Literature DB >> 26763787

Alternative Splicing in CKD.

Megan Stevens1, Sebastian Oltean2.   

Abstract

Alternative splicing (AS) has emerged in the postgenomic era as one of the main drivers of proteome diversity, with ≥94% of multiexon genes alternatively spliced in humans. AS is therefore one of the main control mechanisms for cell phenotype, and is a process deregulated in disease. Numerous reports describe pathogenic mutations in splice factors, splice sites, or regulatory sequences. Additionally, compared with the physiologic state, disease often associates with an abnormal proportion of splice isoforms (or novel isoforms), without an apparent driver mutation. It is therefore essential to study how AS is regulated in physiology, how it contributes to pathogenesis, and whether we can manipulate faulty splicing for therapeutic advantage. Although the disease most commonly linked to deregulation of AS in several genes is cancer, many reports detail pathogenic splice variants in diseases ranging from neuromuscular disorders to diabetes or cardiomyopathies. A plethora of splice variants have been implicated in CKDs as well. In this review, we describe examples of these CKD-associated splice variants and ideas on how to manipulate them for therapeutic benefit.
Copyright © 2016 by the American Society of Nephrology.

Entities:  

Keywords:  chronic kidney disease; gene expression; mRNA

Mesh:

Substances:

Year:  2016        PMID: 26763787      PMCID: PMC4884122          DOI: 10.1681/ASN.2015080908

Source DB:  PubMed          Journal:  J Am Soc Nephrol        ISSN: 1046-6673            Impact factor:   10.121


  68 in total

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Review 2.  Spliceosome structure and function.

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Review 6.  Regulation of splicing by SR proteins and SR protein-specific kinases.

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7.  Vascular permeability factor mRNA and protein expression in human kidney.

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5.  Single well, single-common primer pair, dual probe, duplex qPCR assay for the quantification of mRNA splicing variants.

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6.  A drug-repositioning screen using splicing-sensitive fluorescent reporters identifies novel modulators of VEGF-A splicing with anti-angiogenic properties.

Authors:  Eleanor Star; Megan Stevens; Clare Gooding; Christopher W J Smith; Ling Li; Monica Lamici Ayine; Steve J Harper; David O Bates; Sebastian Oltean
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7.  Vascular Endothelial Growth Factor-A165b Restores Normal Glomerular Water Permeability in a Diphtheria-Toxin Mouse Model of Glomerular Injury.

Authors:  Megan Stevens; Christopher R Neal; Andrew H J Salmon; David O Bates; Steven J Harper; Sebastian Oltean
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8.  Identification of inflammatory response and alternative splicing in acute kidney injury and experimental verification of the involvement of RNA‑binding protein RBFOX1 in this disease.

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  8 in total

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