Literature DB >> 26770338

The CDKN2A-CDKN2B rs4977756 polymorphism and glioma risk: a meta-analysis.

Hongwei Lu1, Yuantao Yang1, Jihui Wang1, Yang Liu1, Ming Huang1, Xinlin Sun1, Yiquan Ke1.   

Abstract

The association between the rs4977756 single nucleotide polymorphism (SNP) and glioma risk has been studied, but these studies have yielded conflicting results. In order to explore this association, we performed a meta-analysis. A comprehensive literature search was performed using PubMed and EMBASE database. Six articles including 12 case-control studies in English with 12022 controls and 6871 cases were eligible for the meta-analysis. Subgroup analyses were conducted by ethnicity and source of controls. Our meta-analysis found that rs4977756 polymorphism was associated with glioma risks in homozygote, heterozygote, dominant, recessive and additive genetic models (GG versus AA: OR=1.55, 95% CI=1.42-1.69, Ph=0.996, I(2)=0.0%; AG versus AA: OR=1.20, 95% CI=1.12-1.28, Ph=0.934, I(2)=0.0%; recessive model: OR=1.39, 95% CI=1.28-1.50, Ph=0.995, I(2)=0.0%; dominant model: OR=1.29, 95% CI=1.21-1.37, Ph=0.923, I(2)=0.0%; additive model: OR=1.24, 95% CI=1.19-1.30, Ph=0.966, I(2)=0.0%). Moreover, our results suggested that CDKN2A-CDKN2B rs4977756 polymorphism was associated with a notable increased risk of glioma in Europeans. However, in Asians, we could not come to a conclusion because of lack of studies. Sensitivity analysis showed the omission of any study made no significant difference. No evidence of publication bias was produced. Our meta-analysis suggested that rs4977756 polymorphism was associated with increased risk of glioma. Moreover, additional studies should be further investigated to draw a more accurate conclusion.

Entities:  

Keywords:  CDKN2A-CDKN2B; Glioma; meta-analysis; polymorphism; rs4977756

Year:  2015        PMID: 26770338      PMCID: PMC4694238     

Source DB:  PubMed          Journal:  Int J Clin Exp Med        ISSN: 1940-5901


  24 in total

1.  Joint associations between genetic variants and reproductive factors in glioma risk among women.

Authors:  Sophia S Wang; Patricia Hartge; Meredith Yeager; Tania Carreón; Avima M Ruder; Martha Linet; Peter D Inskip; Amanda Black; Ann W Hsing; Michael Alavanja; Laura Beane-Freeman; Mahboobeh Safaiean; Stephen J Chanock; Preetha Rajaraman
Journal:  Am J Epidemiol       Date:  2011-09-13       Impact factor: 4.897

2.  Regulator of telomere elongation helicase 1 (RTEL1) rs6010620 polymorphism contribute to increased risk of glioma.

Authors:  Wei Zhao; Yusong Bian; Wei Zhu; Peng Zou; Guotai Tang
Journal:  Tumour Biol       Date:  2014-02-13

Review 3.  The PHLDB1 rs498872 (11q23.3) polymorphism and glioma risk: A meta-analysis.

Authors:  Xingchun Gao; Yajing Mi; Aili Yan; Baoyong Sha; Na Guo; Zhifang Hu; Ni Zhang; Fengliang Jiang; Xingchun Gou
Journal:  Asia Pac J Clin Oncol       Date:  2014-06-17       Impact factor: 2.601

4.  Meta-analysis in clinical trials.

Authors:  R DerSimonian; N Laird
Journal:  Control Clin Trials       Date:  1986-09

5.  Role of p16 and p14ARF in radio- and chemosensitivity of malignant gliomas.

Authors:  Matthias Simon; David Voss; Tjoung-Won Park-Simon; Ralph Mahlberg; Gertraud Köster
Journal:  Oncol Rep       Date:  2006-07       Impact factor: 3.906

6.  Joint effects between five identified risk variants, allergy, and autoimmune conditions on glioma risk.

Authors:  Mahboobeh Safaeian; Preetha Rajaraman; Patricia Hartge; Meredith Yeager; Martha Linet; Mary Ann Butler; Avima M Ruder; Mark P Purdue; Ann Hsing; Laura Beane-Freeman; Jane A Hoppin; Demetrius Albanes; Stephanie J Weinstein; Peter D Inskip; Alina Brenner; Nathaniel Rothman; Nilanjan Chatterjee; Elizabeth M Gillanders; Stephen J Chanock; Sophia S Wang
Journal:  Cancer Causes Control       Date:  2013-08-01       Impact factor: 2.506

7.  Genome-wide association study identifies five susceptibility loci for glioma.

Authors:  Sanjay Shete; Fay J Hosking; Lindsay B Robertson; Sara E Dobbins; Marc Sanson; Beatrice Malmer; Matthias Simon; Yannick Marie; Blandine Boisselier; Jean-Yves Delattre; Khe Hoang-Xuan; Soufiane El Hallani; Ahmed Idbaih; Diana Zelenika; Ulrika Andersson; Roger Henriksson; A Tommy Bergenheim; Maria Feychting; Stefan Lönn; Anders Ahlbom; Johannes Schramm; Michael Linnebank; Kari Hemminki; Rajiv Kumar; Sarah J Hepworth; Amy Price; Georgina Armstrong; Yanhong Liu; Xiangjun Gu; Robert Yu; Ching Lau; Minouk Schoemaker; Kenneth Muir; Anthony Swerdlow; Mark Lathrop; Melissa Bondy; Richard S Houlston
Journal:  Nat Genet       Date:  2009-07-05       Impact factor: 38.330

Review 8.  Epidemiology of brain tumors.

Authors:  Hiroko Ohgaki
Journal:  Methods Mol Biol       Date:  2009

9.  Variants in the CDKN2B and RTEL1 regions are associated with high-grade glioma susceptibility.

Authors:  Margaret Wrensch; Robert B Jenkins; Jeffrey S Chang; Ru-Fang Yeh; Yuanyuan Xiao; Paul A Decker; Karla V Ballman; Mitchel Berger; Jan C Buckner; Susan Chang; Caterina Giannini; Chandralekha Halder; Thomas M Kollmeyer; Matthew L Kosel; Daniel H LaChance; Lucie McCoy; Brian P O'Neill; Joe Patoka; Alexander R Pico; Michael Prados; Charles Quesenberry; Terri Rice; Amanda L Rynearson; Ivan Smirnov; Tarik Tihan; Joe Wiemels; Ping Yang; John K Wiencke
Journal:  Nat Genet       Date:  2009-07-05       Impact factor: 38.330

10.  Association between the XRCC1 polymorphisms and glioma risk: a meta-analysis of case-control studies.

Authors:  Lei Jiang; Xiao Fang; Yi Bao; Jue-Yu Zhou; Xiao-Yan Shen; Mao-Hua Ding; Yi Chen; Guo-Han Hu; Yi-Cheng Lu
Journal:  PLoS One       Date:  2013-01-30       Impact factor: 3.240

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  5 in total

1.  Replication of GWAS identifies RTEL1, CDKN2A/B, and PHLDB1 SNPs as risk factors in Portuguese gliomas patients.

Authors:  Marta Viana-Pereira; Daniel Antunes Moreno; Paulo Linhares; Júlia Amorim; Rui Nabiço; Sandra Costa; Rui Vaz; Rui Manuel Reis
Journal:  Mol Biol Rep       Date:  2019-11-12       Impact factor: 2.316

2.  Asian-specific 3'UTR variant in CDKN2B associated with risk of pituitary adenoma.

Authors:  Byeong Ju Youn; Hyun Sub Cheong; Suhg Namgoong; Lyoung Hyo Kim; In Ki Baek; Jeong-Hyun Kim; Seon-Jin Yoon; Eui Hyun Kim; Se Hoon Kim; Jong Hee Chang; Sun Ho Kim; Hyoung Doo Shin
Journal:  Mol Biol Rep       Date:  2022-09-12       Impact factor: 2.742

Review 3.  An Unanticipated Modulation of Cyclin-Dependent Kinase Inhibitors: The Role of Long Non-Coding RNAs.

Authors:  Debora Bencivenga; Emanuela Stampone; Angela Vastante; Myassar Barahmeh; Fulvio Della Ragione; Adriana Borriello
Journal:  Cells       Date:  2022-04-14       Impact factor: 7.666

4.  Genetic association between CDKN2B-AS1 polymorphisms and the susceptibility of primary open-angle glaucoma (POAG): a meta-analysis from 21,775 subjects.

Authors:  Shanshan Liu; Siwen Chen; Tongtong Niu
Journal:  Ir J Med Sci       Date:  2021-10-14       Impact factor: 2.089

5.  Two gene polymorphisms (rs4977756 and rs11515) in CDKN2A/B and glioma risk in South Indian population.

Authors:  M K Sibin; I Bhat Dhananjaya; K V L Narasingarao; S M Harshitha; M Jeru-Manoj; G K Chetan
Journal:  Meta Gene       Date:  2016-07-17
  5 in total

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