| Literature DB >> 26848675 |
Hsin-I Hsiao1, Man-Ser Jan2, Hui-Ju Chi3.
Abstract
This study aimed to investigate and quantify the relationship between climate variation and incidence of Vibrio parahaemolyticus in Taiwan. Specifically, seasonal autoregressive integrated moving average (ARIMA) models (including autoregression, seasonality, and a lag-time effect) were employed to predict the role of climatic factors (including temperature, rainfall, relative humidity, ocean temperature and ocean salinity) on the incidence of V. parahaemolyticus in Taiwan between 2000 and 2011. The results indicated that average temperature (+), ocean temperature (+), ocean salinity of 6 months ago (+), maximum daily rainfall (current (-) and one month ago (-)), and average relative humidity (current and 9 months ago (-)) had significant impacts on the incidence of V. parahaemolyticus. Our findings offer a novel view of the quantitative relationship between climate change and food poisoning by V. parahaemolyticus in Taiwan. An early warning system based on climate change information for the disease control management is required in future.Entities:
Keywords: Taiwan; Vibrio parahaemolyticus; climate; food poisoning; outbreak; variability
Mesh:
Year: 2016 PMID: 26848675 PMCID: PMC4772208 DOI: 10.3390/ijerph13020188
Source DB: PubMed Journal: Int J Environ Res Public Health ISSN: 1660-4601 Impact factor: 3.390
Top five pathogens and foods in food poisoning cases from 2000 to 2011 in Taiwan a.
| 2000 | 2001 | 2002 | 2003 | 2004 | 2005 | 2006 | 2007 | 2008 | 2009 | 2010 | 2011 | Total | ||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Top 5 | Pathogens | |||||||||||||
| 1 | 84 | 52 | 86 | 82 | 64 | 62 | 58 | 38 | 52 | 61 | 60 | 52 | 751 | |
| 2 | 22 | 9 | 18 | 7 | 8 | 12 | 18 | 23 | 14 | 30 | 41 | 27 | 229 | |
| 3 | 5 | 8 | 4 | 11 | 7 | 9 | 10 | 7 | 12 | 11 | 46 | 36 | 166 | |
| 4 | 9 | 9 | 6 | 11 | 8 | 7 | 8 | 11 | 14 | 22 | 27 | 11 | 143 | |
| 5 | Pathogenic | 1 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 1 | 10 | 11 | 16 | 42 |
| Top 5 | Food | |||||||||||||
| 1 | Seafood | 8 | 5 | 15 | 8 | 6 | 7 | 7 | 4 | 10 | 4 | 12 | 23 | 109 |
| 2 | Meat | 2 | 0 | 3 | 4 | 0 | 2 | 4 | 6 | 2 | 3 | 5 | 2 | 33 |
| 3 | Cereal | 2 | 2 | 2 | 0 | 0 | 5 | 7 | 5 | 2 | 2 | 1 | 4 | 32 |
| 4 | Vegetable | 1 | 2 | 1 | 1 | 8 | 2 | 2 | 1 | 0 | 0 | 5 | 7 | 30 |
| 5 | Bakery and confectionary | 3 | 3 | 0 | 0 | 2 | 0 | 1 | 0 | 2 | 4 | 4 | 1 | 20 |
| Total of food poisoning outbreaks b | 208 | 178 | 262 | 251 | 274 | 247 | 265 | 248 | 272 | 351 | 503 | 426 | 3485 |
a Adapted from food-borne disease data (in Chinese) published by Taiwan Food and Drug Administration [2]; b Total of food poisoning outbreaks covered all pathogens, natural toxins and chemicals.
Pearson correlation coefficients between variables, N = 144.
| Variable | Avgtemp a | Maxtemp | Mintemp | Avgrf | Maxrfd | Avgrh | Maxrh | Minrh | Octemp | Ocsant |
|---|---|---|---|---|---|---|---|---|---|---|
| avgtemp | 1.0000 | |||||||||
| maxtemp | 0.9971 *** b | 1.0000 | ||||||||
| mintemp | 0.9978 *** | 0.9901 *** | 1.0000 | |||||||
| avgrf | 0.5261 *** | 0.4889 *** | 0.5516 *** | 1.0000 | ||||||
| maxrfd | 0.5577 *** | 0.5252 *** | 0.5791 *** | 0.9410 *** | 1.0000 | |||||
| avgrh | 0.4417 *** | 0.4320 *** | 0.4487 *** | 0.4498 *** | 0.3371 *** | 1.0000 | ||||
| maxrh | 0.2354 *** | 0.2590 *** | 0.2127 ** | 0.1253 | 0.0678 | 0.7315 *** | 1.0000 | |||
| minrh | 0.5781 *** | 0.5517 *** | 0.6023 *** | 0.5403 *** | 0.4856 *** | 0.7423 *** | 0.3601 *** | 1.0000 | ||
| octemp | 0.0956 | 0.1003 | 0.0913 | 0.0875 | 0.1070 | 0.1498 * | 0.1438 * | 0.0963 | 1.0000 | |
| ocsant | −0.2152 *** | −0.2096 ** | −0.2167 *** | −0.1933 ** | −0.2136 ** | −0.1204 | −0.0384 | −0.1721 | −0.4668 *** | 1.0000 |
| outbreak | 0.2675 *** | 0.2674 *** | 0.2700 *** | 0.1174 | 0.1402 * | 0.0639 | −0.0377 | 0.1273 | 0.1938 ** | −0.0064 |
a Average temperature (avgtemp), maximum temperature (maxtemp), minimum temperature (mintemp), average rainfall (avgrf), maximum daily rain fall (maxrfd), average maximum relative humidity (maxrh), minimum relative humidity (minrh), ocean temperature (octemp), and ocean salinity (ocsant); b *, ** and *** indicate significance at the 10%, 5%, and 1% level of probability, respectively.
The average, maximum and minimum values of outbreak variable and climatic variables by month from 2000–2011.
| Variable (Unit) | January | February | March | April | May | June | July | August | September | October | November | December | Average | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| outbreaks (people) | avg | 22.2 | 1.3 | 5.3 | 10.5 | 49.6 | 29.4 | 44.7 | 28.5 | 105.6 | 7.8 | 15.7 | 2.2 | 26.9 |
| max | 219 | 7 | 53 | 70 | 125 | 114 | 101 | 86 | 497 | 26 | 82 | 12 | 76.9 | |
| min | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 10.4 | |
| avgtemp (°C) | avg | 15.4 | 16.5 | 17.9 | 20.9 | 23.6 | 25.2 | 26.4 | 26.3 | 25.2 | 22.9 | 20.3 | 17 | 21.4 |
| max | 16.7 | 19.4 | 19.4 | 22.2 | 24.8 | 26.4 | 27.9 | 27.2 | 26.9 | 24.4 | 21.6 | 18.3 | 22.2 | |
| min | 13.6 | 13.9 | 16.1 | 18.7 | 20.9 | 22.9 | 23.4 | 23 | 22.1 | 20.4 | 17.2 | 15.4 | 19.3 | |
| maxrfd (mm) | avg | 27.7 | 28.7 | 29.2 | 37.7 | 62.9 | 102.4 | 121.4 | 119.9 | 127.2 | 83.1 | 56.9 | 35.8 | 69.4 |
| max | 54.6 | 52.4 | 46.9 | 66.2 | 104.9 | 186.4 | 232.9 | 307.3 | 303.4 | 180.7 | 150.2 | 103.3 | 91.4 | |
| min | 17.1 | 19.2 | 17 | 8.6 | 19.4 | 37.1 | 27 | 43.5 | 36.7 | 15.2 | 17.3 | 9.2 | 46.8 | |
| avgrh (%) | avg | 75.3 | 77 | 75.4 | 76.9 | 77.3 | 79.1 | 77.2 | 78.3 | 78.1 | 75.3 | 75.5 | 73.7 | 76.6 |
| max | 80.6 | 83.1 | 79.9 | 81.6 | 81.9 | 82.5 | 80.5 | 82.5 | 82.2 | 79.7 | 81.1 | 79 | 78.8 | |
| min | 69.3 | 70.6 | 66.7 | 72.9 | 69.6 | 72.5 | 72 | 71 | 69.6 | 69.6 | 65.1 | 69 | 70.9 | |
| octemp (°C) | avg | 19.8 | 19.8 | 19.9 | 19.7 | 19.5 | 20.8 | 20 | 20.4 | 21.2 | 19.1 | 19.8 | 20 | 20.0 |
| max | 26.3 | 24.2 | 23 | 24.2 | 23.1 | 28 | 27.7 | 28.1 | 29.1 | 22.3 | 25.4 | 24.5 | 23.2 | |
| min | 15 | 15.8 | 17.1 | 15.1 | 11.9 | 16 | 12.2 | 12.4 | 11.9 | 13.5 | 15.8 | 17 | 17.2 | |
| ocsant (psu) | avg | 34.2 | 34.1 | 34.3 | 34 | 34.3 | 34.1 | 33.5 | 33.7 | 34 | 34.1 | 34.2 | 34.3 | 34.1 |
| max | 34.5 | 34.7 | 34.6 | 34.6 | 34.5 | 34.5 | 34.4 | 34.6 | 34.5 | 34.6 | 34.5 | 34.5 | 34.5 | |
| min | 33.3 | 33.1 | 33.1 | 33.1 | 33.1 | 32.3 | 27.6 | 30.6 | 33.1 | 33.5 | 33.9 | 33.9 | 32.7 | |
Figure 1Dashed red line: Monthly incidence of Vibrio parahaemolyticus outbreaks in Taiwan from January 2000 to December 2011 compared to climatic variables for the same period: (A) average temperature (AVGTEMP); (B) Maximum daily rainfall (MAXRFD); (C) average relative humidity (AVGRH); (D) average ocean temperature (OCTEMP); (E) average ocean salinity (OCSANT).
The Augmented Dickey-Fuller Unit Root Tests for outbreaks.
| Type | ||
|---|---|---|
| zero mean without trend | −9.20254 | 0.0000 |
| single mean without trend | −10.8712 | 0.0000 |
| single mean with trend | −11.18945 | 0.0000 |
a MacKinnon [31] one-sided p-values.
Figure 2The acf and pacf of original time-series: Vibrio parahaemolyticus outbreaks. Gray area represents the two standard error limits; (a) the acf pattern; (b) the pacf pattern.
Figure 3The acf and pacf pattern (3(A); 3(B); 3(C); and 3(D)) for residuals of ARIMA(1,0,0)12, ARIMA(0,0,1)12, ARIMA(1,0,1)12, and ARIMA(1,0,0) × (1,0,1)12, respectively. Gray area represents the two standard error limits.
The estimation results of ARIMA model for Vibrio parahaemolyticus outbreak series: univariate models b.
| Variable | ARIMA(1,0,0)12 a | ARIMA(0,0,1)12 | ARIMA(1,0,1)12 | ARIMA(1,0,0) × (1,0,1)12 |
|---|---|---|---|---|
| Intercept | 24.5430 *** b | 26.4550 *** | 8.4141 *** | 14.9992 |
| AR at lag1 | 0.0636 | |||
| AR at lag 12 | 0.3826 *** | 0.7526 *** | 0.7995 *** | |
| AR at lag 13 | −0.0473 | |||
| MA at lag 12 | 0.3790 *** | −0.6836 | −0.6372 *** | |
| AIC | 10.8494 | 10.8170 | 10.7066 | 10.7647 |
| RMSE | 54.0868 | 53.2847 | 49.7958 | 50.3811 |
a The four univariate models can be represented as follows: model#1, ARIMA(1,0,0)12 : (1 − Φ12)y = u + ε, model #2, ARIMA(0,0,1)12 : y + (1 + ΘB12) ε, model #3, ARIMA(1,0,1)12 : (1 − Φ12)y = u + (1 + ΘB12)ε, model #4, ARIMA(1,0,0) × (1,0,1)12: (1 − Φ12)(1 − ϕB)y = u + (1 + ΘB12)ε. where, y is outbreak; ε is a white noise process; u is intercept; Φ, Θ and ϕ are estimate parameters, and B is lag (or back) operator; b *** indicate significance at the 1% level of probability, respectively.
Figure 4The cross-correlation coefficients of V. parahaemolyticus outbreaks with climatic variables: avgtemp, avgrh, maxrfd, octemp, and ocsant in Taiwan, 2000–2011. Gray area represents the two standard error limits.
The estimation results of ARIMA(1,0,1)12 for Vibrio parahaemolyticus outbreak series with climatic variables: Covariate models.
| Variable | Covariate #1 | Covariate #2 | Covariate #3 | Covariate #4 |
|---|---|---|---|---|
| Intercept | −344.9471 | −368.2690 | −364.3913 * | −310.1019 |
| AR at lag 12 | 0.3518 *** a | −0.0211 | ||
| MA at lag 12 | 0.3230 *** | 0.5153 *** | ||
| avgtemp | 3.8521 ** | 4.7055 *** | 2.3822 | 3.5590 *** |
| avgtemp at lag1 | 2.2843 | |||
| maxrfd | −0.1022 | −0.1630 * | −0.1401 * | −0.0151 |
| maxrfd at lag1 | −0.1307 | −0.1368 * | −0.1682 ** | −0.1734 ** |
| avgrh | 1.1641 | 1.2892 | 1.2607 | 0.9559 |
| avgrh at lag9 | −4.2791 *** | −3.7936 *** | −4.0850 *** | −4.5770 *** |
| octemp | 4.7350 *** | 4.1967 *** | 4.4053 *** | 4.5140 *** |
| ocsant at lag6 | 13.0870 ** | 12.2781 ** | 12.8271 ** | 13.4580 *** |
| AIC | 10.8543 | 10.8054 | 10.7346 | 10.5413 |
| RMSE | 51.8809 | 54.5196 | 51.3805 | 48.5625 |
a *, ** and *** indicate significance at the 10%, 5%, and 1% level of probability, respectively.