface (Bruker Daltonik GmbH) connected to the Mascot search engine [16]. Tandem mass (MS/MS) analysis was performed by LIFT mode with the autoflex
II TOF/TOF. Peptide Calibration Standard II (Bruker Daltonik GmbH) was used for external calibration of the mass
spectrometer.Proteomic analyses using one-dimensional PAGEs were performed independently on the proteins extracted with
lysozyme and consecutively with LiCl by peptide-PAGE and SDS-PAGE, respectively. No significant difference was
observed in the protein expression profiles of cell surface-associated proteins extracted with lysozyme (Fig. 2A). The major band that appeared around 16 kDa was identified as lysozyme by PMF (data not shown). On the
other hand, there was variation in the protein band profiles among the extracted proteins from the modified MRS
broth supplemented with the prebiotics (Fig. 2B). Although sufficient
amounts of proteins from GLC (35 µg) and LNB I (17 µg) were loaded onto the SDS-PAGE gel, the results showed no
visible bands. This is likely because the major parts of these fractions were contaminated by other biological
compounds such as nucleic acids and small peptides, which resulted in UV absorbance at 280 nm. On the other hand,
4 protein bands at most were seen in the expression profiles for BM, BOS, DFA III, FOSs, GOSs, and RAF. These
bands were very faint in the expression profiles for BOS and GOS, implying that the expression levels of these
proteins were enhanced under starved conditions in BM, DFA III, RAF, and FOSs. Among the four protein bands, two
were successfully identified by PMF (Fig. 3). Band 2, indicated by an arrowhead in Fig. 2B, was identified as
an ATP-binding cassette transporter substrate-binding protein (ABC-SBP) (gi:636738117). Also, band 3 turned out to
be glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (gi:511645614). As a result of MS/MS analysis, band 4 was
suspected to be a partial fragment of ABC-SBP (gi:229312913) with a probability-based MOWSE score of 38, which was
lower than the threshold value for significance of 42 (data not shown). ABC-SBPs associate with ABC transporters,
which are membrane proteins that translocate a wide variety of molecules, including sugars, amino acids, lipids,
metabolites, and drugs, across the cellular membrane [17]. ABC-SBPs bind
ligands with high affinity and deliver them to the transmembrane domain of ABC transporters. According to the
annotation of ABC-SBP (gi:636738117) in the database of the National Center for Biotechnology Information
(http://www.ncbi.nlm.nih.gov/), it contains a periplasmic component of the ABC-type sugar transport system,
strongly suggesting that this cell surface-associated protein is upregulated in response to carbohydrate
starvation. Watanabe et al. [18] reported that Lam29, which is an
adhesion-like protein of Lactobacillus mucosae ME-340 capable of binding to human blood group A
and B antigens, showed high similarity to an ABC-SBP from Lactobacillus fermentum IFO 3956. In
this context, the ABC-SBP of FSMM15 may function as an adhesin. Several proteins show multiple biological
functions when they are expressed in different cellular locations, and these proteins are referred to as
“moonlighting proteins” [19]. GAPDH is an enzyme involved in the glycolytic
pathway in cytoplasm; however, it is also known to moonlight as an adhesin with respect to carbohydrates when it
is present on or attached to the cell surface of many bacteria, including different strains of
Lactobacillus [20], Staphylococcus
[21], Candida [22], Streptococcus [23,24,25], and Listeria [26]. Therefore, GAPDH is also likely to be upregulated in response to
carbohydrate starvation. In L. casei, enolase and GAPDH identified on the bacterial cell surface
correlated with acid stress conditions [27], while in L.
rhamnosus, these proteins were identified on the bacterial cell surface in response to both heat and
acid stress conditions [28]. Furthermore, Nezhad et al. [27] demonstrated that lactobacilli strains rapidly modified their surface
properties by upregulation of these glycolytic enzymes in response to changes in pH. However, the molecular
mechanism of transport of moonlighting proteins onto the cell surface is still unclear. Cell viability of FSMM15
significantly decreased after lysozyme treatment under our experimental conditions, and hence it requires further
experiments to clarify the original localization of the extracted GAPDH.
Fig. 2.
Expression profiles of cell surface-associated proteins extracted with lysozyme (A) and LiCl (B) from
L. rhamnosus FSMM15 grown in the modified MRS broth supplemented with various
prebiotics.
M indicates molecular size markers. The extracted proteins loaded onto the gels were as follows: GLC (312
µg), BOS (431 µg), BM (391 µg), DFA III (440 µg), RAF (456 µg), FOSs (456 µg), GOSs (452 µg), and LNB I (452
µg) in panel A and GLC (35 µg), BOS (30 µg), BM (50 µg), DFA III (43 µg), RAF (38 µg), FOSs (41 µg), GOSs
(30 µg), and LNB I (17 µg) in panel B. Visible protein bands in panel B are indicated by arrowheads with
numbers on the left side of the bands.
Fig. 3.
PMF analyses of cell surface-associated proteins extracted with LiCl from L. rhamnosus
FSMM15
MS spectra obtained for bands 2 and 3, indicated by arrowheads in Fig.
2B, are shown in panels (A) and (B), respectively. MASCOT search results are indicated as insets in
the figure. Band 2 was identified as ATP-binding cassette transporter substrate-binding protein
(gi:636738117) with a probability-based MOWSE score of 85. Band 3 was identified as
glyceraldehyde-3-phosphate dehydrogenase (gi:511645614) with a probability-based MOWSE score of 93. The
threshold value for significance was 82 (p<0.05). One-letter representations of assigned amino acid
sequences and their monoisotopic masses are shown in the figure. Amino acid residue numbers from the
starting methionine are indicated as superscripts in the sequences.
Expression profiles of cell surface-associated proteins extracted with lysozyme (A) and LiCl (B) from
L. rhamnosus FSMM15 grown in the modified MRS broth supplemented with various
prebiotics.M indicates molecular size markers. The extracted proteins loaded onto the gels were as follows: GLC (312
µg), BOS (431 µg), BM (391 µg), DFA III (440 µg), RAF (456 µg), FOSs (456 µg), GOSs (452 µg), and LNB I (452
µg) in panel A and GLC (35 µg), BOS (30 µg), BM (50 µg), DFA III (43 µg), RAF (38 µg), FOSs (41 µg), GOSs
(30 µg), and LNB I (17 µg) in panel B. Visible protein bands in panel B are indicated by arrowheads with
numbers on the left side of the bands.PMF analyses of cell surface-associated proteins extracted with LiCl from L. rhamnosus
FSMM15MS spectra obtained for bands 2 and 3, indicated by arrowheads in Fig.
2B, are shown in panels (A) and (B), respectively. MASCOT search results are indicated as insets in
the figure. Band 2 was identified as ATP-binding cassette transporter substrate-binding protein
(gi:636738117) with a probability-based MOWSE score of 85. Band 3 was identified as
glyceraldehyde-3-phosphate dehydrogenase (gi:511645614) with a probability-based MOWSE score of 93. The
threshold value for significance was 82 (p<0.05). One-letter representations of assigned amino acid
sequences and their monoisotopic masses are shown in the figure. Amino acid residue numbers from the
starting methionine are indicated as superscripts in the sequences.In conclusion, the results of this study unraveled favorable prebiotics for the potential probiotic L.
rhamnosus FSMM15. L. rhamnosus FSMM15 preferred milk-related prebiotics, GOSs and LNB
I, rather than plant-origin prebiotics, DFA III, FOSs, and RAF. Prebiotic supplementation had little effect on the
variation of cell surface-associated proteins of FSMM15, whereas energetically starved conditions enhanced the
expression levels of ABC-SBP and GAPDH, which were most likely expressed on the cell-surface to promote the chance
to capture carbohydrates in the surrounding area. Therefore, GOSs or LNB I consumption is unlikely to have an
influence on the interaction between FSMM15 and its host via cell surface-associated proteins.We cordially appreciate Dr. Mamoru Nishimoto and Dr. Motomitsu Kitaoka at the National Food Research Institute,
Japan, for their kind gift of LNB I. We are highly grateful to Dr. Kazumasa Kimura at Yakult Central Institute,
Japan, for his kind gift of GOSs (Oligomate-55NP). We are also highly grateful to Dr. Hiroyuki Ito at Meiji
Dairies Corporation Food Science Institute, Japan, for his kind gift of FOSs (Meioligo P). Dr. Dai Mikumo at
Nippon BeetSugar Manufacturing, Japan, is highly appreciated for his kind gifts of BOS, DFA III, and RAF.
Authors: Maarten van de Guchte; Pascale Serror; Christian Chervaux; Tamara Smokvina; Stanislav D Ehrlich; Emmanuelle Maguin Journal: Antonie Van Leeuwenhoek Date: 2002-08 Impact factor: 2.271