Literature DB >> 26821702

Hybrid phase ligation for efficient synthesis of histone proteins.

Ruixuan R Yu1, Santosh K Mahto2, Kurt Justus1, Mallory M Alexander2, Cecil J Howard1, Jennifer J Ottesen1.   

Abstract

We introduce a hybrid solid-solution phase ligation approach that combines the efficiency of solid phase ligation with solution phase ligation in the total synthesis of modified histone proteins. A two linker strategy allows analysis throughout work on the solid phase and maximizes yields through cleavage at an external Rink, while an internal HMBA linker allows the native carboxyl terminus for any protein sequence. We demonstrate this approach for two histone proteins: triple-acetylated H4-K5ac, K12ac, K91ac and CENP-A-K124ac.

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Year:  2016        PMID: 26821702      PMCID: PMC4767651          DOI: 10.1039/c5ob02195b

Source DB:  PubMed          Journal:  Org Biomol Chem        ISSN: 1477-0520            Impact factor:   3.876


  40 in total

1.  Free-radical-based, specific desulfurization of cysteine: a powerful advance in the synthesis of polypeptides and glycopolypeptides.

Authors:  Qian Wan; Samuel J Danishefsky
Journal:  Angew Chem Int Ed Engl       Date:  2007       Impact factor: 15.336

2.  Native chemical ligation at valine.

Authors:  Christian Haase; Heike Rohde; Oliver Seitz
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

3.  Crystal structure of the human centromeric nucleosome containing CENP-A.

Authors:  Hiroaki Tachiwana; Wataru Kagawa; Tatsuya Shiga; Akihisa Osakabe; Yuta Miya; Kengo Saito; Yoko Hayashi-Takanaka; Takashi Oda; Mamoru Sato; Sam-Yong Park; Hiroshi Kimura; Hitoshi Kurumizaka
Journal:  Nature       Date:  2011-07-10       Impact factor: 49.962

4.  Crystal structure of the nucleosome core particle at 2.8 A resolution.

Authors:  K Luger; A W Mäder; R K Richmond; D F Sargent; T J Richmond
Journal:  Nature       Date:  1997-09-18       Impact factor: 49.962

Review 5.  Histones: at the crossroads of peptide and protein chemistry.

Authors:  Manuel M Müller; Tom W Muir
Journal:  Chem Rev       Date:  2014-10-20       Impact factor: 60.622

6.  Cell-cycle-dependent structural transitions in the human CENP-A nucleosome in vivo.

Authors:  Minh Bui; Emilios K Dimitriadis; Christian Hoischen; Eunkyung An; Delphine Quénet; Sindy Giebe; Aleksandra Nita-Lazar; Stephan Diekmann; Yamini Dalal
Journal:  Cell       Date:  2012-07-20       Impact factor: 41.582

Review 7.  Accessing DNA damage in chromatin: Preparing the chromatin landscape for base excision repair.

Authors:  Yesenia Rodriguez; John M Hinz; Michael J Smerdon
Journal:  DNA Repair (Amst)       Date:  2015-05-02

8.  Preparing semisynthetic and fully synthetic histones h3 and h4 to modify the nucleosome core.

Authors:  John C Shimko; Cecil J Howard; Michael G Poirier; Jennifer J Ottesen
Journal:  Methods Mol Biol       Date:  2013

Review 9.  The tale beyond the tail: histone core domain modifications and the regulation of chromatin structure.

Authors:  Erica L Mersfelder; Mark R Parthun
Journal:  Nucleic Acids Res       Date:  2006-05-19       Impact factor: 16.971

10.  Replication-independent nucleosome exchange is enhanced by local and specific acetylation of histone H4.

Authors:  Giles O Elliott; Kevin J Murphy; Jeffrey J Hayes; Christophe Thiriet
Journal:  Nucleic Acids Res       Date:  2013-01-08       Impact factor: 16.971

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  5 in total

1.  H1.0 C Terminal Domain Is Integral for Altering Transcription Factor Binding within Nucleosomes.

Authors:  Nathaniel L Burge; Jenna L Thuma; Ziyong Z Hong; Kevin B Jamison; Jennifer J Ottesen; Michael G Poirier
Journal:  Biochemistry       Date:  2022-04-04       Impact factor: 3.321

2.  Internal modifications in the CENP-A nucleosome modulate centromeric dynamics.

Authors:  Minh Bui; Mary Pitman; Arthur Nuccio; Serene Roque; Paul Gregory Donlin-Asp; Aleksandra Nita-Lazar; Garegin A Papoian; Yamini Dalal
Journal:  Epigenetics Chromatin       Date:  2017-04-04       Impact factor: 4.954

3.  On-Demand Detachment of Succinimides on Cysteine to Facilitate (Semi)Synthesis of Challenging Proteins.

Authors:  Ganga B Vamisetti; Gandhesiri Satish; Prasad Sulkshane; Guy Mann; Michael H Glickman; Ashraf Brik
Journal:  J Am Chem Soc       Date:  2020-11-02       Impact factor: 15.419

4.  DNAzymes for amine and peptide lysine acylation.

Authors:  Tianjiong Yao; Jack J Przybyla; Peter Yeh; Austin M Woodard; Hannah J Nilsson; Benjamin M Brandsen; Scott K Silverman
Journal:  Org Biomol Chem       Date:  2021-01-06       Impact factor: 3.876

Review 5.  Total Chemical Synthesis of Modified Histones.

Authors:  Yun-Kun Qi; Hua-Song Ai; Yi-Ming Li; Baihui Yan
Journal:  Front Chem       Date:  2018-02-06       Impact factor: 5.221

  5 in total

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