Literature DB >> 26846616

Validating Eaton's Hypothesis: Cubane as a Benzene Bioisostere.

Benjamin A Chalmers1, Hui Xing1, Sevan Houston1, Charlotte Clark2, Sussan Ghassabian3, Andy Kuo3, Benjamin Cao4,5, Andrea Reitsma4,5, Cody-Ellen P Murray6, Jeanette E Stok1, Glen M Boyle7, Carly J Pierce7, Stuart W Littler4, David A Winkler4,8, Paul V Bernhardt1, Cielo Pasay7, James J De Voss1, James McCarthy7,9, Peter G Parsons7, Gimme H Walter6, Maree T Smith3, Helen M Cooper2, Susan K Nilsson4,5, John Tsanaktsidis10, G Paul Savage11, Craig M Williams12.   

Abstract

Pharmaceutical and agrochemical discovery programs are under considerable pressure to meet increasing global demand and thus require constant innovation. Classical hydrocarbon scaffolds have long assisted in bringing new molecules to the market place, but an obvious omission is that of the Platonic solid cubane. Eaton, however, suggested that this molecule has the potential to act as a benzene bioisostere. Herein, we report the validation of Eaton's hypothesis with cubane derivatives of five molecules that are used clinically or as agrochemicals. Two cubane analogues showed increased bioactivity compared to their benzene counterparts whereas two further analogues displayed equal bioactivity, and the fifth one demonstrated only partial efficacy. Ramifications from this study are best realized by reflecting on the number of bioactive molecules that contain a benzene ring. Substitution with the cubane scaffold where possible could revitalize these systems, and thus expedite much needed lead candidate identification.
© 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  agrochemicals; bioisosteres; cubane; pharmaceuticals; structure-activity relationships

Mesh:

Substances:

Year:  2016        PMID: 26846616     DOI: 10.1002/anie.201510675

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  13 in total

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Authors:  Jie Wang; Helena Lundberg; Shota Asai; Pedro Martín-Acosta; Jason S Chen; Stephen Brown; William Farrell; Russell G Dushin; Christopher J O'Donnell; Anokha S Ratnayake; Paul Richardson; Zhiqing Liu; Tian Qin; Donna G Blackmond; Phil S Baran
Journal:  Proc Natl Acad Sci U S A       Date:  2018-06-26       Impact factor: 11.205

2.  Evolution of abiotic cubane chemistries in a nucleic acid aptamer allows selective recognition of a malaria biomarker.

Authors:  Yee-Wai Cheung; Pascal Röthlisberger; Ariel E Mechaly; Patrick Weber; Fabienne Levi-Acobas; Young Lo; Alvin W C Wong; Andrew B Kinghorn; Ahmed Haouz; G Paul Savage; Marcel Hollenstein; Julian A Tanner
Journal:  Proc Natl Acad Sci U S A       Date:  2020-07-06       Impact factor: 11.205

3.  Synthesis of 1,3-Substituted Cyclobutanes by Allenoate-Alkene [2 + 2] Cycloaddition.

Authors:  Michael L Conner; M Kevin Brown
Journal:  J Org Chem       Date:  2016-08-25       Impact factor: 4.354

4.  Exploration of Alternative Scaffolds for P2Y14 Receptor Antagonists Containing a Biaryl Core.

Authors:  Young-Hwan Jung; Jinha Yu; Zhiwei Wen; Veronica Salmaso; Tadeusz P Karcz; Ngan B Phung; Zhoumou Chen; Sierra Duca; John M Bennett; Steven Dudas; Daniela Salvemini; Zhan-Guo Gao; Donald N Cook; Kenneth A Jacobson
Journal:  J Med Chem       Date:  2020-08-06       Impact factor: 7.446

5.  Phenyl bioisosteres in medicinal chemistry: discovery of novel γ-secretase modulators as a potential treatment for Alzheimer's disease.

Authors:  H Ratni; K Baumann; P Bellotti; X A Cook; L G Green; T Luebbers; M Reutlinger; A F Stepan; W Vifian
Journal:  RSC Med Chem       Date:  2021-04-12

6.  A novel vitamin K derived anticoagulant tolerant to genetic variations of vitamin K epoxide reductase.

Authors:  Xuejie Chen; Yizhou Liu; Natsuko Furukawa; Da-Yun Jin; G Paul Savage; Darrel W Stafford; Yoshitomo Suhara; Craig M Williams; Jian-Ke Tie
Journal:  J Thromb Haemost       Date:  2021-01-22       Impact factor: 5.824

7.  Synthesis of Gibberellic Acid Derivatives and Their Effects on Plant Growth.

Authors:  Hao Tian; Yiren Xu; Shaojin Liu; Dingsha Jin; Jianjun Zhang; Liusheng Duan; Weiming Tan
Journal:  Molecules       Date:  2017-04-26       Impact factor: 4.411

8.  Programmable synthesis of multiply arylated cubanes through C-H metalation and arylation.

Authors:  Ryo Okude; Genki Mori; Akiko Yagi; Kenichiro Itami
Journal:  Chem Sci       Date:  2020-04-24       Impact factor: 9.825

9.  Redox-Active Esters in Fe-Catalyzed C-C Coupling.

Authors:  Fumihiko Toriyama; Josep Cornella; Laurin Wimmer; Tie-Gen Chen; Darryl D Dixon; Gardner Creech; Phil S Baran
Journal:  J Am Chem Soc       Date:  2016-08-29       Impact factor: 15.419

10.  Synthesis and applications of highly functionalized 1-halo-3-substituted bicyclo[1.1.1]pentanes.

Authors:  Dimitri F J Caputo; Carlos Arroniz; Alexander B Dürr; James J Mousseau; Antonia F Stepan; Steven J Mansfield; Edward A Anderson
Journal:  Chem Sci       Date:  2018-05-21       Impact factor: 9.825

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