Literature DB >> 26787909

Programmable polyproteams built using twin peptide superglues.

Gianluca Veggiani1, Tomohiko Nakamura2, Michael D Brenner1, Raphaël V Gayet3, Jun Yan4, Carol V Robinson4, Mark Howarth5.   

Abstract

Programmed connection of amino acids or nucleotides into chains introduced a revolution in control of biological function. Reacting proteins together is more complex because of the number of reactive groups and delicate stability. Here we achieved sequence-programmed irreversible connection of protein units, forming polyprotein teams by sequential amidation and transamidation. SpyTag peptide is engineered to spontaneously form an isopeptide bond with SpyCatcher protein. By engineering the adhesin RrgA from Streptococcus pneumoniae, we developed the peptide SnoopTag, which formed a spontaneous isopeptide bond to its protein partner SnoopCatcher with >99% yield and no cross-reaction to SpyTag/SpyCatcher. Solid-phase attachment followed by sequential SpyTag or SnoopTag reaction between building-blocks enabled iterative extension. Linear, branched, and combinatorial polyproteins were synthesized, identifying optimal combinations of ligands against death receptors and growth factor receptors for cancer cell death signal activation. This simple and modular route to programmable "polyproteams" should enable exploration of a new area of biological space.

Entities:  

Keywords:  antibody; nanobiotechnology; protein engineering; split protein; synthetic biology

Mesh:

Substances:

Year:  2016        PMID: 26787909      PMCID: PMC4747704          DOI: 10.1073/pnas.1519214113

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  65 in total

Review 1.  Compatible and counteracting solutes: protecting cells from the Dead Sea to the deep sea.

Authors:  Paul H Yancey
Journal:  Sci Prog       Date:  2004       Impact factor: 2.774

Review 2.  Enzymatic labeling of proteins: techniques and approaches.

Authors:  Mohammad Rashidian; Jonathan K Dozier; Mark D Distefano
Journal:  Bioconjug Chem       Date:  2013-08-21       Impact factor: 4.774

Review 3.  Finding the right (bioorthogonal) chemistry.

Authors:  David M Patterson; Lidia A Nazarova; Jennifer A Prescher
Journal:  ACS Chem Biol       Date:  2014-01-30       Impact factor: 5.100

4.  Integration of bacterial lytic polysaccharide monooxygenases into designer cellulosomes promotes enhanced cellulose degradation.

Authors:  Yonathan Arfi; Melina Shamshoum; Ilana Rogachev; Yoav Peleg; Edward A Bayer
Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-09       Impact factor: 11.205

5.  Synthesis of bioactive protein hydrogels by genetically encoded SpyTag-SpyCatcher chemistry.

Authors:  Fei Sun; Wen-Bin Zhang; Alborz Mahdavi; Frances H Arnold; David A Tirrell
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-21       Impact factor: 11.205

6.  Structural basis for high-affinity HER2 receptor binding by an engineered protein.

Authors:  Charles Eigenbrot; Mark Ultsch; Anatoly Dubnovitsky; Lars Abrahmsén; Torleif Härd
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-09       Impact factor: 11.205

7.  Phage display selection of Affibody molecules with specific binding to the extracellular domain of the epidermal growth factor receptor.

Authors:  M Friedman; E Nordberg; I Höidén-Guthenberg; H Brismar; G P Adams; F Y Nilsson; J Carlsson; S Ståhl
Journal:  Protein Eng Des Sel       Date:  2007-04-23       Impact factor: 1.650

8.  Self-assembling cages from coiled-coil peptide modules.

Authors:  Jordan M Fletcher; Robert L Harniman; Frederick R H Barnes; Aimee L Boyle; Andrew Collins; Judith Mantell; Thomas H Sharp; Massimo Antognozzi; Paula J Booth; Noah Linden; Mervyn J Miles; Richard B Sessions; Paul Verkade; Derek N Woolfson
Journal:  Science       Date:  2013-04-11       Impact factor: 47.728

9.  SpyAvidin hubs enable precise and ultrastable orthogonal nanoassembly.

Authors:  Michael Fairhead; Gianluca Veggiani; Melissa Lever; Jun Yan; Dejan Mesner; Carol V Robinson; Omer Dushek; P Anton van der Merwe; Mark Howarth
Journal:  J Am Chem Soc       Date:  2014-08-21       Impact factor: 15.419

10.  Structural analysis and optimization of the covalent association between SpyCatcher and a peptide Tag.

Authors:  Long Li; Jacob O Fierer; Tom A Rapoport; Mark Howarth
Journal:  J Mol Biol       Date:  2013-10-23       Impact factor: 5.469

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  66 in total

1.  B12-dependent photoresponsive protein hydrogels for controlled stem cell/protein release.

Authors:  Ri Wang; Zhongguang Yang; Jiren Luo; I-Ming Hsing; Fei Sun
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-22       Impact factor: 11.205

2.  Molecular strategy for blocking isopeptide bond formation in nascent pilin proteins.

Authors:  Jaime Andrés Rivas-Pardo; Carmen L Badilla; Rafael Tapia-Rojo; Álvaro Alonso-Caballero; Julio M Fernández
Journal:  Proc Natl Acad Sci U S A       Date:  2018-08-27       Impact factor: 11.205

3.  Display of Recombinant Proteins on Bacterial Outer Membrane Vesicles by Using Protein Ligation.

Authors:  H Bart van den Berg van Saparoea; Diane Houben; Marien I de Jonge; Wouter S P Jong; Joen Luirink
Journal:  Appl Environ Microbiol       Date:  2018-04-02       Impact factor: 4.792

4.  Covalent Protein Labeling by SpyTag-SpyCatcher in Fixed Cells for Super-Resolution Microscopy.

Authors:  Veronica Pessino; Y Rose Citron; Siyu Feng; Bo Huang
Journal:  Chembiochem       Date:  2017-06-22       Impact factor: 3.164

5.  Controlled and Stable Patterning of Diverse Inorganic Nanocrystals on Crystalline Two-Dimensional Protein Arrays.

Authors:  Victor R Mann; Francesca Manea; Nicholas J Borys; Caroline M Ajo-Franklin; Bruce E Cohen
Journal:  Biochemistry       Date:  2021-03-10       Impact factor: 3.162

6.  Protein-Mediated Colloidal Assembly.

Authors:  Maiko Obana; Bradley R Silverman; David A Tirrell
Journal:  J Am Chem Soc       Date:  2017-09-27       Impact factor: 15.419

7.  Solid-Phase Synthesis of Megamolecules.

Authors:  Blaise R Kimmel; Justin A Modica; Kelly Parker; Vinayak Dravid; Milan Mrksich
Journal:  J Am Chem Soc       Date:  2020-03-03       Impact factor: 15.419

8.  A new method for post-translationally labeling proteins in live cells for fluorescence imaging and tracking.

Authors:  M Hinrichsen; M Lenz; J M Edwards; O K Miller; S G J Mochrie; P S Swain; U Schwarz-Linek; L Regan
Journal:  Protein Eng Des Sel       Date:  2017-12-01       Impact factor: 1.650

Review 9.  Approaches for peptide and protein cyclisation.

Authors:  Heather C Hayes; Louis Y P Luk; Yu-Hsuan Tsai
Journal:  Org Biomol Chem       Date:  2021-05-12       Impact factor: 3.876

10.  Dynamically tunable light responsive silk-elastin-like proteins.

Authors:  Om Prakash Narayan; Xuan Mu; Onur Hasturk; David L Kaplan
Journal:  Acta Biomater       Date:  2020-12-14       Impact factor: 8.947

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