| Literature DB >> 26791781 |
Hamza Leulmi1,2, Atef Aouadi3,4, Idir Bitam5,6,7, Amina Bessas8, Ahmed Benakhla9, Didier Raoult10, Philippe Parola11.
Abstract
BACKGROUND: In recent years, the scope and importance of emergent vector-borne diseases has increased dramatically. In Algeria, only limited information is currently available concerning the presence and prevalence of these zoonotic diseases. For this reason, we conducted a survey of hematophagous ectoparasites of domestic mammals and/or spleens of wild animals in El Tarf and Souk Ahras, Algeria.Entities:
Mesh:
Year: 2016 PMID: 26791781 PMCID: PMC4721140 DOI: 10.1186/s13071-016-1316-9
Source DB: PubMed Journal: Parasit Vectors ISSN: 1756-3305 Impact factor: 3.876
Target sequences, primers and probes used to confirm the detection of rickettsiae by qPCR
| Quantitative real-time PCR designation and specificity | qPCR Sytem used | Forward primer | Reverse primer | Probe |
|---|---|---|---|---|
|
| Biotin synthase | ATG-TTC-GGG-CTTCCG-GTA-TG | CCG-ATT-CAG-CAGGTT-CTT-CAA | 6-FAM- GCT-GCG-GCGGTA-TTT-TAG-GAA -TGGG-TAMRA |
|
| Scal | AAGCGGCACTTTAGGTAAAGAAA | CATGCTCTGCAAATGAACCA | 6FAM-TGGGGAAATATGCCGTATACGCAAGC -TAMRA |
|
| R.mass_9666 | CCAACCTTTTGTTGTTGCAC | TTGGATCAGTGTGACGGACT | 6FAM-CACGTGCTGCTTATACCAGCAAACA -TAMRA |
|
| R.slov | GCAACGGTTTTTGGTATCGT | AATCGAATGCACCACCACTT | 6FAM- TCCCGTCCCAGCCATTCGTC -TAMRA |
Detection of Rickettsiae, Bartonella spp., and Coxiella burnetii in arthropods
| Ectoparasite species | Localization | Animal (N) | No. of ectoparasites collected (m = male, f = female) | No. of ectoparasites tested by qPCR (m = male, f = female) |
|
|
|
|---|---|---|---|---|---|---|---|
|
| El Ghorra, El Tarf. | Cattle (123) | 316 (104 m, 212f) | 20 (10 m, 10f) | 3/20 (1 m, 2f) | - | - |
| Sheep (250) | 454 (217 m, 237f) | 20 (10 m, 10f) | 11/20 (9 m, 2f) | - | - | ||
| Goats (128) | 104 (55 m, 49f) | 20 (10 m, 10f) | - | - | - | ||
| Dogs (50) | 323 (222 m, 101f) | 20 (10 m, 10f) | 1/20 (1 m) | - | - | ||
| Cheabat El Balout, Souk Ahras | Boars (2) | 9 (5 m, 4f) | 9 (5 m, 4f) | 8/9 (5 m, 3f) | - | - | |
| Mangoose (1) | 2 (1 m, 1f) | 2 (1 m, 1f) | 2/2 (1 m, 1f) | - | - | ||
| Jackals (2) | 23 (15 m, 8f) | 23(15 m, 8f) | 13/23(8 m, 5f) | - | - | ||
| Hedgehogs (4) | 10 (2 m, 8f) | 10(2 m, 8f) | - | - | - | ||
|
| El Ghorra, El Tarf. | Cattle (123) | 50 (39 m, 11f) | 20 (10 m, 10f) | 2/20 (2f) | - | - |
| Sheep (250) | 72 (37 m, 35f) | 20 (10 m, 10f) | - | - | - | ||
| Goats (128) | 19 (19 m) | 19 (19 m) | - | - | - | ||
|
| El Ghorra, El Tarf. | Sheep (250) | 1 (1 m) | 1 (1 m) | - | - | - |
| Goats (128) | 3 (2 m, 1f) | 3 (2 m, 1f) | - | - | - | ||
|
| El Ghorra, El Tarf. | Cattle (123) | 94 (41 m, 53f) | 20 (10 m, 10f) | 6/20 (2 m, 4f) | - | - |
| Sheep (250) | 1 (1f) | 1 (1f) | - | - | - | ||
|
| El Ghorra, El Tarf. | Cattle (123) | 105 (54 m, 51f) | 20 (10 m, 10f) | 6/20 (4 m, 2f) | - | - |
|
| El Ghorra, El Tarf. | Goats (128) | 4 (4f) | 4 (4f) | - | - | - |
|
| El Ghorra, El Tarf. | Sheep (250) | 1 (1 m) | 1 (1 m) | - | - | - |
| Cheabat El Balout, Souk Ahras | Mongoose (1) | 1 (1 m) | 1 (1 m) | - | - | - | |
|
| El Ghorra, El Tarf. | Dogs (50) | 2 (2f) | 2 (2f) | - | - | - |
| Cheabat El Balout, Souk Ahras | Hedgehogs (4) | 9 (1 m, 8f) | 9 (1 m, 8f) | - | - | - | |
|
| Cheabat El Balout, Souk Ahras | Boars (2) | 3 (3f) | 3 (3f) | 2/3 (2f) | - | - |
|
| Cheabat El Balout, Souk Ahras | Boars (2) | 1 (1f) | 1 (1f) | 1/1 (1f) | - | - |
|
| Cheabat El Balout, Souk Ahras | Bats (10) | 19 (2f, 17 nymphs) | 19 (2f, 17 nymphs) | - | 12/19 (1f, 11 nymphs) | 3/19 (2f, 1 nymph) |
|
| Cheabat El Balout, Souk Ahras | Bats (10) | 3 (3f) | 3 (3f) | - | - | - |
|
| Cheabat El Balout, Souk Ahras | Hedgehogs (4) | 2 (2f) | 2 (2f) | 2/2 (2f) | - | - |
|
| Cheabat El Balout, Souk Ahras | Porcupine (1) | 21 (3 m, 18f) | 21 (3 m, 18f) | - | - | - |
|
| Cheabat El Balout, Souk Ahras | Bats (10) | 11(5 m, 6f) | 11(5 m, 6f) | - | 8/11 | - |
|
| Cheabat El Balout, Souk Ahras | Hedgehogs (4) | 110 (39 m, 71f) | 110 (39 m, 71f) | 80/110 (19 m, 61f) | - | - |