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Literature DB >> 25104823

Epigenetic memory in plants.

Abstract

Epigenetics refers to heritable changes in patterns of gene expression that occur without alterations in DNA sequence. The epigenetic mechanisms involve covalent modifications of DNA and histones, which affect transcriptional activity of chromatin. Since chromatin states can be propagated through mitotic and meiotic divisions, epigenetic mechanisms are thought to provide heritable 'cellular memory'. Here, we review selected examples of epigenetic memory in plants and briefly discuss underlying mechanisms.

Keywords: epialleles; epigenetics; memory; plants; transposons

Mesh：

Substances：
DNA, Plant
Histones

Year: 2014 PMID： 25104823 PMCID： PMC4195768 DOI： 10.15252/embj.201488883

Source DB: PubMed Journal: EMBO J ISSN： 0261-4189 Impact factor: 11.598

119 in total

1. Molecular analysis of FRIGIDA, a major determinant of natural variation in Arabidopsis flowering time.

Authors: U Johanson; J West; C Lister; S Michaels; R Amasino; C Dean
Journal: Science Date: 2000-10-13 Impact factor: 47.728

2. Multiple roles of Arabidopsis VRN1 in vernalization and flowering time control.

Authors: Yaron Y Levy; Stéphane Mesnage; Joshua S Mylne; Anthony R Gendall; Caroline Dean
Journal: Science Date: 2002-07-12 Impact factor: 47.728

3. Rapid establishment of genetic incompatibility through natural epigenetic variation.

Authors: Stéphanie Durand; Nicolas Bouché; Elsa Perez Strand; Olivier Loudet; Christine Camilleri
Journal: Curr Biol Date: 2012-01-26 Impact factor: 10.834

4. The significance of responses of the genome to challenge.

Authors: B McClintock
Journal: Science Date: 1984-11-16 Impact factor: 47.728

5. Dynamic and reversible changes in histone H3-Lys4 methylation and H3 acetylation occurring at submergence-inducible genes in rice.

Authors: Hiroyuki Tsuji; Hiroaki Saika; Nobuhiro Tsutsumi; Atsushi Hirai; Mikio Nakazono
Journal: Plant Cell Physiol Date: 2006-06-13 Impact factor: 4.927

Review 6. Genome instability and epigenetic modification--heritable responses to environmental stress?

Authors: Alex Boyko; Igor Kovalchuk
Journal: Curr Opin Plant Biol Date: 2011-03-26 Impact factor: 7.834

7. An siRNA pathway prevents transgenerational retrotransposition in plants subjected to stress.

Authors: Hidetaka Ito; Hervé Gaubert; Etienne Bucher; Marie Mirouze; Isabelle Vaillant; Jerzy Paszkowski
Journal: Nature Date: 2011-03-13 Impact factor: 49.962

8. The FLF MADS box gene: a repressor of flowering in Arabidopsis regulated by vernalization and methylation.

Authors: C C Sheldon; J E Burn; P P Perez; J Metzger; J A Edwards; W J Peacock; E S Dennis
Journal: Plant Cell Date: 1999-03 Impact factor: 11.277

9. Resetting and regulation of Flowering Locus C expression during Arabidopsis reproductive development.

Authors: Jean Choi; Youbong Hyun; Min-Jeong Kang; Hye In Yun; Jae-Young Yun; Clare Lister; Caroline Dean; Richard M Amasino; Bosl Noh; Yoo-Sun Noh; Yeonhee Choi
Journal: Plant J Date: 2009-01-17 Impact factor: 6.417

Review 10. Salicylic acid in plant defence--the players and protagonists.

Authors: Gary Loake; Murray Grant
Journal: Curr Opin Plant Biol Date: 2007-09-27 Impact factor: 7.834

46 in total

1. MSAP analysis of epigenetic changes reveals the mechanism of bicolor petal formation in Paeonia suffruticosa 'Shima Nishiki'.

Authors: Yu Wang; Mingyuan Zhao; Zongda Xu; Shuai Qi; Xiaoyan Yu; Xu Han
Journal: 3 Biotech Date: 2019-07-30 Impact factor: 2.406

2. Transcriptional profiling of epigenetic regulators in somatic embryos during temperature induced formation of an epigenetic memory in Norway spruce.

Authors: Igor A Yakovlev; Elena Carneros; YeonKyeong Lee; Jorunn E Olsen; Carl Gunnar Fossdal
Journal: Planta Date: 2016-02-19 Impact factor: 4.116

3. Assessment of natural DNA methylation variation and its association with economically important traits in dolichos bean (Lablab purpureus L. Var. Lignosus) using AMP-PCR assay.

Authors: H Ajaykumar; S Ramesh; N C Sunitha; C Anilkumar
Journal: J Appl Genet Date: 2021-07-10 Impact factor: 3.240

Review 4. Epigenetic inheritance, prions and evolution.

Authors: Johannes Manjrekar
Journal: J Genet Date: 2017-07 Impact factor: 1.166

5. Paternal arbuscular mycorrhizal fungal status affects DNA methylation in seeds.

Authors: Sandra Varga; Carl D Soulsbury
Journal: Biol Lett Date: 2017-09 Impact factor: 3.703

Review 6. Transgenerational stress-adaption: an opportunity for ecological epigenetics.

Authors: Arne Weinhold
Journal: Plant Cell Rep Date: 2017-10-14 Impact factor: 4.570

7. Molecular aspects of zygotic embryogenesis in sunflower (Helianthus annuus L.): correlation of positive histone marks with HaWUS expression and putative link HaWUS/HaL1L.

Authors: Mariangela Salvini; Marco Fambrini; Lucia Giorgetti; Claudio Pugliesi
Journal: Planta Date: 2015-09-16 Impact factor: 4.116

8. Variation in whole DNA methylation in red maple (Acer rubrum) populations from a mining region: association with metal contamination and cation exchange capacity (CEC) in podzolic soils.

Authors: K N Kalubi; M Mehes-Smith; G Spiers; A Omri
Journal: Ecotoxicology Date: 2017-02-15 Impact factor: 2.823

9. Emerging Trends in Epigenetic Regulation of Nutrient Deficiency Response in Plants.

Authors: Gunjan Sirohi; Bipin K Pandey; Priyanka Deveshwar; Jitender Giri
Journal: Mol Biotechnol Date: 2016-03 Impact factor: 2.695

10. Positive selective sweeps of epigenetic mutations regulating specialized metabolites in plants.

Authors: Kazumasa Shirai; Mitsuhiko P Sato; Ranko Nishi; Masahide Seki; Yutaka Suzuki; Kousuke Hanada
Journal: Genome Res Date: 2021-05-18 Impact factor: 9.043