Literature DB >> 26840503

DNA Origami: Folded DNA-Nanodevices That Can Direct and Interpret Cell Behavior.

Cathal J Kearney1, Christopher R Lucas2, Fergal J O'Brien1, Carlos E Castro2.   

Abstract

DNA origami is a DNA-based nanotechnology that utilizes programmed combinations of short complementary oligonucleotides to fold a large single strand of DNA into precise 2D and 3D shapes. The exquisite nanoscale shape control of this inherently biocompatible material is combined with the potential to spatially address the origami structures with diverse cargoes including drugs, antibodies, nucleic acid sequences, small molecules, and inorganic particles. This programmable flexibility enables the fabrication of precise nanoscale devices that have already shown great potential for biomedical applications such as: drug delivery, biosensing, and synthetic nanopore formation. Here, the advances in the DNA-origami field since its inception several years ago are reviewed with a focus on how these DNA-nanodevices can be designed to interact with cells to direct or probe their behavior.
© 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  DNA origami; biosensing; drug delivery; nanoparticles; nanopores

Mesh:

Substances:

Year:  2016        PMID: 26840503      PMCID: PMC4945425          DOI: 10.1002/adma.201504733

Source DB:  PubMed          Journal:  Adv Mater        ISSN: 0935-9648            Impact factor:   30.849


  86 in total

1.  Molecular structure of nucleic acids; a structure for deoxyribose nucleic acid.

Authors:  J D WATSON; F H CRICK
Journal:  Nature       Date:  1953-04-25       Impact factor: 49.962

2.  Gold nanoparticle self-similar chain structure organized by DNA origami.

Authors:  Baoquan Ding; Zhengtao Deng; Hao Yan; Stefano Cabrini; Ronald N Zuckermann; Jeffrey Bokor
Journal:  J Am Chem Soc       Date:  2010-03-17       Impact factor: 15.419

3.  Programmed two-dimensional self-assembly of multiple DNA origami jigsaw pieces.

Authors:  Arivazhagan Rajendran; Masayuki Endo; Yousuke Katsuda; Kumi Hidaka; Hiroshi Sugiyama
Journal:  ACS Nano       Date:  2010-12-28       Impact factor: 15.881

4.  Six-helix bundles designed from DNA.

Authors:  Frederick Mathieu; Shiping Liao; Jens Kopatsch; Tong Wang; Chengde Mao; Nadrian C Seeman
Journal:  Nano Lett       Date:  2005-04       Impact factor: 11.189

5.  Folding DNA to create nanoscale shapes and patterns.

Authors:  Paul W K Rothemund
Journal:  Nature       Date:  2006-03-16       Impact factor: 49.962

6.  Programmable motion of DNA origami mechanisms.

Authors:  Alexander E Marras; Lifeng Zhou; Hai-Jun Su; Carlos E Castro
Journal:  Proc Natl Acad Sci U S A       Date:  2015-01-05       Impact factor: 11.205

7.  Structural DNA nanotechnology for intelligent drug delivery.

Authors:  Jie Chao; Huajie Liu; Shao Su; Lianhui Wang; Wei Huang; Chunhai Fan
Journal:  Small       Date:  2014-06-23       Impact factor: 13.281

8.  Visualization of the intracellular location and stability of DNA origami with a label-free fluorescent probe.

Authors:  Xibo Shen; Qiao Jiang; Jinye Wang; Luru Dai; Guozhang Zou; Zhen-Gang Wang; Wei-Qiang Chen; Wei Jiang; Baoquan Ding
Journal:  Chem Commun (Camb)       Date:  2012-11-28       Impact factor: 6.222

9.  A DNA nanostructure platform for directed assembly of synthetic vaccines.

Authors:  Xiaowei Liu; Yang Xu; Tao Yu; Craig Clifford; Yan Liu; Hao Yan; Yung Chang
Journal:  Nano Lett       Date:  2012-07-06       Impact factor: 11.189

10.  DNA brick crystals with prescribed depths.

Authors:  Yonggang Ke; Luvena L Ong; Wei Sun; Jie Song; Mingdong Dong; William M Shih; Peng Yin
Journal:  Nat Chem       Date:  2014-10-19       Impact factor: 24.427

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  11 in total

1.  Smart cancer therapy with DNA origami.

Authors:  Ennio Tasciotti
Journal:  Nat Biotechnol       Date:  2018-03-06       Impact factor: 54.908

2.  DNA nanotechnology for nucleic acid analysis: multifunctional molecular DNA machine for RNA detection.

Authors:  A J Cox; H N Bengtson; K H Rohde; D M Kolpashchikov
Journal:  Chem Commun (Camb)       Date:  2016-12-06       Impact factor: 6.222

3.  DNA Origami Nanostructures Elicit Dose-Dependent Immunogenicity and Are Nontoxic up to High Doses In Vivo.

Authors:  Christopher R Lucas; Patrick D Halley; Amjad A Chowdury; Bonnie K Harrington; Larry Beaver; Rosa Lapalombella; Amy J Johnson; Erin K Hertlein; Mitch A Phelps; John C Byrd; Carlos E Castro
Journal:  Small       Date:  2022-05-28       Impact factor: 15.153

4.  High-Force Application by a Nanoscale DNA Force Spectrometer.

Authors:  Michael Darcy; Kyle Crocker; Yuchen Wang; Jenny V Le; Golbarg Mohammadiroozbahani; Mahmoud A S Abdelhamid; Timothy D Craggs; Carlos E Castro; Ralf Bundschuh; Michael G Poirier
Journal:  ACS Nano       Date:  2022-04-06       Impact factor: 18.027

5.  Accessing and Assessing the Cell-Surface Glycocalyx Using DNA Origami.

Authors:  Piyumi Wijesekara; Ying Liu; Weitao Wang; Elizabeth K Johnston; Mara L G Sullivan; Rebecca E Taylor; Xi Ren
Journal:  Nano Lett       Date:  2021-05-24       Impact factor: 11.189

6.  Real-time magnetic actuation of DNA nanodevices via modular integration with stiff micro-levers.

Authors:  Stephanie Lauback; Kara R Mattioli; Alexander E Marras; Maxim Armstrong; Thomas P Rudibaugh; Ratnasingham Sooryakumar; Carlos E Castro
Journal:  Nat Commun       Date:  2018-04-13       Impact factor: 14.919

7.  Compiler-aided systematic construction of large-scale DNA strand displacement circuits using unpurified components.

Authors:  Anupama J Thubagere; Chris Thachuk; Joseph Berleant; Robert F Johnson; Diana A Ardelean; Kevin M Cherry; Lulu Qian
Journal:  Nat Commun       Date:  2017-02-23       Impact factor: 14.919

8.  Protein-Functionalized DNA Nanostructures as Tools to Control Transcription in Zebrafish Embryos.

Authors:  Alessandro Angelin; Olivier Kassel; Sepand Rastegar; Uwe Strähle; Christof M Niemeyer
Journal:  ChemistryOpen       Date:  2016-12-28       Impact factor: 2.911

Review 9.  Engineered Tools to Study Intercellular Communication.

Authors:  Benjamin A Yang; Trisha M Westerhof; Kaitlyn Sabin; Sofia D Merajver; Carlos A Aguilar
Journal:  Adv Sci (Weinh)       Date:  2020-12-21       Impact factor: 16.806

Review 10.  Critical review of nucleic acid nanotechnology to identify gaps and inform a strategy for accelerated clinical translation.

Authors:  Kirill A Afonin; Marina A Dobrovolskaia; Weina Ke; Piotr Grodzinski; Mark Bathe
Journal:  Adv Drug Deliv Rev       Date:  2021-12-13       Impact factor: 17.873

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