Literature DB >> 26836025

A collection of non-human primate computed tomography scans housed in MorphoSource, a repository for 3D data.

Lynn E Copes1, Lynn M Lucas1, James O Thostenson2, Hopi E Hoekstra3, Doug M Boyer4.   

Abstract

A dataset of high-resolution microCT scans of primate skulls (crania and mandibles) and certain postcranial elements was collected to address questions about primate skull morphology. The sample consists of 489 scans taken from 431 specimens, representing 59 species of most Primate families. These data have transformative reuse potential as such datasets are necessary for conducting high power research into primate evolution, but require significant time and funding to collect. Similar datasets were previously only available to select research groups across the world. The physical specimens are vouchered at Harvard's Museum of Comparative Zoology. The data collection took place at the Center for Nanoscale Systems at Harvard. The dataset is archived on MorphoSource.org. Though this is the largest high fidelity comparative dataset yet available, its provisioning on a web archive that allows unlimited researcher contributions promises a future with vastly increased digital collections available at researchers' finger tips.

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Year:  2016        PMID: 26836025      PMCID: PMC4736502          DOI: 10.1038/sdata.2016.1

Source DB:  PubMed          Journal:  Sci Data        ISSN: 2052-4463            Impact factor:   6.444


  4 in total

1.  The primate semicircular canal system and locomotion.

Authors:  Fred Spoor; Theodore Garland; Gail Krovitz; Timothy M Ryan; Mary T Silcox; Alan Walker
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-18       Impact factor: 11.205

2.  Fiji: an open-source platform for biological-image analysis.

Authors:  Johannes Schindelin; Ignacio Arganda-Carreras; Erwin Frise; Verena Kaynig; Mark Longair; Tobias Pietzsch; Stephan Preibisch; Curtis Rueden; Stephan Saalfeld; Benjamin Schmid; Jean-Yves Tinevez; Daniel James White; Volker Hartenstein; Kevin Eliceiri; Pavel Tomancak; Albert Cardona
Journal:  Nat Methods       Date:  2012-06-28       Impact factor: 28.547

3.  NIH Image to ImageJ: 25 years of image analysis.

Authors:  Caroline A Schneider; Wayne S Rasband; Kevin W Eliceiri
Journal:  Nat Methods       Date:  2012-07       Impact factor: 28.547

4.  Cranial vault thickness in primates: Homo erectus does not have uniquely thick vault bones.

Authors:  Lynn E Copes; William H Kimbel
Journal:  J Hum Evol       Date:  2015-12-01       Impact factor: 3.895

  4 in total
  12 in total

1.  Reassessment of the phylogenetic relationships of the late Miocene apes Hispanopithecus and Rudapithecus based on vestibular morphology.

Authors:  Alessandro Urciuoli; Clément Zanolli; Sergio Almécija; Amélie Beaudet; Jean Dumoncel; Naoki Morimoto; Masato Nakatsukasa; Salvador Moyà-Solà; David R Begun; David M Alba
Journal:  Proc Natl Acad Sci U S A       Date:  2021-02-02       Impact factor: 11.205

2.  A digital collection of rare and endangered lemurs and other primates from the Duke Lemur Center.

Authors:  Gabriel S Yapuncich; Addison D Kemp; Darbi M Griffith; Justin T Gladman; Erin Ehmke; Doug M Boyer
Journal:  PLoS One       Date:  2019-11-26       Impact factor: 3.240

3.  The fight for control over virtual fossils.

Authors:  Dyani Lewis
Journal:  Nature       Date:  2019-03       Impact factor: 49.962

4.  The evolution of the platyrrhine talus: A comparative analysis of the phenetic affinities of the Miocene platyrrhines with their modern relatives.

Authors:  Thomas A Püschel; Justin T Gladman; René Bobe; William I Sellers
Journal:  J Hum Evol       Date:  2017-08-29       Impact factor: 3.895

Review 5.  Laboratory x-ray micro-computed tomography: a user guideline for biological samples.

Authors:  Anton du Plessis; Chris Broeckhoven; Anina Guelpa; Stephan Gerhard le Roux
Journal:  Gigascience       Date:  2017-06-01       Impact factor: 6.524

6.  Micro-computed tomography reconstructions of tibiae of stem cell transplanted osteogenesis imperfecta mice.

Authors:  Anna M Ranzoni; Michelangelo Corcelli; Timothy R Arnett; Pascale V Guillot
Journal:  Sci Data       Date:  2018-05-29       Impact factor: 6.444

7.  Measuring inferential importance of taxa using taxon influence indices.

Authors:  John S S Denton; Eric W Goolsby
Journal:  Ecol Evol       Date:  2018-04-03       Impact factor: 2.912

8.  VIRMISCO - The Virtual Microscope Slide Collection.

Authors:  Peter Decker; Axel Christian; Willi E R Xylander
Journal:  Zookeys       Date:  2018-03-07       Impact factor: 1.546

9.  The evolution of the vestibular apparatus in apes and humans.

Authors:  Alessandro Urciuoli; Clément Zanolli; Amélie Beaudet; Jean Dumoncel; Frédéric Santos; Salvador Moyà-Solà; David M Alba
Journal:  Elife       Date:  2020-03-03       Impact factor: 8.140

10.  Sharing is caring? Measurement error and the issues arising from combining 3D morphometric datasets.

Authors:  Carmelo Fruciano; Mélina A Celik; Kaylene Butler; Tom Dooley; Vera Weisbecker; Matthew J Phillips
Journal:  Ecol Evol       Date:  2017-07-31       Impact factor: 2.912

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