Literature DB >> 26809969

Response to "Cross-Species Application of SNP Chips is Not Suitable for Identifying Runs of Homozygosity" by Shafer, Miller, and Kardos.

Veronika Kharzinova1, Alexander A Sermyagin2, Elena A Gladyr2, Gottfried Brem2, Natalia A Zinovieva2.   

Abstract

Mesh:

Year:  2016        PMID: 26809969      PMCID: PMC4892424          DOI: 10.1093/jhered/esv139

Source DB:  PubMed          Journal:  J Hered        ISSN: 0022-1503            Impact factor:   2.645


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  9 in total

1.  Cross-Species Application of SNP Chips is Not Suitable for Identifying Runs of Homozygosity.

Authors:  Aaron B A Shafer; Joshua M Miller; Marty Kardos
Journal:  J Hered       Date:  2016-01-15       Impact factor: 2.645

2.  PLINK: a tool set for whole-genome association and population-based linkage analyses.

Authors:  Shaun Purcell; Benjamin Neale; Kathe Todd-Brown; Lori Thomas; Manuel A R Ferreira; David Bender; Julian Maller; Pamela Sklar; Paul I W de Bakker; Mark J Daly; Pak C Sham
Journal:  Am J Hum Genet       Date:  2007-07-25       Impact factor: 11.025

3.  A genome-wide perspective on the evolutionary history of enigmatic wolf-like canids.

Authors:  Bridgett M vonHoldt; John P Pollinger; Dent A Earl; James C Knowles; Adam R Boyko; Heidi Parker; Eli Geffen; Malgorzata Pilot; Wlodzimierz Jedrzejewski; Bogumila Jedrzejewska; Vadim Sidorovich; Claudia Greco; Ettore Randi; Marco Musiani; Roland Kays; Carlos D Bustamante; Elaine A Ostrander; John Novembre; Robert K Wayne
Journal:  Genome Res       Date:  2011-05-12       Impact factor: 9.043

4.  A genome-wide set of SNPs detects population substructure and long range linkage disequilibrium in wild sheep.

Authors:  J M Miller; J Poissant; J W Kijas; D W Coltman
Journal:  Mol Ecol Resour       Date:  2010-09-10       Impact factor: 7.090

5.  No evidence of inbreeding avoidance in a polygynous ungulate: the reindeer (Rangifer tarandus).

Authors:  Oystein Holand; Kjartan R Askim; Knut H Røed; Robert B Weladji; Hallvard Gjøstein; Mauri Nieminen
Journal:  Biol Lett       Date:  2007-02-22       Impact factor: 3.703

6.  A Study of Applicability of SNP Chips Developed for Bovine and Ovine Species to Whole-Genome Analysis of Reindeer Rangifer tarandus.

Authors:  Veronika R Kharzinova; Alexander A Sermyagin; Elena A Gladyr; Innokentiy M Okhlopkov; Gottfried Brem; Natalia A Zinovieva
Journal:  J Hered       Date:  2015-10-07       Impact factor: 2.645

7.  Identification of novel single nucleotide polymorphisms (SNPs) in deer (Odocoileus spp.) using the BovineSNP50 BeadChip.

Authors:  Gwilym D Haynes; Emily K Latch
Journal:  PLoS One       Date:  2012-05-08       Impact factor: 3.240

8.  Runs of homozygosity and population history in cattle.

Authors:  Deirdre C Purfield; Donagh P Berry; Sinead McParland; Daniel G Bradley
Journal:  BMC Genet       Date:  2012-08-14       Impact factor: 2.797

9.  Cross-amplification and validation of SNPs conserved over 44 million years between seals and dogs.

Authors:  Joseph I Hoffman; Michael A S Thorne; Rob McEwing; Jaume Forcada; Rob Ogden
Journal:  PLoS One       Date:  2013-07-16       Impact factor: 3.240

  9 in total

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