Literature DB >> 26840013

Photoinduced Electron Transfer Elicits a Change in the Static Dielectric Constant of a de Novo Designed Protein.

Nicholas F Polizzi, Matthew J Eibling1, Jose Manuel Perez-Aguilar1, Jeff Rawson, Christopher J Lanci1, H Christopher Fry1, David N Beratan, Jeffery G Saven1, Michael J Therien.   

Abstract

We provide a direct measure of the change in effective dielectric constant (ε(S)) within a protein matrix after a photoinduced electron transfer (ET) reaction. A linked donor-bridge-acceptor molecule, PZn-Ph-NDI, consisting of a (porphinato)Zn donor (PZn), a phenyl bridge (Ph), and a naphthalene diimide acceptor (NDI), is shown to be a "meter" to indicate protein dielectric environment. We calibrated PZn-Ph-NDI ET dynamics as a function of solvent dielectric, and computationally de novo designed a protein SCPZnI3 to bind PZn-Ph-NDI in its interior. Mapping the protein ET dynamics onto the calibrated ET catalogue shows that SCPZnI3 undergoes a switch in the effective dielectric constant following photoinduced ET, from ε(S) ≈ 8 to ε(S) ≈ 3.

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Year:  2016        PMID: 26840013      PMCID: PMC5049705          DOI: 10.1021/jacs.5b13180

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  20 in total

Review 1.  What are the dielectric "constants" of proteins and how to validate electrostatic models?

Authors:  C N Schutz; A Warshel
Journal:  Proteins       Date:  2001-09-01

2.  Long-range electron transfer.

Authors:  Harry B Gray; Jay R Winkler
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-28       Impact factor: 11.205

3.  Determination of the primary charge separation rate in isolated photosystem II reaction centers with 500-fs time resolution.

Authors:  M R Wasielewski; D G Johnson; M Seibert
Journal:  Proc Natl Acad Sci U S A       Date:  1989-01       Impact factor: 11.205

4.  De novo design of a single-chain diphenylporphyrin metalloprotein.

Authors:  Gretchen M Bender; Andreas Lehmann; Hongling Zou; Hong Cheng; H Christopher Fry; Don Engel; Michael J Therien; J Kent Blasie; Heinrich Roder; Jeffrey G Saven; William F DeGrado
Journal:  J Am Chem Soc       Date:  2007-08-10       Impact factor: 15.419

5.  Trapping the P+B(L)- initial intermediate state of charge separation in photosynthetic reaction centers from Rhodobacter capsulatus.

Authors:  Brett Carter; Steven G Boxer; Dewey Holten; Christine Kirmaier
Journal:  Biochemistry       Date:  2009-03-31       Impact factor: 3.162

Review 6.  Biochemistry and theory of proton-coupled electron transfer.

Authors:  Agostino Migliore; Nicholas F Polizzi; Michael J Therien; David N Beratan
Journal:  Chem Rev       Date:  2014-04-01       Impact factor: 60.622

7.  Computational design and elaboration of a de novo heterotetrameric alpha-helical protein that selectively binds an emissive abiological (porphinato)zinc chromophore.

Authors:  H Christopher Fry; Andreas Lehmann; Jeffery G Saven; William F DeGrado; Michael J Therien
Journal:  J Am Chem Soc       Date:  2010-03-24       Impact factor: 15.419

8.  Charges in the hydrophobic interior of proteins.

Authors:  Daniel G Isom; Carlos A Castañeda; Brian R Cannon; Priya D Velu; Bertrand García-Moreno E
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-26       Impact factor: 11.205

9.  Computational de novo design and characterization of a protein that selectively binds a highly hyperpolarizable abiological chromophore.

Authors:  H Christopher Fry; Andreas Lehmann; Louise E Sinks; Inge Asselberghs; Andrey Tronin; Venkata Krishnan; J Kent Blasie; Koen Clays; William F DeGrado; Jeffery G Saven; Michael J Therien
Journal:  J Am Chem Soc       Date:  2013-09-05       Impact factor: 15.419

10.  On the Dielectric "Constant" of Proteins: Smooth Dielectric Function for Macromolecular Modeling and Its Implementation in DelPhi.

Authors:  Lin Li; Chuan Li; Zhe Zhang; Emil Alexov
Journal:  J Chem Theory Comput       Date:  2013-03-13       Impact factor: 6.006

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  3 in total

1.  Mean First-Passage Times in Biology.

Authors:  Nicholas F Polizzi; Michael J Therien; David N Beratan
Journal:  Isr J Chem       Date:  2016-08-05       Impact factor: 3.333

2.  De Novo Design, Solution Characterization, and Crystallographic Structure of an Abiological Mn-Porphyrin-Binding Protein Capable of Stabilizing a Mn(V) Species.

Authors:  Samuel I Mann; Animesh Nayak; George T Gassner; Michael J Therien; William F DeGrado
Journal:  J Am Chem Soc       Date:  2020-12-29       Impact factor: 15.419

3.  De novo metalloprotein design.

Authors:  Matthew J Chalkley; Samuel I Mann; William F DeGrado
Journal:  Nat Rev Chem       Date:  2021-12-06       Impact factor: 34.571

  3 in total

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