Izabela Szymońska1, Thore Langfeldt Borgenvik2, Tina Margrethe Karlsvik2, Anders Halsen2, Bianka Kathryn Malecki3, Sindre Ervik Saetre2, Mateusz Jagła1, Piotr Kruczek1, Anna Madetko Talowska4, Grażyna Drabik5, Magdalena Zasada1, Marek Malecki6. 1. Department of Pediatrics, Jagiellonian University Medical College, Krakow, Poland, EU. 2. Jagiellonian University Medical College, Krakow, Poland, EU. 3. Jagiellonian University Medical College, Krakow, Poland, EU; Phoenix Biomolecular Engineering Foundation, San Francisco, CA, USA. 4. Department of Clinical Genetics, Jagiellonian University Medical College, Krakow, Poland, EU. 5. Department of Pathology, Children's University Hospital, Kraków, Poland, EU. 6. Phoenix Biomolecular Engineering Foundation, San Francisco, CA, USA; NMRFM, National Institutes of Health, Madison, WI, USA; University of Wisconsin, Madison, WI, USA.
Abstract
INTRODUCTION: Neuroblastoma (NB), Hirschsprung disease (HSCR), Congenital Central Hypoventilation Syndrome (CCHS), clinically referred as the NB-HSCR-CCHS cluster, are genetic disorders linked to mutations in the PHOX2B gene on chromosome 4p12. SPECIFIC AIM: The specific aim of this project is to define the PHOX2B gene mutations as the genomic basis for the clinical manifestations of the NB-HSCR-CCHS cluster. PATIENT: A one day old male patient presented to the Jagiellonian University Medical College (JUMC), American Children Hospital, neonatal Intensive Care Unit (ICU) due to abdominal distention, vomiting, and severe apneic episodes. With the preliminary diagnosis of the NB-HSCR-CCHS, the blood and tissue samples were acquired from the child, as well as from the child's parents. All procedures were pursued in accordance with the Declaration of Helsinki, with the patient's Guardian Informed Consent and the approval from the Institutional Review Board. GENETIC/GENOMIC METHODS: Karyotyping was analyzed based upon Giemsa banding. The patient's genomic DNA was extracted from peripheral blood and amplified by polymerase chain reaction. Direct microfluidic Sanger sequencing was performed on the genomic DNA amplicons. These procedures were pursued in addition to the routine clinical examinations and tests. RESULTS: G-banding showed the normal 46 XY karyotype. However, genomic sequencing revealed a novel, heterozygous deletion (8 nucleotides: c.699-706, del8) in exon 3 of the PHOX2B gene on chromosome 4. This led to the frame-shift mutation and malfunctioning gene expression product. CONCLUSION: Herein, we report a novel PHOX2B gene mutation in the patient diagnosed with the NB-HSCR-CCHS cluster. The resulting gene expression product may be a contributor to the clinical manifestations of these genetic disorders. It adds to the library of the mutations linked to this syndrome. Consequently, we suggest that screening for the PHOX2B mutations becomes an integral part of genetic counseling, genomic sequencing of fetal circulating nucleic acids and / or genomes of circulating fetal cells prenatally, while preparing supportive therapy upon delivery, as well as on neonates' genomes of intubated infants, when breathing difficulties occur upon extubation. Further, we hypothesize that PHOX2B may be considered as a potential target for gene therapy.
INTRODUCTION: Neuroblastoma (NB), Hirschsprung disease (HSCR), Congenital Central Hypoventilation Syndrome (CCHS), clinically referred as the NB-HSCR-CCHS cluster, are genetic disorders linked to mutations in the PHOX2B gene on chromosome 4p12. SPECIFIC AIM: The specific aim of this project is to define the PHOX2B gene mutations as the genomic basis for the clinical manifestations of the NB-HSCR-CCHS cluster. PATIENT: A one day old male patient presented to the Jagiellonian University Medical College (JUMC), American Children Hospital, neonatal Intensive Care Unit (ICU) due to abdominal distention, vomiting, and severe apneic episodes. With the preliminary diagnosis of the NB-HSCR-CCHS, the blood and tissue samples were acquired from the child, as well as from the child's parents. All procedures were pursued in accordance with the Declaration of Helsinki, with the patient's Guardian Informed Consent and the approval from the Institutional Review Board. GENETIC/GENOMIC METHODS: Karyotyping was analyzed based upon Giemsa banding. The patient's genomic DNA was extracted from peripheral blood and amplified by polymerase chain reaction. Direct microfluidic Sanger sequencing was performed on the genomic DNA amplicons. These procedures were pursued in addition to the routine clinical examinations and tests. RESULTS: G-banding showed the normal 46 XY karyotype. However, genomic sequencing revealed a novel, heterozygous deletion (8 nucleotides: c.699-706, del8) in exon 3 of the PHOX2B gene on chromosome 4. This led to the frame-shift mutation and malfunctioning gene expression product. CONCLUSION: Herein, we report a novel PHOX2B gene mutation in the patient diagnosed with the NB-HSCR-CCHS cluster. The resulting gene expression product may be a contributor to the clinical manifestations of these genetic disorders. It adds to the library of the mutations linked to this syndrome. Consequently, we suggest that screening for the PHOX2B mutations becomes an integral part of genetic counseling, genomic sequencing of fetal circulating nucleic acids and / or genomes of circulating fetal cells prenatally, while preparing supportive therapy upon delivery, as well as on neonates' genomes of intubated infants, when breathing difficulties occur upon extubation. Further, we hypothesize that PHOX2B may be considered as a potential target for gene therapy.
Entities:
Keywords:
4p12; Aganglionosis of the Terminal Bowel (ATB); Congenital Central Hypoventilation Syndrome (CCHS); Haddad syndrome; Hirschsprung’s disease (HSCR); NB-HSCR-CCHS; Neuroblastoma (NB); Neurocristopathy; PHOX2B; SOX10; deletion; mutation
Authors: Germaine Liebrechts-Akkerman; Fan Liu; Oscar Lao; Ariadne H A G Ooms; Kate van Duijn; Mark Vermeulen; Vincent W Jaddoe; Albert Hofman; Adèle C Engelberts; Manfred Kayser Journal: Int J Legal Med Date: 2014-01-18 Impact factor: 2.686
Authors: Delphine Trochet; Louise M O'Brien; David Gozal; Ha Trang; Agneta Nordenskjöld; Béatrice Laudier; Pär-Johan Svensson; Sabine Uhrig; Trevor Cole; Stephan Niemann; Arnold Munnich; Claude Gaultier; Stanislas Lyonnet; Jeanne Amiel Journal: Am J Hum Genet Date: 2005-01-18 Impact factor: 11.025
Authors: Elizabeth M Berry-Kravis; Lili Zhou; Casey M Rand; Debra E Weese-Mayer Journal: Am J Respir Crit Care Med Date: 2006-08-03 Impact factor: 21.405
Authors: S Parodi; C Vollono; M P Baglietto; M Balestri; M Di Duca; P A Landri; I Ceccherini; G Ottonello; M R Cilio Journal: Clin Genet Date: 2010-02-11 Impact factor: 4.438
Authors: Debra E Weese-Mayer; Elizabeth M Berry-Kravis; Isabella Ceccherini; Thomas G Keens; Darius A Loghmanee; Ha Trang Journal: Am J Respir Crit Care Med Date: 2010-03-15 Impact factor: 21.405
Authors: Debra E Weese-Mayer; Casey M Rand; Elizabeth M Berry-Kravis; Larry J Jennings; Darius A Loghmanee; Pallavi P Patwari; Isabella Ceccherini Journal: Pediatr Pulmonol Date: 2009-06
Authors: Wolfram Windisch; Ellen Hennings; Jan Hendrik Storre; Heinrich Matthys; Stephan Sorichter Journal: Respiration Date: 2004 Mar-Apr Impact factor: 3.580