Literature DB >> 26848019

Precision Medicine: Personalized Proteomics for the Diagnosis and Treatment of Idiopathic Inflammatory Disease.

Gabriel Velez1, C Nathaniel Roybal2, Diana Colgan2, Stephen H Tsang3, Alexander G Bassuk4, Vinit B Mahajan2.   

Abstract

IMPORTANCE: To better characterize posterior uveitis, vitreous samples from 15 patients were subjected to antibody arrays, and the expression levels of 200 human cytokines were evaluated. Expression was analyzed by 1-way analysis of variance (significance at P < .01), unsupervised cluster algorithm, and pathway analysis. OBSERVATIONS: Unbiased clustering of patients, based on their cytokine expression profile, suggested that particular protein networks and molecular pathways are altered in various forms of uveitis. Expression of interleukin 23 (IL-23), IL-1 receptor I (IL-1RI), IL-17R, tissue inhibitors of metalloproteinase 1 and 2 (TIMP-1 and TIMP-2), insulinlike growth factor-binding protein 2 (IGFBP-2), nerve growth factor (b-NGF), platelet-derived growth factor receptor β polypeptide (PDGFRb), bone morphogenic protein 4 (BMP-4), and stem cell factor (SCF) constituted a common cytokine signature in the vitreous of patients with uveitis. In 1 patient with progressive, idiopathic visual loss, this last-line analysis implicated retinal autoimmunity, a diagnosis that was validated when her serum sample was found to contain antibodies to S-arrestin, a retinal protein and potent cause of autoimmune retinal degeneration. CONCLUSIONS AND RELEVANCE: The analysis identifies a common cytokine signature for posterior uveitis and guides the diagnosis of a patient with idiopathic uveitis. Personalized treatment reversed the visual loss, illustrating how proteomic tools may individualize therapy.

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Year:  2016        PMID: 26848019      PMCID: PMC4833518          DOI: 10.1001/jamaophthalmol.2015.5934

Source DB:  PubMed          Journal:  JAMA Ophthalmol        ISSN: 2168-6165            Impact factor:   7.389


  15 in total

1.  Investigation and management of uveitis.

Authors:  Catherine M Guly; John V Forrester
Journal:  BMJ       Date:  2010-10-13

Review 2.  Historical insights into cytokines.

Authors:  Charles A Dinarello
Journal:  Eur J Immunol       Date:  2007-11       Impact factor: 5.532

3.  Changes in matrix metalloproteinase network in a spontaneous autoimmune uveitis model.

Authors:  Florian Hofmaier; Stefanie M Hauck; Barbara Amann; Roxane L Degroote; Cornelia A Deeg
Journal:  Invest Ophthalmol Vis Sci       Date:  2011-04-08       Impact factor: 4.799

Review 4.  Cytokines and chemokines in uveitis: is there a correlation with clinical phenotype?

Authors:  Kenneth G-J Ooi; Grazyna Galatowicz; Virginia L Calder; Susan L Lightman
Journal:  Clin Med Res       Date:  2006-12

5.  Urinary proteomics evaluation in interstitial cystitis/painful bladder syndrome: a pilot study.

Authors:  Young Ah Goo; Yihsuan S Tsai; Alvin Y Liu; David R Goodlett; Claire C Yang
Journal:  Int Braz J Urol       Date:  2010 Jul-Aug       Impact factor: 1.541

Review 6.  Autoimmune retinopathy: a review and summary.

Authors:  John R Heckenlively; Henry A Ferreyra
Journal:  Semin Immunopathol       Date:  2008-04-12       Impact factor: 9.623

7.  World Medical Association Declaration of Helsinki: ethical principles for medical research involving human subjects.

Authors: 
Journal:  JAMA       Date:  2013-11-27       Impact factor: 56.272

8.  Urinary metabolite profiling combined with computational analysis predicts interstitial cystitis-associated candidate biomarkers.

Authors:  He Wen; Tack Lee; Sungyong You; Soo-Hwan Park; Hosook Song; Karyn S Eilber; Jennifer T Anger; Michael R Freeman; Sunghyouk Park; Jayoung Kim
Journal:  J Proteome Res       Date:  2014-11-18       Impact factor: 4.466

9.  Gene expression of IGF1, IGF1R, and IGFBP3 in epiretinal membranes of patients with proliferative diabetic retinopathy: preliminary study.

Authors:  Dorota Romaniuk; Malgorzata W Kimsa; Barbara Strzalka-Mrozik; Magdalena C Kimsa; Adam Kabiesz; Wanda Romaniuk; Urszula Mazurek
Journal:  Mediators Inflamm       Date:  2013-11-28       Impact factor: 4.711

10.  Identification of psoriatic arthritis mediators in synovial fluid by quantitative mass spectrometry.

Authors:  Daniela Cretu; Ioannis Prassas; Punit Saraon; Ihor Batruch; Rajiv Gandhi; Eleftherios P Diamandis; Vinod Chandran
Journal:  Clin Proteomics       Date:  2014-07-01       Impact factor: 3.988

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  28 in total

1.  An Update on Treatment of Pediatric Chronic Non-Infectious Uveitis.

Authors:  Arjun B Sood; Sheila T Angeles-Han
Journal:  Curr Treatm Opt Rheumatol       Date:  2017-01-29

Review 2.  Cytokines in uveitis.

Authors:  Jessica E Weinstein; Kathryn L Pepple
Journal:  Curr Opin Ophthalmol       Date:  2018-05       Impact factor: 3.761

3.  Therapeutic drug repositioning using personalized proteomics of liquid biopsies.

Authors:  Gabriel Velez; Alexander G Bassuk; Diana Colgan; Stephen H Tsang; Vinit B Mahajan
Journal:  JCI Insight       Date:  2017-12-21

Review 4.  The Human Eye Proteome Project: Updates on an Emerging Proteome.

Authors:  Meleha T Ahmad; Pingbo Zhang; Craig Dufresne; Luigi Ferrucci; Richard D Semba
Journal:  Proteomics       Date:  2018-03       Impact factor: 3.984

Review 5.  Targeting Interleukin-23 in the Treatment of Noninfectious Uveitis.

Authors:  Kathryn L Pepple; Phoebe Lin
Journal:  Ophthalmology       Date:  2018-07-04       Impact factor: 12.079

6.  Dissection of Human Retina and RPE-Choroid for Proteomic Analysis.

Authors:  Thiago Cabral; Marcus A Toral; Gabriel Velez; James E DiCarlo; Anuradha M Gore; MaryAnn Mahajan; Stephen H Tsang; Alexander G Bassuk; Vinit B Mahajan
Journal:  J Vis Exp       Date:  2017-11-12       Impact factor: 1.355

7.  Association between uveitis and psoriatic disease: a systematic review and Meta-analysis based on the evidence from cohort studies.

Authors:  Chao-Ran Li; Lang Chen; Long-Fei Wang; Bin Yan; You-Ling Liang; Jing Luo
Journal:  Int J Ophthalmol       Date:  2020-04-18       Impact factor: 1.779

8.  Review of applications of high-throughput sequencing in personalized medicine: barriers and facilitators of future progress in research and clinical application.

Authors:  Gaye Lightbody; Valeriia Haberland; Fiona Browne; Laura Taggart; Huiru Zheng; Eileen Parkes; Jaine K Blayney
Journal:  Brief Bioinform       Date:  2019-09-27       Impact factor: 11.622

9.  Personalized Proteomics in Proliferative Vitreoretinopathy Implicate Hematopoietic Cell Recruitment and mTOR as a Therapeutic Target.

Authors:  C Nathaniel Roybal; Gabriel Velez; Marcus A Toral; Stephen H Tsang; Alexander G Bassuk; Vinit B Mahajan
Journal:  Am J Ophthalmol       Date:  2017-12-13       Impact factor: 5.258

Review 10.  miRNA Landscape in Pathogenesis and Treatment of Vogt-Koyanagi-Harada Disease.

Authors:  Fabian Vega-Tapia; Mario Bustamante; Rodrigo A Valenzuela; Cristhian A Urzua; Loreto Cuitino
Journal:  Front Cell Dev Biol       Date:  2021-05-10
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