Literature DB >> 26843703

Development of a Specific Diagnostic System for Detecting Turnip Yellow Mosaic Virus from Chinese Cabbage in Korea.

S Lee1, J Y Rho2.   

Abstract

Turnip yellow mosaic virus (TYMV) is a plant pathogenic virus transmitted mainly through its host Brassica spp. TYMV is originated from Europe. Its infection cases have been reported in Australia, Brazil, Turkey, and Japan. Symptoms similar to those of TYMV infections were also reported in Korea in 2012. In this study, we developed RT-PCR primer pairs that were highly sensitive for detecting TYMV. The developed RT-PCR primer pairs offered about 10-100 times stronger detection sensitivity compared to primer pairs previously used in Korea. As a result, a 491 bp TYMV-specific band was identified. The specific band was confirmed to be TYMV based on sequencing results and phylogenetic analysis. The RT-PCR primer pairs developed in this study can be used to rapidly and precisely diagnose TYMV in agricultural products such as Chinese cabbage and other crops infected by TYMV.

Entities:  

Keywords:  Chinese cabbage; RT-PCR; TYMV; Turnip yellow mosaic virus

Year:  2015        PMID: 26843703      PMCID: PMC4729751          DOI: 10.1007/s12088-015-0557-1

Source DB:  PubMed          Journal:  Indian J Microbiol        ISSN: 0046-8991            Impact factor:   2.461


  12 in total

1.  Phylogenetic analysis of Bacillus subtilis and related taxa based on partial gyrA gene sequences.

Authors:  J Chun; K S Bae
Journal:  Antonie Van Leeuwenhoek       Date:  2000-08       Impact factor: 2.271

2.  Translation of turnip yellow mosaic virus RNA in vitro: a closed and an open coat protein cistron.

Authors:  C W Pleij; A Neeleman; L van Vloten-Doting; L Bosch
Journal:  Proc Natl Acad Sci U S A       Date:  1976-12       Impact factor: 11.205

3.  MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.

Authors:  Koichiro Tamura; Glen Stecher; Daniel Peterson; Alan Filipski; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2013-10-16       Impact factor: 16.240

4.  Assembly of turnip yellow mosaic virus replication complexes: interaction between the proteinase and polymerase domains of the replication proteins.

Authors:  Anna Jakubiec; Julien Notaise; Vincent Tournier; François Héricourt; Maryse A Block; Gabrièle Drugeon; Linda van Aelst; Isabelle Jupin
Journal:  J Virol       Date:  2004-08       Impact factor: 5.103

5.  Nucleotide sequence comparisons of turnip yellow mosaic virus isolates from Australia and Europe.

Authors:  J Blok; A Mackenzie; P Guy; A Gibbs
Journal:  Arch Virol       Date:  1987       Impact factor: 2.574

6.  Evaluation of Seed Transmission of Turnip yellow mosaic virus and Tobacco mosaic virus in Arabidopsis thaliana.

Authors:  F M de Assis Filho; J L Sherwood
Journal:  Phytopathology       Date:  2000-11       Impact factor: 4.025

7.  Turnip yellow mosaic virus as a chemoaddressable bionanoparticle.

Authors:  Hannah N Barnhill; Rachel Reuther; P Lee Ferguson; Theo Dreher; Qian Wang
Journal:  Bioconjug Chem       Date:  2007-04-12       Impact factor: 4.774

8.  Physicochemical studies on turnip-yellow-mosaic virus. Homogeneity, relative molecular masses, hydrodynamic radii and concentration-dependence of parameters in non-dissociating solvents.

Authors:  S E Harding; P Johnson
Journal:  Biochem J       Date:  1985-11-01       Impact factor: 3.857

9.  Development and Practical Use of RT-PCR for Seed-transmitted Prune dwarf virus in Quarantine.

Authors:  Siwon Lee; Yong-Gil Shin
Journal:  Plant Pathol J       Date:  2014-06       Impact factor: 1.795

10.  Feasibility Study for Detection of Turnip yellow mosaic virus (TYMV) Infection of Chinese Cabbage Plants Using Raman Spectroscopy.

Authors:  Saetbyeol Kim; Sanguk Lee; Hee-Youn Chi; Mi-Kyeong Kim; Jeong-Soo Kim; Su-Heon Lee; Hoeil Chung
Journal:  Plant Pathol J       Date:  2013-03       Impact factor: 1.795

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