| Literature DB >> 26812236 |
Joseph A Lewnard1, Marina Antillón1,2, Gregg Gonsalves1,2,3, Alice M Miller2,3,4, Albert I Ko1,2,5, Virginia E Pitzer1.
Abstract
BACKGROUND: Introduction of Vibrio cholerae to Haiti during the deployment of United Nations (UN) peacekeepers in 2010 resulted in one of the largest cholera epidemics of the modern era. Following the outbreak, a UN-commissioned independent panel recommended three pre-deployment intervention strategies to minimize the risk of cholera introduction in future peacekeeping operations: screening for V. cholerae carriage, administering prophylactic antimicrobial chemotherapies, or immunizing with oral cholera vaccines. However, uncertainty regarding the effectiveness of these approaches has forestalled their implementation by the UN. We assessed how the interventions would have impacted the likelihood of the Haiti cholera epidemic. METHODS ANDEntities:
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Year: 2016 PMID: 26812236 PMCID: PMC4727895 DOI: 10.1371/journal.pmed.1001947
Source DB: PubMed Journal: PLoS Med ISSN: 1549-1277 Impact factor: 11.069
Fig 1Epidemiological dynamics.
We illustrate model-data concordance by plotting case observations (points) along with sample paths from stochastic realizations of the model (n = 100) under the status-quo scenario used for fitting. We plot instances (n = 79) in which transmission ensued and omit those where no epidemic occurred (n = 21). (A): Cases in the Artibonite-adjacent communes; (B): cases in all other communes.
Fixed model parameters for cholera progression.
| Parameter | Definition | Value | Source |
|---|---|---|---|
| 1/ | Mean incubation period (d) | 1.55 | [ |
| 1/ | Expected duration of carriage (d) | 5.09 | [ |
| 1/ | Expected duration of diarrhea (d) | 3.32 | [ |
| 1/ | Expected duration of convalescent phase | 1.77 | [ |
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| Hyperinfectivity multiplier | 100 | [ |
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| Diarrheal relative stool volume ( | 8.58 | [ |
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| Daily | 1 | (Fixed) |
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| 0.1 | (Fixed) |
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| Case fatality rate | 2.5% | [ |
| Σ | Population of Haiti (2010) | 9,923,243 | [ |
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| Population of Artibonite-adjacent communes (2010) | 879,644 | [ |
aParameters’ relation to cholera natural history and transmission is detailed S1 Text §3.1.
bEstimates for the cholera infectious dose have varied widely in volunteer challenge trials due to host-level factors as well as whether individuals ingested V. cholerae with or without bicarbonate buffer solution, precluding numerical interpretation of the relation between the environmental exposure rate (β ), ξ, and κ. As a flexible alternative to previous models that sought to quantify V. cholerae exposure directly, we fixed ξ and κ as numerical constants and estimated β values corresponding to exposure levels requisite for inducing infections as they were observed in Haiti.
Estimated parameters for transmission dynamics in Haiti.
| Parameter | Definition | Prior | Source | Estimate |
|---|---|---|---|---|
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| Symptom probability ( | Beta(263, 812) | [ | 0.241 (0.219, 0.267) |
| Log10( | Environmental | Unif(–∞, –3) | [ | –6.665 (–6.676, –6.653) |
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| Contact rate with | Unif(0.1, 0.6) | 0.219 (0.184, 0.260) | |
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| Scaling constant for local transmission | Unif(0, 106) | 1201 (1010, 1413) | |
| Log10( | Migration rate (d–1) | Unif(–2,–0.3) | –1.314 (–1.331, –1.29) | |
| Log10( | Proportion exposed to Artibonite ( | Unif(–3, –1) | [ | –1.618 (–1.630, –1.608) |
aEstimates are presented for the case r = Log10(ν) and the initial condition of one peacekeeper arriving infected. Estimates for differing r and initial conditions are presented in S15 Table.
bEstimates are reported as median (95% CrI) describing the distribution generated by Markov Chain Monte Carlo sampling.
cThe informative prior applied for estimating the symptom probability results from a serological survey measuring symptom probabilities during the initial outbreak in the study region [43] (n = 948) and a challenge study estimating the probability for cholera-naïve individuals to experience symptoms when exposed to V. cholerae [42] (n = 127), in contrast to the symptom probability for endemic settings estimated in S1 Table (S1 Text §4.2).
dExponentiated: (2.161 (2.108, 2.226)) × 10−7 per bacterial unit per day (see S1 Text §3.2).
eSmaller values represent more clustered local transmission, while larger values represent more homogeneous mixing (see S1 Text §3.2).
fExponentiated: 0.0485 (0.0467, 0.0507) per day.
gExponentiated: 0.0241 (0.0234, 0.0247)
Fig 2Intervention timeline.
Events in 2010 are listed on the left alongside the timeframe for the simulated interventions: (I) RDT screening, (IIa) time-of-departure prophylaxis with antimicrobial drugs, (IIb) early-initiated prophylaxis with antimicrobial drugs beginning 7 d prior to deployment, (III) two-dose OCV immunization at 36 and 22 d prior to deployment, (IVa) two-dose OCV immunization combined with time-of-departure chemoprophylaxis, and (IVb) two-dose OCV immunization combined with early-initiated chemoprophylaxis.
Individual-level intervention efficacy.
| Parameter | Definition | Value | Source |
|---|---|---|---|
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| Relative infectiousness of OCV recipients ( | 0.0097–0.5 (varied); 0.0194 (Main Text) | [ |
| Se | RDT sensitivity ( | 96.0% (89.4%, 99.1%) | [ |
| Sp | RDT specificity ( | 92.4% (85.0%, 97.5%) | [ |
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| Relative risk for cholera shedding ( | 34.3% (18.1%, 65.3%) | [ |
| 1/ | Reduction in duration of shedding (d) ( | 2.74 (2.40, 3.07) | [ |
aValues are presented as median (95% CrI) based on distributions measured in cited studies or inferred from the reported data. We propagated uncertainty in intervention efficacy by population simulations with Monte Carlo draws from the estimated or reported distributions.
bTest sensitivity and specificity are assumed to follow Beta distributions inferred by the approach described in S1 Text (§2.2).
cSensitivity and specificity are calculated for the cholera O1 dipstick test and compared to culture as a gold standard.
Importation probabilities under status quo and intervention scenarios, with estimated effectiveness against importation.
| Intervention | Outcome measure (%) | Background cholera incidence rate | |||||
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| 0.5/1,000 PYAR | 1.0/1,000 PYAR | 1.8/1,000 PYAR | 2.0/1,000 PYAR | 5.0/1,000 PYAR | 10.0/1,000 PYAR | ||
| Status quo | Probability | 0.8 (0.4, 1.6) | 1.6 (0.7, 3.1) |
| 3.2 (1.4, 6.1) | 7.7 (3.6, 14.5) | 14.8 (7.0, 26.9) |
| RDT screening | Probability | 0.2 (0.1, 0.3) | 0.3 (0.1, 0.6) |
| 0.6 (0.3, 1.2) | 1.5 (0.7, 2.9) | 2.9 (1.3, 5.8) |
| Effectiveness | 81.7 (76.1, 84.5) | 81.7 (76.0, 84.5) |
| 81.5 (75.9, 84.4) | 81.2 (75.4, 84.1) | 80.5 (74.5, 83.6) | |
| Time-of-departure prophylaxis | Probability | 0.5 (0.2, 1.0) | 1.0 (0.4, 1.9) |
| 1.9 (0.9, 3.8) | 4.8 (2.2, 9.1) | 9.3 (4.3, 17.4) |
| Effectiveness | 39.3 (30.9, 47.1) | 39.2 (30.8, 47.0) |
| 39.0 (30.5, 46.9) | 38.4 (29.7, 46.6) | 37.4 (28.3, 46.0) | |
| Early-initiated prophylaxis | Probability | 0.1 (0.0, 0.3) | 0.2 (0.1, 0.6) |
| 0.4 (0.1, 1.1) | 0.8 (0.3, 2.8) | 1.7 (0.5, 5.5) |
| Effectiveness | 89.1 (74.0, 95.0) | 89.0 (74.0, 95.0) |
| 88.9 (73.8, 94.9) | 88.7 (73.3, 94.8) | 88.3 (72.3, 94.6) | |
PYAR: person-years at risk (incidence rate denominator).
aReported probabilities refer to the likelihood that at least one peacekeeper in a battalion of 454 arrives experiencing asymptomatic infection after 2 d in transit from a source country with the designated background cholera incidence rate. Effectiveness is defined as the reduction in this probability relative to its estimate under status quo protocols. Estimates are reported as median (95% CrI), as obtained via the binomial distribution parameterized according to the procedures described in S1 Text §1.1.
bThe incidence of cholera among adults in Nepal was previously estimated to be 1.8/1,000 PYAR [1].
Estimated basic reproduction numbers (R 0).
| Initial conditions | Basic reproduction number ( | ||||
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| Geographical area | Transmission pathway | ||||
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| Number of infected arrivals | 1 | 1.80 (1.64, 2.01) | 1.14 (0.97, 1.34) | 30.29 (30.09, 30.50) | 1.07 (0.91, 1.28) |
| 2 | 1.59 (1.44, 1.79) | 0.97 (0.82, 1.17) | 26.65 (26.48, 26.83) | 0.91 (0.76, 1.11) | |
| 3 | 1.48 (1.36, 1.66) | 0.89 (0.77, 1.07) | 24.68 (24.52, 24.83) | 0.83 (0.71, 1.02) | |
| Background cholera incidence rate | 0.5/1,000 PYAR | 1.80 (1.64, 2.01) | 1.14 (0.97, 1.34) | 30.27 (30.07, 30.48) | 1.07 (0.91, 1.28) |
| 1.0/1,000 PYAR | 1.80 (1.64, 2.01) | 1.14 (0.98, 1.34) | 30.26 (30.06, 30.47) | 1.07 (0.91, 1.28) | |
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| 2.0/1,000 PYAR | 1.80 (1.64, 2.00) | 1.14 (0.98, 1.34) | 30.23 (30.02, 30.44) | 1.07 (0.91, 1.27) | |
| 5.0/1,000 PYAR | 1.79 (1.64, 1.99) | 1.13 (0.97, 1.33) | 30.14 (29.91, 30.36) | 1.07 (0.91, 1.26) | |
| 10.0/1,000 PYAR | 1.79 (1.63, 1.97) | 1.13 (0.97, 1.31) | 29.99 (29.68, 30.25) | 1.06 (0.91, 1.25) | |
PYAR: person-years at risk (incidence rate denominator).
a R 0 estimates are reported as median (95% CrI) from the posterior distribution of the parameters fitted under assumptions of one, two, or three infected peacekeepers at the outset of the epidemic. We derive the formula for R 0 via the next-generation matrix approach of [56] (S1 Text §3.9).
bIncidence-rate-specific R 0 estimates are obtained by pooling estimates across parameter sets according to the binomial probabilities of one, two, or three infected peacekeepers arriving (S1 Text §1.1).
cThe incidence of cholera among adults in Nepal was previously estimated to be 1.8/1,000 PYAR [1].
Case probabilities following importation by one, two, or three peacekeepers.
| Intervention | Outcome measure (%) | Infectious arrivals | ||
|---|---|---|---|---|
| 1 | 2 | 3 | ||
| Status quo | Case probability | 82.2 (81.1, 83.2) | 95.9 (95.3, 96.4) | 99.1 (98.9, 99.4) |
| Antimicrobial chemoprophylaxis (ACP) | Case probability | 67.5 (66.2, 68.8) | 87.8 (86.8, 88.7) | 95.4 (94.8, 96.0) |
| Effectiveness | 17.8 (16.0, 19.8) | 8.4 (7.4, 9.5) | 3.8 (3.2, 4.4) | |
| Oral cholera vaccination (OCV) | Case probability | 32.1 (30.8, 33.4) | 49.9 (48.5, 51.3) | 59.8 (58.5, 61.2) |
| Effectiveness | 61.0 (59.3, 62.7) | 47.9 (46.4, 49.4) | 39.6 (38.3, 41.0) | |
| Combined ACP | Case probability | 17.3 (16.3, 18.4) | 29.7 (28.5, 31.0) | 38.3 (36.9, 39.6) |
| Effectiveness | 78.9 (77.6, 80.2) | 69.0 (67.7, 70.3) | 61.4 (60.0, 62.7) | |
aThe case probability outcome measure is defined as the likelihood for at least one symptomatic cholera case to occur among members of the host community following arrival of one, two, or three infected peacekeepers.
bEffectiveness is defined as the reduction in this probability relative to its estimate under status quo.
cEstimates are reported as median (95% CrI), as obtained via bootstrap resampling.
dEstimates apply to both early-initiated and time-of-departure chemoprophylaxis schedules; the rate at which prophylaxed individuals clear infection is the same under both schedules, whereas the interventions differ in probabilities for arrival of one, two, or three infected peacekeepers
Total reduction in case probability afforded by interventions, with estimated intervention effectiveness.
| Outcome measure (%) | Background cholera incidence rate | Status quo | Rapid diagnostic testing (RDT) | Antimicrobial chemoprophylaxis (ACP) | Oral cholera vaccine (OCV) | Combined ACP and OCV | ||
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| Case probability | 0.5/1000 PYAR | 0.7 (0.3, 1.3) | 0.1 (0.1, 0.2) | 0.3 (0.1, 0.7) | 0.1 (0.0, 0.2) | 0.3 (0.1, 0.5) | 0.1 (0.0, 0.2) | 0.02 (0.004, 0.05) |
| 1.0/1000 PYAR | 1.3 (0.6, 2.5) | 0.2 (0.1, 0.5) | 0.7 (0.3, 1.4) | 0.1 (0.0, 0.4) | 0.5 (0.2, 1.0) | 0.2 (0.1, 0.4) | 0.03 (0.01, 0.1) | |
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| 2.0/1000 PYAR | 2.6 (1.2, 5.0) | 0.5 (0.2, 1.0) | 1.3 (0.5, 2.8) | 0.2 (0.1, 0.8) | 1.0 (0.5, 2.0) | 0.3 (0.1, 0.7) | 0.1 (0.0, 0.2) | |
| 5.0/1000 PYAR | 6.4 (3.0, 11.9) | 1.2 (0.5, 2.4) | 3.2 (1.3, 6.7) | 0.6 (0.2, 1.9) | 2.5 (1.2, 4.8) | 0.8 (0.3, 1.8) | 0.2 (0.0, 0.5) | |
| 10.0/1000 PYAR | 12.4 (5.8, 22.4) | 2.4 (1.1, 4.8) | 6.4 (2.6, 13.0) | 1.2 (0.3, 3.8) | 5.0 (2.3, 9.2) | 1.7 (0.7, 3.5) | 0.3 (0.1, 1.0) | |
| Effectiveness | 0.5/1000 PYAR | 81.7 (76.1, 84.5) | 50.1 (43.1, 56.5) | 91.0 (78.7, 95.9) | 60.9 (59.3, 62.6) | 87.2 (85.2, 89.0) | 97.7 (94.5, 98.9) | |
| 1.0/1000 PYAR | 81.7 (76.1, 84.5) | 50.0 (42.9, 56.5) | 91.0 (78.6, 95.9) | 60.9 (59.2, 62.5) | 87.2 (85.2, 89.0) | 97.7 (94.5, 98.9) | ||
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| 2.0/1000 PYAR | 81.6 (75.9, 84.4) | 49.8 (42.7, 56.4) | 90.9 (78.5, 95.8) | 60.7 (59.1, 62.4) | 87.1 (85.0, 88.9) | 97.7 (94.5, 98.9) | ||
| 5.0/1000 PYAR | 81.3 (75.6, 84.2) | 49.3 (41.9, 56.2) | 90.8 (78.1, 95.8) | 60.4 (58.7, 62.0) | 87.9 (84.7, 88.8) | 97.6 (94.3, 98.9) | ||
| 10.0/1000 PYAR | 80.7 (74.8, 83.7) | 48.5 (40.6, 55.8) | 90.4 (77.5, 95.7) | 59.7 (58.0, 61.5) | 86.5 (84.1, 88.6) | 97.6 (94.1, 98.9) | ||
PYAR: person-years at risk (incidence rate denominator).
aCase probabilities refer to the likelihood that at least one symptomatic cholera case occurs in the community. Effectiveness is defined as the reduction in this probability relative to its estimate under status quo protocols.
bEstimates are reported as median (95% CrI), as obtained via bootstrap resampling.
cThe incidence of cholera among adults in Nepal was previously estimated to be 1.8/1000 PYAR [1].
Benefit to peacekeepers.
| Reduction in probability of cholera diarrhea (%) | Source | |
|---|---|---|
| Antimicrobial chemoprophylaxis (ACP) | 95.5 (70.4, 99.9) | [ |
| Oral cholera vaccine (OCV) | 62.8 (22.2, 90.0) | [ |
| Combined ACP and OCV | 98.0 (84.9, 99.9) | [ |
aEstimates are reported as median (95% CrI) as estimated by the approach described in S1 Text (§2.5).
Intervention costs.
| Intervention | Method | Direct cost per peacekeeper | Indirect costs and considerations |
|---|---|---|---|
| Rapid diagnostic screening | Crystal VC cholera dipstick (Span Diagnostics, Surat, India) | US$2.54 [ | Direct costs do not include the cost of laboratory personnel to perform sample enrichment and rectal swabbing, which are likely to exceed the cost of assays [ |
| Single-dose antimicrobial chemotherapy at time of departure | Conventional antimicrobial agents [ | US$0.03–US$0.12 (Doxycycline); US$0.08–US$0.40 (Ciprofloxacin) [ | High compliance can be expected with a single-dose regimen |
| Azithromycin | US$0.52–US$1.32 [ | ||
| Early-initiated antimicrobial chemotherapy beginning 1 wk prior to departure | 3-d course with conventional antimicrobial agents | US$0.24–US$0.48 [ | Lower treatment compliance may be expected if peacekeepers are required to take therapies during their leave period. |
| Oral cholera vaccine | Killed bivalent whole-cell vaccine without B subunit (Shanchol, Shantha Biotechnics, Hyderabad, India) | US$3.70 [ | Direct costs do not include those associated with cold chain shipment and storage infrastructure. Vaccine must be administered 5 wk before departure ( |
| Killed bivalent whole-cell vaccine with B subunit (Dukoral, Janssen, Inc., Toronto, Canada) | US$9.40–US$18.80 [ |
aCosts are presented in current US dollars.
bRanges represent lower bound–upper bound based on reported costs in the cited sources.
cSingle-dose antimicrobial regimens consider 300 mg of doxycycline (WHO recommendation [8]) and 1,000 mg of ciprofloxacin.
dEarly-initiated antimicrobial chemoprophylaxis consider 500 mg of tetracycline administered four times daily for 3 d (WHO recommendation [8]).