Literature DB >> 26851381

Moving towards personalised therapy in head and neck squamous cell carcinoma through analysis of next generation sequencing data.

M Giefing1, M Wierzbicka2, K Szyfter3, J C Brenner4, B J Braakhuis5, R H Brakenhoff5, C R Bradford6, J A Sorensen7, A Rinaldo8, J P Rodrigo9, R P Takes10, A Ferlito11.   

Abstract

Personalised medicine tumour boards, which leverage genomic data to improve clinical management, are becoming standard for the treatment of many cancers. This paper is designed as a primer to assist clinicians treating head and neck squamous cell carcinoma (HNSCC) patients with an understanding of the discovery and functional impact of recurrent genetic lesions that are likely to influence the management of this disease in the near future. This manuscript integrates genetic data from publicly available array comparative genome hybridization (aCGH) and next-generation sequencing genetics databases to identify the most common molecular alterations in HNSCC. The importance of these genetic discoveries is reviewed and how they may be incorporated into clinical care decisions is discussed. Considerations for the role of genetic stratification in the clinical management of head and neck cancer are maturing rapidly and can be improved by integrating data sets. This article is meant to summarise the discoveries made using multiple genomic platforms so that the head and neck cancer care provider can apply these discoveries to improve clinical care.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Genetic complexity; HNSCC; NGS technology; Personalised medicine; Target genes; Tumour heterogeneity

Mesh:

Substances:

Year:  2016        PMID: 26851381      PMCID: PMC4761501          DOI: 10.1016/j.ejca.2015.10.070

Source DB:  PubMed          Journal:  Eur J Cancer        ISSN: 0959-8049            Impact factor:   9.162


  79 in total

Review 1.  Diagnostic and prognostic value of circulating tumor-related DNA in cancer patients.

Authors:  Diego M Marzese; Hajime Hirose; Dave S B Hoon
Journal:  Expert Rev Mol Diagn       Date:  2013-10-16       Impact factor: 5.225

2.  Adverse events associated with concurrent chemoradiation therapy in patients with head and neck cancer.

Authors:  Daniel J Givens; Lucy Hynds Karnell; Anjali K Gupta; Gerald H Clamon; Nitin A Pagedar; Kristi E Chang; Douglas J Van Daele; Gerry F Funk
Journal:  Arch Otolaryngol Head Neck Surg       Date:  2009-12

Review 3.  A genetic explanation of Slaughter's concept of field cancerization: evidence and clinical implications.

Authors:  Boudewijn J M Braakhuis; Maarten P Tabor; J Alain Kummer; C René Leemans; Ruud H Brakenhoff
Journal:  Cancer Res       Date:  2003-04-15       Impact factor: 12.701

4.  Mutant allele tumor heterogeneity (MATH) and head and neck squamous cell carcinoma.

Authors:  James W Rocco
Journal:  Head Neck Pathol       Date:  2015-03-25

5.  Squamous cell carcinoma of the oral tongue in young non-smokers is genomically similar to tumors in older smokers.

Authors:  Curtis R Pickering; Jiexin Zhang; David M Neskey; Mei Zhao; Samar A Jasser; Jiping Wang; Alexandra Ward; C Jillian Tsai; Marcus V Ortega Alves; Jane H Zhou; Jennifer Drummond; Adel K El-Naggar; Richard Gibbs; John N Weinstein; David A Wheeler; Jing Wang; Mitchell J Frederick; Jeffrey N Myers
Journal:  Clin Cancer Res       Date:  2014-05-29       Impact factor: 12.531

6.  Randomized, controlled phase II study of post-surgery radiotherapy combined with recombinant adenoviral human p53 gene therapy in treatment of oral cancer.

Authors:  S Liu; P Chen; M Hu; Y Tao; L Chen; H Liu; J Wang; J Luo; G Gao
Journal:  Cancer Gene Ther       Date:  2013-05-31       Impact factor: 5.987

Review 7.  Combining array-based approaches for the identification of candidate tumor suppressor loci in mature lymphoid neoplasms.

Authors:  Inga Nieländer; Stefanie Bug; Julia Richter; Maciej Giefing; José Ignacio Martín-Subero; Reiner Siebert
Journal:  APMIS       Date:  2007-10       Impact factor: 3.205

Review 8.  Intratumor heterogeneity: evolution through space and time.

Authors:  Charles Swanton
Journal:  Cancer Res       Date:  2012-09-20       Impact factor: 12.701

Review 9.  The AID/APOBEC family of nucleic acid mutators.

Authors:  Silvestro G Conticello
Journal:  Genome Biol       Date:  2008-06-17       Impact factor: 13.583

10.  Genetic classification of oral and oropharyngeal carcinomas identifies subgroups with a different prognosis.

Authors:  Serge J Smeets; Ruud H Brakenhoff; Bauke Ylstra; Wessel N van Wieringen; Mark A van de Wiel; C René Leemans; Boudewijn J M Braakhuis
Journal:  Cell Oncol       Date:  2009       Impact factor: 6.730

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  17 in total

Review 1.  Head and Neck Squamous Cell Carcinoma Detection and Surveillance: Advances of Liquid Biomarkers.

Authors:  Paul L Swiecicki; Julia R Brennan; Michelle Mierzwa; Matthew E Spector; J Chad Brenner
Journal:  Laryngoscope       Date:  2018-12-20       Impact factor: 3.325

Review 2.  Targeting the Wnt/beta-catenin pathway in cancer: Update on effectors and inhibitors.

Authors:  Nithya Krishnamurthy; Razelle Kurzrock
Journal:  Cancer Treat Rev       Date:  2017-11-13       Impact factor: 12.111

3.  Rationale for Using Irreversible Epidermal Growth Factor Receptor Inhibitors in Combination with Phosphatidylinositol 3-Kinase Inhibitors for Advanced Head and Neck Squamous Cell Carcinoma.

Authors:  Nicole L Michmerhuizen; Elizabeth Leonard; Chloe Matovina; Micah Harris; Gabrielle Herbst; Aditi Kulkarni; Jingyi Zhai; Hui Jiang; Thomas E Carey; J Chad Brenner
Journal:  Mol Pharmacol       Date:  2019-03-11       Impact factor: 4.436

4.  The genomic landscape of UM-SCC oral cavity squamous cell carcinoma cell lines.

Authors:  Megan L Ludwig; Aditi Kulkarni; Andrew C Birkeland; Nicole L Michmerhuizen; Susan K Foltin; Jacqueline E Mann; Rebecca C Hoesli; Samantha N Devenport; Brittany M Jewell; Andrew G Shuman; Matthew E Spector; Thomas E Carey; Hui Jiang; J Chad Brenner
Journal:  Oral Oncol       Date:  2018-11-08       Impact factor: 5.337

5.  Pathogenetic Analysis of Sinonasal Teratocarcinosarcomas Reveal Actionable β-catenin Overexpression and a β-catenin Mutation.

Authors:  Andrew C Birkeland; Sarah J Burgin; Megan Yanik; Megan V Scott; Carol R Bradford; Jonathan B McHugh; Scott A McLean; Stephen E Sullivan; Jacques E Nor; Erin L McKean; J Chad Brenner
Journal:  J Neurol Surg B Skull Base       Date:  2017-03-27

Review 6.  Precision Therapy of Head and Neck Squamous Cell Carcinoma.

Authors:  P J Polverini; N J D'Silva; Y L Lei
Journal:  J Dent Res       Date:  2018-04-12       Impact factor: 6.116

Review 7.  Comprehending the crosstalk between Notch, Wnt and Hedgehog signaling pathways in oral squamous cell carcinoma - clinical implications.

Authors:  Anjali P Patni; M K Harishankar; Joel P Joseph; Bhuvanadas Sreeshma; Rama Jayaraj; Arikketh Devi
Journal:  Cell Oncol (Dordr)       Date:  2021-03-11       Impact factor: 6.730

Review 8.  Oral cancer: changing the aim of the biopsy in the age of precision medicine. A review.

Authors:  Roberto Bruschini; Fausto Maffini; Fausto Chiesa; Daniela Lepanto; Rita De Berardinis; Francesco Chu; Marta Tagliabue; Gioacchino Giugliano; Mohssen Ansarin
Journal:  Acta Otorhinolaryngol Ital       Date:  2021-04       Impact factor: 2.124

9.  The molecular landscape of the University of Michigan laryngeal squamous cell carcinoma cell line panel.

Authors:  Jacqueline E Mann; Aditi Kulkarni; Andrew C Birkeland; Judy Kafelghazal; Julia Eisenberg; Brittany M Jewell; Megan L Ludwig; Matthew E Spector; Hui Jiang; Thomas E Carey; J Chad Brenner
Journal:  Head Neck       Date:  2019-05-15       Impact factor: 3.821

Review 10.  A Next-Generation Sequencing Primer-How Does It Work and What Can It Do?

Authors:  Yuriy O Alekseyev; Roghayeh Fazeli; Shi Yang; Raveen Basran; Thomas Maher; Nancy S Miller; Daniel Remick
Journal:  Acad Pathol       Date:  2018-05-06
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