Literature DB >> 26829932

Emerging Trends in Epigenetic Regulation of Nutrient Deficiency Response in Plants.

Gunjan Sirohi1, Bipin K Pandey1, Priyanka Deveshwar2, Jitender Giri3.   

Abstract

Diverse environmental stimuli largely affect the ionic balance of soil, which have a direct effect on growth and crop yield. Details are fast emerging on the genetic/molecular regulators, at whole-genome levels, of plant responses to mineral deficiencies in model and crop plants. These genetic regulators determine the root architecture and physiological adaptations for better uptake and utilization of minerals from soil. Recent evidence also shows the potential roles of epigenetic mechanisms in gene regulation, driven by minerals imbalance. Mineral deficiency or sufficiency leads to developmental plasticity in plants for adaptation, which is preceded by a change in the pattern of gene expression. Notably, such changes at molecular levels are also influenced by altered chromatin structure and methylation patterns, or involvement of other epigenetic components. Interestingly, many of the changes induced by mineral deficiency are also inheritable in the form of epigenetic memory. Unravelling these mechanisms in response to mineral deficiency would further advance our understanding of this complex plant response. Further studies on such approaches may serve as an exciting interaction model of epigenetic and genetic regulations of mineral homeostasis in plants and designing strategies for crop improvement.

Entities:  

Keywords:  Abiotic stress; Epigenetic; MicroRNAs; Mineral homeostasis; Plant adaptation

Mesh:

Year:  2016        PMID: 26829932     DOI: 10.1007/s12033-016-9919-0

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  146 in total

Review 1.  Histone acetylation: a switch between repressive and permissive chromatin. Second in review series on chromatin dynamics.

Authors:  Anton Eberharter; Peter B Becker
Journal:  EMBO Rep       Date:  2002-03       Impact factor: 8.807

2.  GAMYB controls different sets of genes and is differentially regulated by microRNA in aleurone cells and anthers.

Authors:  Hiroyuki Tsuji; Koichiro Aya; Miyako Ueguchi-Tanaka; Yukihisa Shimada; Mikio Nakazono; Ryosuke Watanabe; Naoko K Nishizawa; Kenji Gomi; Asako Shimada; Hidemi Kitano; Motoyuki Ashikari; Makoto Matsuoka
Journal:  Plant J       Date:  2006-06-22       Impact factor: 6.417

Review 3.  Epigenetic memory in plants.

Authors:  Mayumi Iwasaki; Jerzy Paszkowski
Journal:  EMBO J       Date:  2014-08-07       Impact factor: 11.598

4.  A common position-dependent mechanism controls cell-type patterning and GLABRA2 regulation in the root and hypocotyl epidermis of Arabidopsis.

Authors:  C Y Hung; Y Lin; M Zhang; S Pollock; M D Marks; J Schiefelbein
Journal:  Plant Physiol       Date:  1998-05       Impact factor: 8.340

5.  Non-coding small RNAs responsive to abiotic stress in wheat (Triticum aestivum L.).

Authors:  Yingyin Yao; Zhongfu Ni; Huiru Peng; Fenglong Sun; Mingming Xin; Ramanjulu Sunkar; Jian-Kang Zhu; Qixin Sun
Journal:  Funct Integr Genomics       Date:  2010-03-09       Impact factor: 3.410

6.  Identification of Arabidopsis histone deacetylase HDA6 mutants that affect transgene expression.

Authors:  J Murfett; X J Wang; G Hagen; T J Guilfoyle
Journal:  Plant Cell       Date:  2001-05       Impact factor: 11.277

7.  Expression of KT/KUP genes in Arabidopsis and the role of root hairs in K+ uptake.

Authors:  Sung Ju Ahn; Ryoung Shin; Daniel P Schachtman
Journal:  Plant Physiol       Date:  2004-02-26       Impact factor: 8.340

Review 8.  NPK macronutrients and microRNA homeostasis.

Authors:  Franceli R Kulcheski; Régis Côrrea; Igor A Gomes; Júlio C de Lima; Rogerio Margis
Journal:  Front Plant Sci       Date:  2015-06-16       Impact factor: 5.753

9.  Metal A and metal B sites of nuclear RNA polymerases Pol IV and Pol V are required for siRNA-dependent DNA methylation and gene silencing.

Authors:  Jeremy R Haag; Olga Pontes; Craig S Pikaard
Journal:  PLoS One       Date:  2009-01-01       Impact factor: 3.240

10.  Iron deficiency in barley plants: phytosiderophore release, iron translocation, and DNA methylation.

Authors:  Marika Bocchini; Maria Luce Bartucca; Simona Ciancaleoni; Tanja Mimmo; Stefano Cesco; Youry Pii; Emidio Albertini; Daniele Del Buono
Journal:  Front Plant Sci       Date:  2015-07-09       Impact factor: 5.753

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  4 in total

1.  SDG8-Mediated Histone Methylation and RNA Processing Function in the Response to Nitrate Signaling.

Authors:  Ying Li; Matthew Brooks; Jenny Yeoh-Wang; Rachel M McCoy; Tara M Rock; Angelo Pasquino; Chang In Moon; Ryan M Patrick; Milos Tanurdzic; Sandrine Ruffel; Joshua R Widhalm; W Richard McCombie; Gloria M Coruzzi
Journal:  Plant Physiol       Date:  2019-10-22       Impact factor: 8.340

2.  Omics Data Reveal Putative Regulators of Einkorn Grain Protein Composition under Sulfur Deficiency.

Authors:  Titouan Bonnot; Pierre Martre; Victor Hatte; Mireille Dardevet; Philippe Leroy; Camille Bénard; Natalia Falagán; Marie-Laure Martin-Magniette; Catherine Deborde; Annick Moing; Yves Gibon; Marie Pailloux; Emmanuelle Bancel; Catherine Ravel
Journal:  Plant Physiol       Date:  2020-04-15       Impact factor: 8.340

Review 3.  Involvement of Small RNAs in Phosphorus and Sulfur Sensing, Signaling and Stress: Current Update.

Authors:  Smita Kumar; Saurabh Verma; Prabodh K Trivedi
Journal:  Front Plant Sci       Date:  2017-03-10       Impact factor: 5.753

Review 4.  Functions of dopamine in plants: a review.

Authors:  Qianwei Liu; Tengteng Gao; Wenxuan Liu; Yusong Liu; Yongjuan Zhao; Yuerong Liu; Wenjing Li; Ke Ding; Fengwang Ma; Chao Li
Journal:  Plant Signal Behav       Date:  2020-10-11
  4 in total

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