Literature DB >> 26819310

Chimeric Filoviruses for Identification and Characterization of Monoclonal Antibodies.

Philipp A Ilinykh1,2, Xiaoli Shen1,2, Andrew I Flyak3, Natalia Kuzmina1,2, Thomas G Ksiazek1,2, James E Crowe3,4,5, Alexander Bukreyev6,2.   

Abstract

UNLABELLED: Recent experiments suggest that some glycoprotein (GP)-specific monoclonal antibodies (MAbs) can protect experimental animals against the filovirus Ebola virus (EBOV). There is a need for isolation of MAbs capable of neutralizing multiple filoviruses. Antibody neutralization assays for filoviruses frequently use surrogate systems such as the rhabdovirus vesicular stomatitis Indiana virus (VSV), lentiviruses or gammaretroviruses with their envelope proteins replaced with EBOV GP or pseudotyped with EBOV GP. It is optimal for both screening and in-depth characterization of newly identified neutralizing MAbs to generate recombinant filoviruses that express a reporter fluorescent protein in order to more easily monitor and quantify the infection. Our study showed that unlike neutralization-sensitive chimeric VSV, authentic filoviruses are highly resistant to neutralization by MAbs. We used reverse genetics techniques to replace EBOV GP with its counterpart from the heterologous filoviruses Bundibugyo virus (BDBV), Sudan virus, and even Marburg virus and Lloviu virus, which belong to the heterologous genera in the filovirus family. This work resulted in generation of multiple chimeric filoviruses, demonstrating the ability of filoviruses to tolerate swapping of the envelope protein. The sensitivity of chimeric filoviruses to neutralizing MAbs was similar to that of authentic biologically derived filoviruses with the same GP. Moreover, disabling the expression of the secreted GP (sGP) resulted in an increased susceptibility of an engineered virus to the BDBV52 MAb isolated from a BDBV survivor, suggesting a role for sGP in evasion of antibody neutralization in the context of a human filovirus infection. IMPORTANCE: The study demonstrated that chimeric rhabdoviruses in which G protein is replaced with filovirus GP, widely used as surrogate targets for characterization of filovirus neutralizing antibodies, do not accurately predict the ability of antibodies to neutralize authentic filoviruses, which appeared to be resistant to neutralization. However, a recombinant EBOV expressing a fluorescent protein tolerated swapping of GP with counterparts from heterologous filoviruses, allowing high-throughput screening of B cell lines to isolate MAbs of any filovirus specificity. Human MAb BDBV52, which was isolated from a survivor of BDBV infection, was capable of partially neutralizing a chimeric EBOV carrying BDBV GP in which expression of sGP was disabled. In contrast, the parental virus expressing sGP was resistant to the MAb. Thus, the ability of filoviruses to tolerate swapping of GP can be used for identification of neutralizing MAbs specific to any filovirus and for the characterization of MAb specificity and mechanism of action.
Copyright © 2016, American Society for Microbiology. All Rights Reserved.

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Year:  2016        PMID: 26819310      PMCID: PMC4810552          DOI: 10.1128/JVI.00101-16

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  50 in total

1.  Proteolytic processing of Marburg virus glycoprotein.

Authors:  V E Volchkov; V A Volchkova; U Ströher; S Becker; O Dolnik; M Cieplik; W Garten; H D Klenk; H Feldmann
Journal:  Virology       Date:  2000-03-01       Impact factor: 3.616

2.  Mechanism of human antibody-mediated neutralization of Marburg virus.

Authors:  Andrew I Flyak; Philipp A Ilinykh; Charles D Murin; Tania Garron; Xiaoli Shen; Marnie L Fusco; Takao Hashiguchi; Zachary A Bornholdt; James C Slaughter; Gopal Sapparapu; Curtis Klages; Thomas G Ksiazek; Andrew B Ward; Erica Ollmann Saphire; Alexander Bukreyev; James E Crowe
Journal:  Cell       Date:  2015-02-26       Impact factor: 41.582

3.  Different Temporal Effects of Ebola Virus VP35 and VP24 Proteins on Global Gene Expression in Human Dendritic Cells.

Authors:  Philipp A Ilinykh; Ndongala M Lubaki; Steven G Widen; Lynnsey A Renn; Terence C Theisen; Ronald L Rabin; Thomas G Wood; Alexander Bukreyev
Journal:  J Virol       Date:  2015-05-13       Impact factor: 5.103

4.  RNA Editing of the GP Gene of Ebola Virus is an Important Pathogenicity Factor.

Authors:  Valentina A Volchkova; Olga Dolnik; Mikel J Martinez; Olivier Reynard; Viktor E Volchkov
Journal:  J Infect Dis       Date:  2015-07-02       Impact factor: 5.226

5.  Structure of the Ebola virus glycoprotein bound to an antibody from a human survivor.

Authors:  Jeffrey E Lee; Marnie L Fusco; Ann J Hessell; Wendelien B Oswald; Dennis R Burton; Erica Ollmann Saphire
Journal:  Nature       Date:  2008-07-10       Impact factor: 49.962

6.  The secreted form of respiratory syncytial virus G glycoprotein helps the virus evade antibody-mediated restriction of replication by acting as an antigen decoy and through effects on Fc receptor-bearing leukocytes.

Authors:  Alexander Bukreyev; Lijuan Yang; Jens Fricke; Lily Cheng; Jerrold M Ward; Brian R Murphy; Peter L Collins
Journal:  J Virol       Date:  2008-10-08       Impact factor: 5.103

7.  Cross-Reactive and Potent Neutralizing Antibody Responses in Human Survivors of Natural Ebolavirus Infection.

Authors:  Andrew I Flyak; Xiaoli Shen; Charles D Murin; Hannah L Turner; Joshua A David; Marnie L Fusco; Rebecca Lampley; Nurgun Kose; Philipp A Ilinykh; Natalia Kuzmina; Andre Branchizio; Hannah King; Leland Brown; Christopher Bryan; Edgar Davidson; Benjamin J Doranz; James C Slaughter; Gopal Sapparapu; Curtis Klages; Thomas G Ksiazek; Erica Ollmann Saphire; Andrew B Ward; Alexander Bukreyev; James E Crowe
Journal:  Cell       Date:  2016-01-21       Impact factor: 41.582

8.  Molecular characterization of the monoclonal antibodies composing ZMAb: a protective cocktail against Ebola virus.

Authors:  Jonathan Audet; Gary Wong; Han Wang; Guangwen Lu; George F Gao; Gary Kobinger; Xiangguo Qiu
Journal:  Sci Rep       Date:  2014-11-06       Impact factor: 4.379

9.  The deep archaeal roots of eukaryotes.

Authors:  Natalya Yutin; Kira S Makarova; Sergey L Mekhedov; Yuri I Wolf; Eugene V Koonin
Journal:  Mol Biol Evol       Date:  2008-05-06       Impact factor: 16.240

10.  Newly discovered ebola virus associated with hemorrhagic fever outbreak in Uganda.

Authors:  Jonathan S Towner; Tara K Sealy; Marina L Khristova; César G Albariño; Sean Conlan; Serena A Reeder; Phenix-Lan Quan; W Ian Lipkin; Robert Downing; Jordan W Tappero; Samuel Okware; Julius Lutwama; Barnabas Bakamutumaho; John Kayiwa; James A Comer; Pierre E Rollin; Thomas G Ksiazek; Stuart T Nichol
Journal:  PLoS Pathog       Date:  2008-11-21       Impact factor: 6.823

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  22 in total

1.  Non-neutralizing Antibodies from a Marburg Infection Survivor Mediate Protection by Fc-Effector Functions and by Enhancing Efficacy of Other Antibodies.

Authors:  Philipp A Ilinykh; Kai Huang; Rodrigo I Santos; Pavlo Gilchuk; Bronwyn M Gunn; Marcus M Karim; Jenny Liang; Mallorie E Fouch; Edgar Davidson; Diptiben V Parekh; James B Kimble; Colette A Pietzsch; Michelle Meyer; Natalia A Kuzmina; Larry Zeitlin; Erica Ollmann Saphire; Galit Alter; James E Crowe; Alexander Bukreyev
Journal:  Cell Host Microbe       Date:  2020-04-21       Impact factor: 21.023

2.  Ebolavirus Chimerization for the Development of a Mouse Model for Screening of Bundibugyo-Specific Antibodies.

Authors:  Philipp A Ilinykh; Jessica Graber; Natalia A Kuzmina; Kai Huang; Thomas G Ksiazek; James E Crowe; Alexander Bukreyev
Journal:  J Infect Dis       Date:  2018-11-22       Impact factor: 5.226

3.  Systematic Analysis of Monoclonal Antibodies against Ebola Virus GP Defines Features that Contribute to Protection.

Authors:  Erica Ollmann Saphire; Sharon L Schendel; Marnie L Fusco; Karthik Gangavarapu; Bronwyn M Gunn; Anna Z Wec; Peter J Halfmann; Jennifer M Brannan; Andrew S Herbert; Xiangguo Qiu; Kshitij Wagh; Shihua He; Elena E Giorgi; James Theiler; Kathleen B J Pommert; Tyler B Krause; Hannah L Turner; Charles D Murin; Jesper Pallesen; Edgar Davidson; Rafi Ahmed; M Javad Aman; Alexander Bukreyev; Dennis R Burton; James E Crowe; Carl W Davis; George Georgiou; Florian Krammer; Christos A Kyratsous; Jonathan R Lai; Cory Nykiforuk; Michael H Pauly; Pramila Rijal; Ayato Takada; Alain R Townsend; Viktor Volchkov; Laura M Walker; Cheng-I Wang; Larry Zeitlin; Benjamin J Doranz; Andrew B Ward; Bette Korber; Gary P Kobinger; Kristian G Andersen; Yoshihiro Kawaoka; Galit Alter; Kartik Chandran; John M Dye
Journal:  Cell       Date:  2018-08-09       Impact factor: 41.582

4.  Discovery of Marburg virus neutralizing antibodies from virus-naïve human antibody repertoires using large-scale structural predictions.

Authors:  Nina G Bozhanova; Amandeep K Sangha; Alexander M Sevy; Pavlo Gilchuk; Kai Huang; Rachel S Nargi; Joseph X Reidy; Andrew Trivette; Robert H Carnahan; Alexander Bukreyev; James E Crowe; Jens Meiler
Journal:  Proc Natl Acad Sci U S A       Date:  2020-11-23       Impact factor: 11.205

5.  Antibody-Dependent Enhancement of Ebola Virus Infection by Human Antibodies Isolated from Survivors.

Authors:  Natalia A Kuzmina; Patrick Younan; Pavlo Gilchuk; Rodrigo I Santos; Andrew I Flyak; Philipp A Ilinykh; Kai Huang; Ndongala M Lubaki; Palaniappan Ramanathan; James E Crowe; Alexander Bukreyev
Journal:  Cell Rep       Date:  2018-08-14       Impact factor: 9.423

6.  Pan-ebolavirus protective therapy by two multifunctional human antibodies.

Authors:  Pavlo Gilchuk; Charles D Murin; Robert W Cross; Philipp A Ilinykh; Kai Huang; Natalia Kuzmina; Viktoriya Borisevich; Krystle N Agans; Joan B Geisbert; Seth J Zost; Rachel S Nargi; Rachel E Sutton; Naveenchandra Suryadevara; Robin G Bombardi; Robert H Carnahan; Alexander Bukreyev; Thomas W Geisbert; Andrew B Ward; James E Crowe
Journal:  Cell       Date:  2021-10-28       Impact factor: 41.582

7.  An Ebola Virus-Like Particle-Based Reporter System Enables Evaluation of Antiviral Drugs In Vivo under Non-Biosafety Level 4 Conditions.

Authors:  Dapeng Li; Tan Chen; Yang Hu; Yu Zhou; Qingwei Liu; Dongming Zhou; Xia Jin; Zhong Huang
Journal:  J Virol       Date:  2016-09-12       Impact factor: 5.103

Review 8.  Neglected filoviruses.

Authors:  Robin Burk; Laura Bollinger; Joshua C Johnson; Jiro Wada; Sheli R Radoshitzky; Gustavo Palacios; Sina Bavari; Peter B Jahrling; Jens H Kuhn
Journal:  FEMS Microbiol Rev       Date:  2016-06-05       Impact factor: 16.408

9.  Broadly neutralizing antibodies from human survivors target a conserved site in the Ebola virus glycoprotein HR2-MPER region.

Authors:  Andrew I Flyak; Natalia Kuzmina; Charles D Murin; Christopher Bryan; Edgar Davidson; Pavlo Gilchuk; Christopher P Gulka; Philipp A Ilinykh; Xiaoli Shen; Kai Huang; Palaniappan Ramanathan; Hannah Turner; Marnie L Fusco; Rebecca Lampley; Nurgun Kose; Hannah King; Gopal Sapparapu; Benjamin J Doranz; Thomas G Ksiazek; David W Wright; Erica Ollmann Saphire; Andrew B Ward; Alexander Bukreyev; James E Crowe
Journal:  Nat Microbiol       Date:  2018-05-07       Impact factor: 17.745

10.  Proteo-Genomic Analysis Identifies Two Major Sites of Vulnerability on Ebolavirus Glycoprotein for Neutralizing Antibodies in Convalescent Human Plasma.

Authors:  Pavlo Gilchuk; Adrian Guthals; Stefano R Bonissone; Jared B Shaw; Philipp A Ilinykh; Kai Huang; Robin G Bombardi; Jenny Liang; Ariadna Grinyo; Edgar Davidson; Elaine C Chen; Bronwyn M Gunn; Galit Alter; Erica Ollmann Saphire; Benjamin J Doranz; Alexander Bukreyev; Larry Zeitlin; Natalie Castellana; James E Crowe
Journal:  Front Immunol       Date:  2021-07-16       Impact factor: 7.561

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