Literature DB >> 26784989

Complete genome sequence of cyanobacterium Fischerella sp. NIES-3754, providing thermoresistant optogenetic tools.

Yuu Hirose1, Takatomo Fujisawa2, Yoshiyuki Ohtsubo3, Mitsunori Katayama4, Naomi Misawa5, Sachiko Wakazuki6, Yohei Shimura7, Yasukazu Nakamura2, Masanobu Kawachi7, Hirofumi Yoshikawa8, Toshihiko Eki5, Yu Kanesaki9.   

Abstract

Cyanobacterial phytochrome-class photosensors are recently emerging optogenetic tools. We isolated Fischerella sp. strain NIES-3754 from hotspring at Suwa-shrine, Suwa, Nagano, Japan. We determined complete genome sequence of the NIES-3754 strain, which is composed of one chromosome and two putative replicons (total 5,826,863bp containing no gaps). We identified photosensor genes of 5 phytochromes and 9 cyanobacteriochromes, which will facilitate optogenetics of thermophile.
Copyright © 2016 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Cyanobacteria; Genome; Photosensor; Thermophile

Mesh：

Substances：

Year:  2016        PMID： 26784989     DOI： 10.1016/j.jbiotec.2016.01.011

Source DB:  PubMed          Journal:  J Biotechnol        ISSN： 0168-1656            Impact factor:   3.307


  8 in total

1.  Protochromic absorption changes in the two-cysteine photocycle of a blue/orange cyanobacteriochrome.

Authors:  Teppei Sato; Takashi Kikukawa; Risako Miyoshi; Kousuke Kajimoto; Chinatsu Yonekawa; Tomotsumi Fujisawa; Masashi Unno; Toshihiko Eki; Yuu Hirose
Journal:  J Biol Chem       Date:  2019-10-24       Impact factor: 5.157

Review 2.  Genomic attributes of thermophilic and hyperthermophilic bacteria and archaea.

Authors:  Digvijay Verma; Vinay Kumar; Tulasi Satyanarayana
Journal:  World J Microbiol Biotechnol       Date:  2022-06-13       Impact factor: 3.312

3.  Genome Analysis Coupled With Transcriptomics Reveals the Reduced Fitness of a Hot Spring Cyanobacterium Mastigocladus laminosus UU774 Under Exogenous Nitrogen Supplement.

Authors:  Mayuri Mukherjee; Aribam Geeta; Samrat Ghosh; Asharani Prusty; Subhajeet Dutta; Aditya Narayan Sarangi; Smrutisanjita Behera; Siba Prasad Adhikary; Sucheta Tripathy
Journal:  Front Microbiol       Date:  2022-07-01       Impact factor: 6.064

4.  Complete Genome Sequence of Cyanobacterium Leptolyngbya sp. NIES-3755.

Authors:  Yuu Hirose; Takatomo Fujisawa; Yoshiyuki Ohtsubo; Mitsunori Katayama; Naomi Misawa; Sachiko Wakazuki; Yohei Shimura; Yasukazu Nakamura; Masanobu Kawachi; Hirofumi Yoshikawa; Toshihiko Eki; Yu Kanesaki
Journal:  Genome Announc       Date:  2016-03-17

5.  Draft Genome Sequence of the Nitrogen-Fixing and Hormogonia-Inducing Cyanobacterium Nostoc cycadae Strain WK-1, Isolated from the Coralloid Roots of Cycas revoluta.

Authors:  Yu Kanesaki; Masaki Hirose; Yuu Hirose; Takatomo Fujisawa; Yasukazu Nakamura; Satoru Watanabe; Shigeru Matsunaga; Hiroko Uchida; Akio Murakami
Journal:  Genome Announc       Date:  2018-02-15

6.  Genome sequencing of the NIES Cyanobacteria collection with a focus on the heterocyst-forming clade.

Authors:  Yuu Hirose; Yoshiyuki Ohtsubo; Naomi Misawa; Chinatsu Yonekawa; Nobuyoshi Nagao; Yohei Shimura; Takatomo Fujisawa; Yu Kanesaki; Hiroshi Katoh; Mitsunori Katayama; Haruyo Yamaguchi; Hirofumi Yoshikawa; Masahiko Ikeuchi; Toshihiko Eki; Yasukazu Nakamura; Masanobu Kawachi
Journal:  DNA Res       Date:  2021-10-11       Impact factor: 4.458

7.  Complete Genome Sequence of a Thin-Sheath Mutant of the Phototropic Cyanobacterium Calothrix sp. Strain PCC 7716.

Authors:  Yuu Hirose; Mitsunori Katayama
Journal:  Microbiol Resour Announc       Date:  2021-12-02

8.  Comprehensive Analyses of Cytochrome P450 Monooxygenases and Secondary Metabolite Biosynthetic Gene Clusters in Cyanobacteria.

Authors:  Makhosazana Jabulile Khumalo; Nomfundo Nzuza; Tiara Padayachee; Wanping Chen; Jae-Hyuk Yu; David R Nelson; Khajamohiddin Syed
Journal:  Int J Mol Sci       Date:  2020-01-19       Impact factor: 5.923
  8 in total

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