| Literature DB >> 26793275 |
Nuntiya Maneechot1, Cassia Fernanda Yano2, Luiz Antonio Carlos Bertollo2, Nuntaporn Getlekha1, Wagner Franco Molina3, Sukhonthip Ditcharoen1, Bundit Tengjaroenkul4, Weerayuth Supiwong5, Alongklod Tanomtong6, Marcelo de Bello Cioffi2.
Abstract
BACKGROUND: The genus Clarias (Clariidae, Siluriformes) contains at least 61 species naturally spread over vast regions of Asia, India and Africa. However, Clarias species have also been introduced in many different countries and represent the most widespread catfishes in the world. These fishes are also known as "walking catfishes" due to their ability to move over land. A large degree of chromosomal variation has been previously found in this family, mainly using conventional cytogenetic investigations, with diploid chromosome numbers ranging between 48 and 100. In this study, we analyzed the karyotype structure and distribution of four repetitive DNA sequences (5S and 18S rDNAs and (CA)15 and (GA)15 microsatellites) in three Clarias species (C. batrachus, C. gariepinus, C. macrocephalus), as well as in a probable natural hybrid of the two latter species from different Thailand river basins.Entities:
Keywords: Centric fission; Chromosomal rearrangements; FISH; Karyotype evolution; Molecular cytogenetics
Year: 2016 PMID: 26793275 PMCID: PMC4719708 DOI: 10.1186/s13039-016-0215-2
Source DB: PubMed Journal: Mol Cytogenet ISSN: 1755-8166 Impact factor: 2.009
Review of available data on 2n, karyotypes and sex systems in the genus Clarias
| Species | 2n | NF | Karyotype | Sex system | Locality | Reference |
|---|---|---|---|---|---|---|
|
| 48 | 75 | 4 m + 23sm + 21a | ZW | Nigeria | [ |
|
| 48 | 74 | 4 m + 22sm + 22a | ZZ | Nigeria | [ |
|
| 56 | 91 | 8 m + 27sm + 21a | ZW | Nigeria | [ |
|
| 56 | 90 | 8 m + 26sm + 22a | ZZ | Nigeria | [ |
|
| 48 | – | 27 m + 10sm + 3st + 8 t | – | Nigeria | [ |
|
| 56 | – | 33 m + 12sm + 2st + 9 t | – | Nigeria | [ |
|
| 100 | 111 | 4 m + 7sm + 77a + 12mc | XY | Thailand | [ |
|
| 56 | – | – | China | [ | |
|
| 100 | 110 | 4 m + 6sm + 78a + 12mc | XX | Thailand | [ |
|
| 50 | 88 | 16 m + 8sm + 14st + 12a | India | [ | |
|
| 50 | 96 | 18 m + 20sm + 8st + 4a | India | [ | |
|
| 54 | – | [ | |||
|
| 50 | 89 | 16 m + 11sm + 5st + 1at | ZW | India | [ |
|
| 50 | 88 | 16 m + 10sm + 6st + 18a | ZZ | India | [ |
|
| 51 | 89 | 16 m + 11sm + 5st + 18a + 1B-chromosome | ZW | India | [ |
|
| 51 | 88 | 16 m + 10sm + 6st + 18a + 1B-chromosome | ZZ | India | [ |
|
| 50 | 96 | 12 m + 18sm + 10st + 10 t | – | India | [ |
|
| 50 | 90 | 11 m + 7sm + 2st + 34a | – | Malaysia | [ |
|
| 54 | 74 | 12 m + 18sm + 10st + 14 t | – | India | [ |
| C. batrachus | 104 | – | 2 m + 4sm + 98st/a | - | Thailand | Present study |
|
| 54 | – | – | – | Africa | [ |
|
| 56 | – | 22 m + 20sm + 9st + 5 t | - | Nigeria | [ |
|
| 50 | – | – | – | Africa | [ |
|
| 48 | 77 | 6 m + 23sm + 19a | ZW | Nigeria | [ |
|
| 48 | 76 | 6 m + 22sm + 20a | ZZ | Nigeria | [ |
|
| 56 | 106 | 18 m + 24sm + 8st + 6a | XX | China | [ |
|
| 56 | 106 | 19 m + 23sm + 8st + 6a | XY | China | [ |
|
| 56 | 106 | 20 m + 22sm + 8st + 6a | XX | China | [ |
|
| 56 | 106 | 20 m + 22sm + 8st + 6a | XY | China | [ |
|
| 56 | 102 | 18 m + 14sm + 14st + 10a | XX,XY | China | [ |
|
| 56 | 88 | 32 m/sm + 24st/a | – | Japan | [ |
|
| 56 | 89 | 8 m + 25sm + 23a | ZW | Africa, Israel | [ |
|
| 56 | 88 | 8 m + 24sm + 24a | ZZ | Africa, Israel | [ |
|
| 56 | 87 | 14 m + 17sm + 25a | ZW | Egypt | [ |
|
| 56 | 88 | 14 m + 18sm + 24a | ZZ | Egypt | [ |
|
| 56 | 102 | 20 m + 16sm + 10st + 10a | – | India | [ |
|
| 56 | 89 | 8 m + 25sm + 23a | ZW | Nigeria | [ |
|
| 56 | 88 | 8 m + 24sm + 24a | ZZ | Nigeria | [ |
|
| 56 | 96 | 21 m + 14sm + 5st + 16a | – | Malaysia | [ |
|
| 56 | – | 25 m + 14sm + 14st + 3 t | – | Nigeria | [ |
|
| 56 | 100 | 28 m + 6sm + 10a + 12 t | – | Turkey | [ |
|
| 56 | 100 | 24 m + 10sm + 10a + 12 t | – | Turkey | [ |
|
| 54 | 98 | 34 m + 10sm + 10 t | – | Nigeria | [ |
|
| 56 | 102 | 6 m + 12sm + 28st + 10a | – | Nigeria | [ |
|
| 56 | 98 | 30 m + 6sm + 6st + 14 t | – | Thailand | [71] |
|
| 56 | 110 | 18 m + 20sm + 16st + 2a | – | Thailand | Present study |
|
| 54 | – | 22 m + 12sm + 5st + 15 t | – | Nigeria | [ |
|
| 54 | 104 | 24 m + 20sm + 6st + 4a | Thailand | [ | |
|
| 54 | 98 | 22 m + 18sm + 4st + 10a | – | Malaysia | [ |
|
| 54 | 104 | 22 m + 16sm + 12st + 4a | – | Thailand | Present study |
|
| 49 | – | 27 m + 10sm + 11st + 1 t | – | Nigeria | [ |
|
| 54 | – | – | Africa | [ | |
|
| 66 | – | 30 m + 10sm + 16st + 10 t | – | Nigeria | [ |
Fig. 1Karyotypes arranged from metaphase chromosomes of Clarias gariepinus (2n = 56), Clarias macrocephalus (2n = 54) and the natural hybrid of these species (2n = 55) after Giemsa staining and FISH with 18S rDNA (red) and 5S rDNA (green) probes. Note the intermediate level of distribution of the ribosomal sites in the hybrid specimen compared to the parental species. Scale bar = 5 μm
Fig. 2Karyotypes arranged from metaphase chromosomes of Clarias batrachus (2n = 104) after Giemsa staining and FISH with 18S rDNA (red), 5S rDNA (green), and (GA)15 and (CA)15 microsatellite probes. Note the high dispersion of 5S rDNA sites in the karyotype. Scale bar = 5 μm
Fig. 3Karyotypes arranged from metaphase chromosomes of Clarias gariepinus (2n = 56), Clarias macrocephalus (2n = 54) and the natural hybrid of these species (2n = 55) after FISH with (GA)15 and (CA)15 microsatellite probes. Note the weak distribution of both microsatellites in C. gariepinus, their strong accumulation in C. macrocephalus and the intermediate distribution pattern in the hybrid specimen. Scale bar = 5 μm
Fig. 4Collection sites of Clarias species from Thailand analyzed in the present study