Literature DB >> 26787742

Cellular structural biology as revealed by cryo-electron tomography.

Rossitza N Irobalieva1, Bruno Martins1, Ohad Medalia2.   

Abstract

Understanding the function of cellular machines requires a thorough analysis of the structural elements that underline their function. Electron microscopy (EM) has been pivotal in providing information about cellular ultrastructure, as well as macromolecular organization. Biological materials can be physically fixed by vitrification and imaged with cryo-electron tomography (cryo-ET) in a close-to-native condition. Using this technique, one can acquire three-dimensional (3D) information about the macromolecular architecture of cells, depict unique cellular states and reconstruct molecular networks. Technical advances over the last few years, such as improved sample preparation and electron detection methods, have been instrumental in obtaining data with unprecedented structural details. This presents an exciting opportunity to explore the molecular architecture of both individual cells and multicellular organisms at nanometer to subnanometer resolution. In this Commentary, we focus on the recent developments and in situ applications of cryo-ET to cell and structural biology.
© 2016. Published by The Company of Biologists Ltd.

Keywords:  Cryo-electron tomography; In situ structural determination; Macromolecular assemblies

Mesh:

Year:  2016        PMID: 26787742     DOI: 10.1242/jcs.171967

Source DB:  PubMed          Journal:  J Cell Sci        ISSN: 0021-9533            Impact factor:   5.285


  18 in total

1.  Revealing the architecture of protein complexes by an orthogonal approach combining HDXMS, CXMS, and disulfide trapping.

Authors:  Kunhong Xiao; Yang Zhao; Minjung Choi; Hongda Liu; Adi Blanc; Jiang Qian; Thomas J Cahill; Xue Li; Yunfang Xiao; Lisa J Clark; Sheng Li
Journal:  Nat Protoc       Date:  2018-05-24       Impact factor: 13.491

Review 2.  Toward correlating structure and mechanics of platelets.

Authors:  Simona Sorrentino; Jan-Dirk Studt; Melanie Bokstad Horev; Ohad Medalia; K Tanuj Sapra
Journal:  Cell Adh Migr       Date:  2016-04-22       Impact factor: 3.405

Review 3.  Use of electron microscopy to study platelets and thrombi.

Authors:  Maurizio Tomaiuolo; Rustem I Litvinov; John W Weisel; Timothy J Stalker
Journal:  Platelets       Date:  2020-05-18       Impact factor: 3.862

Review 4.  A new look at the heart-novel imaging techniques.

Authors:  C M Johnston; A J Krafft; M F Russe; E A Rog-Zielinska
Journal:  Herzschrittmacherther Elektrophysiol       Date:  2017-12-14

5.  Correction of Missing-Wedge Artifacts in Filamentous Tomograms by Template-Based Constrained Deconvolution.

Authors:  Julio Kovacs; Junha Song; Manfred Auer; Jing He; Wade Hunter; Willy Wriggers
Journal:  J Chem Inf Model       Date:  2020-03-19       Impact factor: 4.956

6.  Structure Detection in Three-Dimensional Cellular Cryoelectron Tomograms by Reconstructing Two-Dimensional Annotated Tilt Series.

Authors:  Xiangrui Zeng; Ziqian Lin; Mostofa Rafid Uddin; Bo Zhou; Chao Cheng; Jing Zhang; Zachary Freyberg; Min Xu
Journal:  J Comput Biol       Date:  2022-07-21       Impact factor: 1.549

7.  New hardware and workflows for semi-automated correlative cryo-fluorescence and cryo-electron microscopy/tomography.

Authors:  Martin Schorb; Leander Gaechter; Ori Avinoam; Frank Sieckmann; Mairi Clarke; Cecilia Bebeacua; Yury S Bykov; Andreas F-P Sonnen; Reinhard Lihl; John A G Briggs
Journal:  J Struct Biol       Date:  2016-06-28       Impact factor: 2.867

8.  Exploring an optimal wavelet-based filter for cryo-ET imaging.

Authors:  Xinrui Huang; Sha Li; Song Gao
Journal:  Sci Rep       Date:  2018-02-07       Impact factor: 4.379

9.  Tracing Actin Filament Bundles in Three-Dimensional Electron Tomography Density Maps of Hair Cell Stereocilia.

Authors:  Salim Sazzed; Junha Song; Julio A Kovacs; Willy Wriggers; Manfred Auer; Jing He
Journal:  Molecules       Date:  2018-04-11       Impact factor: 4.411

Review 10.  Towards correlative super-resolution fluorescence and electron cryo-microscopy.

Authors:  Georg Wolff; Christoph Hagen; Kay Grünewald; Rainer Kaufmann
Journal:  Biol Cell       Date:  2016-06-22       Impact factor: 4.458

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