Literature DB >> 26835508

Insight into Best Variables for COPD Case Identification: A Random Forests Analysis.

Nancy K Leidy1, Karen G Malley1, Anna W Steenrod1, David M Mannino2, Barry J Make3, Russ P Bowler3, Byron M Thomashow4, R G Barr4, Stephen I Rennard5, Julia F Houfek5, Barbara P Yawn6, Meilan K Han7, Catherine A Meldrum7, Elizabeth D Bacci1, John W Walsh8, Fernando Martinez9.   

Abstract

RATIONALE: This study is part of a larger, multi-method project to develop a questionnaire for identifying undiagnosed cases of chronic obstructive pulmonary disease (COPD) in primary care settings, with specific interest in the detection of patients with moderate to severe airway obstruction or risk of exacerbation.
OBJECTIVES: To examine 3 existing datasets for insight into key features of COPD that could be useful in the identification of undiagnosed COPD.
METHODS: Random forests analyses were applied to the following databases: COPD Foundation Peak Flow Study Cohort (N=5761), Burden of Obstructive Lung Disease (BOLD) Kentucky site (N=508), and COPDGene® (N=10,214). Four scenarios were examined to find the best, smallest sets of variables that distinguished cases and controls:(1) moderate to severe COPD (forced expiratory volume in 1 second [FEV1] <50% predicted) versus no COPD; (2) undiagnosed versus diagnosed COPD; (3) COPD with and without exacerbation history; and (4) clinically significant COPD (FEV1<60% predicted or history of acute exacerbation) versus all others.
RESULTS: From 4 to 8 variables were able to differentiate cases from controls, with sensitivity ≥73 (range: 73-90) and specificity >68 (range: 68-93). Across scenarios, the best models included age, smoking status or history, symptoms (cough, wheeze, phlegm), general or breathing-related activity limitation, episodes of acute bronchitis, and/or missed work days and non-work activities due to breathing or health.
CONCLUSIONS: Results provide insight into variables that should be considered during the development of candidate items for a new questionnaire to identify undiagnosed cases of clinically significant COPD.

Entities:  

Keywords:  COPD; case identification; chronic airways obstruction; data mining; primary care; random forests; screening

Year:  2016        PMID: 26835508      PMCID: PMC4729451          DOI: 10.15326/jcopdf.3.1.2015.0144

Source DB:  PubMed          Journal:  Chronic Obstr Pulm Dis        ISSN: 2372-952X


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Journal:  COPD       Date:  2012-03-12       Impact factor: 2.409

2.  Scoring system and clinical application of COPD diagnostic questionnaires.

Authors:  David B Price; David G Tinkelman; Robert J Nordyke; Sharon Isonaka; R J Halbert
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3.  Symptom-based questionnaire for identifying COPD in smokers.

Authors:  David B Price; David G Tinkelman; R J Halbert; Robert J Nordyke; Sharon Isonaka; Dmitry Nonikov; Elizabeth F Juniper; Daryl Freeman; Thomas Hausen; Mark L Levy; Anders Ostrem; Thys van der Molen; Constant P van Schayck
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4.  Questionnaires and pocket spirometers provide an alternative approach for COPD screening in the general population.

Authors:  Steven B Nelson; Lisa M LaVange; Yonghong Nie; John W Walsh; Paul L Enright; Fernando J Martinez; David M Mannino; Byron M Thomashow
Journal:  Chest       Date:  2012-08       Impact factor: 9.410

5.  Primary care spirometry: test quality and the feasibility and usefulness of specialist reporting.

Authors:  Patrick White; Wun Wong; Tracey Fleming; Barry Gray
Journal:  Br J Gen Pract       Date:  2007-09       Impact factor: 5.386

6.  External validation of a COPD diagnostic questionnaire.

Authors:  D Kotz; P Nelemans; C P van Schayck; G J Wesseling
Journal:  Eur Respir J       Date:  2007-10-24       Impact factor: 16.671

7.  Trends in the prevalence of obstructive and restrictive lung function among adults in the United States: findings from the National Health and Nutrition Examination surveys from 1988-1994 to 2007-2010.

Authors:  Earl S Ford; David M Mannino; Anne G Wheaton; Wayne H Giles; Letitia Presley-Cantrell; Janet B Croft
Journal:  Chest       Date:  2013-05       Impact factor: 9.410

8.  Case-finding options for COPD: results from the Burden of Obstructive Lung Disease study.

Authors:  Anamika Jithoo; Paul L Enright; Peter Burney; A Sonia Buist; Eric D Bateman; Wan C Tan; Michael Studnicka; Filip Mejza; Suzanne Gillespie; William M Vollmer
Journal:  Eur Respir J       Date:  2012-06-27       Impact factor: 16.671

9.  Spirometry utilization for COPD: how do we measure up?

Authors:  Meilan K Han; Min Gayles Kim; Russell Mardon; Phil Renner; Sean Sullivan; Gregory B Diette; Fernando J Martinez
Journal:  Chest       Date:  2007-06-05       Impact factor: 9.410

10.  Development and initial validation of a self-scored COPD Population Screener Questionnaire (COPD-PS).

Authors:  Fernando J Martinez; Anastasia E Raczek; Frederic D Seifer; Craig S Conoscenti; Tammy G Curtice; Thomas D'Eletto; Claudia Cote; Clare Hawkins; Amy L Phillips
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1.  Machine Learning and Prediction of All-Cause Mortality in COPD.

Authors:  Matthew Moll; Dandi Qiao; Elizabeth A Regan; Gary M Hunninghake; Barry J Make; Ruth Tal-Singer; Michael J McGeachie; Peter J Castaldi; Raul San Jose Estepar; George R Washko; James M Wells; David LaFon; Matthew Strand; Russell P Bowler; MeiLan K Han; Jorgen Vestbo; Bartolome Celli; Peter Calverley; James Crapo; Edwin K Silverman; Brian D Hobbs; Michael H Cho
Journal:  Chest       Date:  2020-04-27       Impact factor: 9.410

2.  A New Approach for Identifying Patients with Undiagnosed Chronic Obstructive Pulmonary Disease.

Authors:  Fernando J Martinez; David Mannino; Nancy Kline Leidy; Karen G Malley; Elizabeth D Bacci; R Graham Barr; Russ P Bowler; MeiLan K Han; Julia F Houfek; Barry Make; Catherine A Meldrum; Stephen Rennard; Byron Thomashow; John Walsh; Barbara P Yawn
Journal:  Am J Respir Crit Care Med       Date:  2017-03-15       Impact factor: 21.405

3.  How Well Does CAPTURE Translate?: An Exploratory Analysis of a COPD Case-Finding Method for Spanish-Speaking Patients.

Authors:  Wilson A Quezada; Beth A Whippo; Patricia A Jellen; Nancy K Leidy; David M Mannino; Katherine J Kim; MeiLan K Han; Julia F Houfek; Barry Make; Karen G Malley; Catherine A Meldrum; Stephen I Rennard; Barbara P Yawn; Fernando J Martinez; Byron M Thomashow
Journal:  Chest       Date:  2017-04-14       Impact factor: 9.410

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