Literature DB >> 26811657

Genomic and epigenomic heterogeneity in molecular subtypes of gastric cancer.

Byungho Lim1, Jong-Hwan Kim1, Mirang Kim1, Seon-Young Kim1.   

Abstract

Gastric cancer is a complex disease that is affected by multiple genetic and environmental factors. For the precise diagnosis and effective treatment of gastric cancer, the heterogeneity of the disease must be simplified; one way to achieve this is by dividing the disease into subgroups. Toward this effort, recent advances in high-throughput sequencing technology have revealed four molecular subtypes of gastric cancer, which are classified as Epstein-Barr virus-positive, microsatellite instability, genomically stable, and chromosomal instability subtypes. We anticipate that this molecular subtyping will help to extend our knowledge for basic research purposes and will be valuable for clinical use. Here, we review the genomic and epigenomic heterogeneity of the four molecular subtypes of gastric cancer. We also describe a mutational meta-analysis and a reanalysis of DNA methylation that were performed using previously reported gastric cancer datasets.

Entities:  

Keywords:  DNA methylation; Gastric cancer; Molecular subtype; Mutation; Next-generation sequencing

Mesh:

Substances:

Year:  2016        PMID: 26811657      PMCID: PMC4716030          DOI: 10.3748/wjg.v22.i3.1190

Source DB:  PubMed          Journal:  World J Gastroenterol        ISSN: 1007-9327            Impact factor:   5.742


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