| Literature DB >> 26767946 |
Orlando Fernandes1, Liana C L Portugal2, Rita de Cássia S Alves2, Tiago Arruda-Sanchez3, Anil Rao4, Eliane Volchan5, Mirtes Pereira2, Letícia Oliveira2, Janaina Mourao-Miranda6.
Abstract
INTRODUCTION: Pattern recognition analysis (PRA) applied to functional magnetic resonance imaging (fMRI) has been used to decode cognitive processes and identify possible biomarkers for mental illness. In the present study, we investigated whether the positive affect (PA) or negative affect (NA) personality traits could be decoded from patterns of brain activation in response to a human threat using a healthy sample.Entities:
Keywords: Decode; Functional magnetic resonance imaging; Multi-kernel learning; Negative affect trait; Pattern recognition analyses; Threat stimuli
Mesh:
Year: 2016 PMID: 26767946 PMCID: PMC5193176 DOI: 10.1016/j.neuroimage.2015.12.050
Source DB: PubMed Journal: Neuroimage ISSN: 1053-8119 Impact factor: 6.556
Mean values for pleasure, arousal, complexity ratings and physical features for each experimental condition.
| Valence | Arousal | Complexity | Brightness | Contrast | Spatial frequency | |
|---|---|---|---|---|---|---|
| Directed toward threat | 2.06 (1.22) | 6.56 (2.20) | 3.00 (0.74) | 76.47 (23.75) | 25.43 (9.73) | 0.96 (0.10) |
| Directed toward neutral | 5.20 (0.99) | 3.65 (2.02) | 2.92 (0.57) | 79.33 (24.98) | 27.67 (8.78) | 0.99 (0.14) |
| Directed away threat | 2.73 (1.37) | 5.50 (2.16) | 2.59 (0.77) | 92.84 (36.86) | 20.95 (10.57) | 0.99 (0.06) |
| Directed away neutral | 5.47 (1.01) | 3.63 (1.99) | 3.02 (1.04) | 87.07 (37.10) | 21.42 (7.37) | 1.02 (0.11) |
Note: Standard deviations are within parentheses. Brightness, contrast and spatial frequency were measure according to Bradley et al. (2007). The picture complexity was evaluated using a separate group of 58 participants (42 female, 20.5 years ± 1.88) on a scale of 1–9 in terms of figure-ground and complex scenes. Brightness was defined as the mean RGB (Red, Green and Blue) value for each pixel, averaged across all pixels for the pictures. Contrast was defined as the standard deviation of the mean RGB values computed across pixels for each column. Spatial frequency was defined as the median FFT (Fast Fourier Transform) power, which was computed for each row and column, and then averaged.
Fig. 1Multiple kernel learning frameworks. Superior panel: (A) The multiple kernel learning (MKL) regression model is trained by providing examples that pair a contrast image from the GLM model and a personality trait score. (B) The MKL framework uses a predefined anatomical template to segment the contrast images into 116 anatomical brain regions. (C) A linear kernel is computed for each brain region. (D) The MKL simultaneously learns and combines different models represented by different kernels or decision functions, i.e., the model learns the contribution of each region to the decision function (kernel weights), and within each region, the contribution of each voxel (voxel weights). Inferior Panel: (E) during the test phase, given the contrast image of a test subject the MKL model predicts the personality score. (F) The model performance is evaluated using 2 metrics to measure the agreement between the predicted and the actual negative affect scores, that is, Pearson's correlation coefficient (r) and the mean squared error (MSE). (Single column fitting image).
Mean NA scores for all subjects and separated for men and women.
| All subjects | Men | Women | |
|---|---|---|---|
| Positive affect | 32.09 (5.12) | 31.53 (5.23) | 32.8 (5.06) |
| Negative affect | 20.15 (5.86) | 21.37 (6.58) | 18.6 (4.55) |
Note: Standard deviations are within parentheses.
Performance model shown using correlation (r) and MSE between the real and predicted PA and NA scores for each threat context.
| r | p-Value | MSE | p-Value | ||
|---|---|---|---|---|---|
| Positive affect | Directed toward context | − 0.32 | 0.63 | 30.94 | 0.82 |
| Directed away context | − 0.23 | 0.42 | 29.67 | 0.73 | |
| Negative affect | Directed toward context | − 0.33 | 0.46 | 39.59 | 0.43 |
| Directed away context | 0.52 | 0.01 | 24.43 | 0.01 |
Note: The p-value was obtained using a permutation test (100 permutations).
Fig. 2Multiple kernel learning (MKL) results. (A) Scatter plot between the real and predicted NA scores for the model based on patterns of brain activation to threat stimuli in the directed away context. The correlation and the MSE between the real and predicted NA scores were r = 0.52 (p-value = 0.01) and MSE = 24.43 (p-value = 0.01). (B) Weights per voxel in a whole brain fashion, the color bar represents the full range of the weights. The images show the coronal, sagittal and axial slices (MNI coordinates). (C) Top 6 regions ranked by the MKL model that were relevant to the prediction. The percentage of weight of each region are in parentheses. The colors represent the weights per voxel within each region, including the right middle occipital gyrus, right middle temporal gyrus, right caudate nucleus, right inferior frontal gyrus (orbital part), right medial frontal gyrus and left insula. (2-column fitting image).
Brain regions ranked according to their importance to the decision function for the model trained to predict NA scores from patterns of brain activation in response to threat stimuli directed away from the viewer.
| Rank | Region label | Region weight (%) | Region size (voxel) |
|---|---|---|---|
| 1 | Occipital_Mid_R | 36.75 | 1639 |
| 2 | Temporal_Mid_R | 15.41 | 3264 |
| 3 | Caudate_R | 9.38 | 953 |
| 4 | Frontal_Inf_Orb_R | 7.71 | 870 |
| 5 | Frontal_Sup_Medial_R | 7.60 | 1416 |
| 6 | Insula_L | 5.53 | 1866 |
| 7 | Putamen_R | 3.74 | 1062 |
| 8 | Occipital_Inf_R | 2.87 | 785 |
| 9 | Cerebelum_Crus1_R | 2.13 | 124 |
| 10 | Rectus_L | 1.99 | 101 |
| 11 | Hippocampus_R | 1.25 | 800 |
| 12 | Parietal_Sup_L | 1.12 | 1037 |
| 13 | Olfactory_L | 0.94 | 120 |
| 14 | Temporal_Inf_R | 0.75 | 1100 |
| 15 | Vermis_1_2 | 0.50 | 47 |
| 16 | Cerebelum_Crus2_L | 0.35 | 3 |
| 17 | ParaHippocampal_R | 0.34 | 436 |
| 18 | Frontal_Mid_Orb_L | 0.28 | 333 |
| 19 | Frontal_Mid_L | 0.27 | 3236 |
| 20 | Paracentral_Lobule_L | 0.17 | 655 |
| 21 | Calcarine_L | 0.13 | 2062 |
| 22 | Frontal_Inf_Oper_R | 0.13 | 1200 |
| 23 | Occipital_Mid_L | 0.10 | 2850 |
| 24 | Occipital_Sup_R | 0.09 | 1079 |
| 25 | Temporal_Pole_Mid_R | 0.09 | 36 |
| 26 | Parietal_Sup_R | 0.08 | 736 |
| 27 | Frontal_Inf_Tri_L | 0.08 | 1969 |
| 28 | Pallidum_L | 0.07 | 270 |
| 29 | SupraMarginal_R | 0.04 | 1598 |
| 30 | Frontal_Mid_Orb_L | 0.04 | 406 |
| 31 | Thalamus_R | 0.02 | 1025 |
| 32 | Supp_Motor_Area_R | 0.02 | 1871 |
| 33 | Cerebelum_4_5_R | 0.02 | 562 |
| 34 | Thalamus_L | 0.01 | 1056 |
| 35 | ParaHippocampal_L | 0.00 | 370 |
| 36 | Frontal_Mid_Orb_R | 0.00 | 556 |
| 37 | Cerebelum_6_L | 0.00 | 1058 |