| Literature DB >> 26761501 |
Dong-Hyeon Kim1, Jung-Whan Chon1, Hyunsook Kim1, Hong-Seok Kim1, Dasom Choi1, Young-Ji Kim1, Jin-Hyeok Yim1, Jin-San Moon2, Kun-Ho Seo1.
Abstract
We compared standard culture methods as well as conventional PCR and real-time PCR for the detection of Listeria monocytogenes (L. monocytogenes) in milk, cheese, fresh-cut vegetables, and raw beef that have different levels of background microflora. No statistical differences were observed in sensitivity between the two selective media in all foods. In total, real-time PCR assay exhibited statistically excellent detection sensitivity (p<0.05) and was less time consuming and laborious as compared with standard culture methods. Conventional culture methods showed poor performance in detecting L. monocytogenes in food with high levels of background microflora, generating numerous false negative results. While the detection of L. monocytogenes in fresh cut vegetable by culture methods was hindered only by L. innocua, various background microflora, such as L. innocua, L. welshimeri, L. grayi, and Enterococcus faecalis appeared on the two selective media as presumptive positive colonies in raw beef indicating the necessity of improvement of current selective media. It appears that real-time PCR is an effective and sensitive presumptive screening tool for L. monocytogenes in various types of foods, especially foods samples with high levels of background microflora, thus complementing standard culture methodologies.Entities:
Keywords: Listeria monocytogenes; conventional PCR; culture method; profiling of false-positive colonies; real-time PCR
Year: 2014 PMID: 26761501 PMCID: PMC4662229 DOI: 10.5851/kosfa.2014.34.5.665
Source DB: PubMed Journal: Korean J Food Sci Anim Resour ISSN: 1225-8563 Impact factor: 2.622
Bacterial strains used in sensitivity and specificity tests
| Non- | |
|---|---|
| Poly O Type 4 isolated from brie cheese | |
| Serovar 4b isolated from clinical sample | |
| Poly O Type 1 isolated from ground veal | |
| Poly O Type 1 isolated from flounder | |
| Poly O Type 1 isolated from hamburger | |
| Poly O Type 1 isolated from sausage | |
| Poly O Type 1 isolated from monkfish | |
| Poly O Type 4 isolated from bovine tissue | |
| ATCC 517761,3) | |
| ScottA | |
| FSL-C1-109 | |
| 299056-A | |
| TS29/F2365 | |
| FSL-C1-122 | |
| 457778-1A | |
| FSL-J1-177 | |
| FSL-C1-056 | |
| CU-BR 1/93 | |
| FSL-M1-004 | |
| 908260 | |
| n=20 | n=42 |
1) Obtained from American Type Culture Collection (ATCC).
2) Obtained from Centers for Disease Control and Prevention (CDC).
3) This strain was used in experimental inoculation testing.
Strains with no superscripts were obtained from the Food and Drug Administration.
Comparison of sensitivity (inclusivity) and specificity (exclusivity) of selective media and PCR methods using pure cultures of Listeria monocytogenes and non- L. monocytogenes strains
| Strain | No. of positive strains / total No. of strains tested (%) | ||||
|---|---|---|---|---|---|
| Culture method | Conventional PCR | Real-time PCR | |||
| Oxford agar | PALCAM agar | ||||
| 20/20 (100)a | 20/20 (100)a | 20/20 (100)a | 20/20 (100)a | ||
| 6/6 (100) | 6/6 (100) | 0/6 (0) | 0/6 (0) | ||
| 6/6 (100) | 6/6 (100) | 0/6 (0) | 0/6 (0) | ||
| 0/5 (0) | 0/5 (0) | 0/5 (0) | 0/5 (0) | ||
| 0/5 (0) | 0/5 (0) | 0/5 (0) | 0/5 (0) | ||
| 3/5 (60) | 3/5 (60) | 0/5 (0) | 0/5 (0) | ||
| 0/5 (0) | 0/5 (0) | 0/5 (0) | 0/5 (0) | ||
| 0/5 (0) | 0/5 (0) | 0/5 (0) | 0/5 (0) | ||
| 0/1 (0) | 0/1 (0) | 0/1 (0) | 0/1 (0) | ||
| 0/1 (0) | 0/1 (0) | 0/1 (0) | 0/1 (0) | ||
| 0/1 (0) | 0/1 (0) | 0/1 (0) | 0/1 (0) | ||
| 0/1 (0) | 0/1 (0) | 0/1 (0) | 0/1 (0) | ||
| 0/1 (0) | 0/1 (0) | 0/1 (0) | 0/1 (0) | ||
| Non-LM Total2,3) | 15/42 (35.7)c | 15/42 (35.7)c | 0/42 (0)d | 0/42 (0)d | |
1)Different letters (a, b) within a row indicate a significant difference (p<0.05) in sensitivity.
2)Different letters (c, d) within a row indicate a significant difference (p<0.05) in specificity.
3)Total number of non-L. monocytogenes strains.
PALCAM, polymyxin-acriflavine-LiCl-ceftazidime-aesculin-mannitol; PCR, polymerase chain reaction.
Detection limits of Listeria monocytogenes ATCC 51776 with conventional and real-time PCR assays in pure culture and experimentally inoculated food samples without enrichment
| Number of cells (CFU/mL) | Pure culture | Food samples | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| PBS | Milk | Cheese | Vegetable salad | Raw beef | ||||||
| PCR | Real-time PCR | PCR | Real-time PCR | PCR | Real-time PCR | PCR | Real-time PCR | PCR | Real-time PCR | |
| 7.2×107 | + | + | + | + | + | + | + | + | + | + |
| 7.2×106 | + | + | + | + | + | + | + | + | + | + |
| 7.2×105 | + | + | + | + | + | + | + | + | + | + |
| 7.2×104 | + | + | + | + | + | + | + | + | + | + |
| 7.2×103 | + | + | − | − | − | − | − | − | − | − |
| 7.2×102 | − | + | − | − | − | − | − | − | − | − |
| 7.2×101 | − | − | − | − | − | − | − | − | − | − |
| 7.2×100 | − | − | − | − | − | − | − | − | − | − |
ATCC, American Type Culture Collection; CFU, colony-forming units; PBS, phosphate-buffered saline; PCR, polymerase chain reaction.
Identification of presumptively positive colonies on selective media using the Vitek 2 system
| Food samples | No. of background microflora1) | No. of presumptively positive plates / total No. of samples tested | No. of plates confirmed by Vitek 2 system / No. of presumptively positive plates (%) | ||||
|---|---|---|---|---|---|---|---|
| Milk | < 2 | 29/40 | 29/29 (100) | 0/29 (0) | 0/29 (0) | 0/29 (0) | 0/29 (0) |
| Cheese | < 2 | 26/40 | 26/26 (100) | 0/26 (0) | 0/26 (0) | 0/26 (0) | 0/26 (0) |
| Vegetable salad | 6.81±0.28 | 40/40 | 15/40 (37.5) | 25/40 (62.5) | 0/40 (0) | 0/40 (0) | 0/40 (0) |
| Raw beef | 4.00±0.17 | 40/40 | 23 or 242) /40 (57.5) | 8/40 (20) | 4/40(10) | 1/40 (2.5) | 4 or 33)/40 (10) |
1)log colony-forming units (CFU)/g.
2)23 on Oxford agar and 24 on polymyxin-acriflavine-LiCl-ceftazidime-aesculin-mannitol (PALCAM) agar.
3)4 on Oxford agar and 3 on PALCAM agar.
Comparison of culture methods, conventional PCR, and real-time PCR for the detection of Listeria monocytogenes in artificially inoculated food samples
| Food samples | Trial No. | Inoculum (CFU/500g of sample) | No. of positive samples / No. of samples tested (%) | |||
|---|---|---|---|---|---|---|
| Culture method | Conventional PCR | Real-time PCR | ||||
| Oxford agar | PALCAM agar | |||||
| Milk | 1 | 43 | 11/20 (55) | 11/20 (55) | 11/20 (55) | 12/20 (60) |
| 2 | 107 | 18/20 (90) | 18/20 (90) | 18/20 (90) | 19/20 (95) | |
| Total | 29/40 (72.5) | 29/40 (72.5) | 29/40 (72.5) | 31/40 (77.5) | ||
| Cheese | 1 | 46 | 9/20 (45) | 9/20 (45) | 9/20 (45) | 11/20 (55) |
| 2 | 98 | 17/20 (85) | 17/20 (85) | 17/20 (85) | 18/20 (90) | |
| Total | 26/40 (65) | 26/40 (65) | 26/40 (65) | 29/40 (72.5) | ||
| Vegetable salad | 1 | 485 | 6/20 (30) | 6/20 (30) | 8/20 (40) | 10/20 (50) |
| 2 | 1040 | 9/20 (45) | 9/20 (45) | 10/20 (50) | 12/20 (60) | |
| Total | 15/40 (37.5) | 15/40 (37.5) | 18/40 (45) | 22/40 (55) | ||
| Raw beef | 1 | 450 | 13/20 (65) | 13/20 (65) | 14/20 (70) | 15/20 (75) |
| 2 | 113 | 10/20 (50) | 11/20 (55) | 11/20 (55) | 12/20 (60) | |
| Total | 23/40 (57.5) | 24/40 (60) | 25/40 (62.5) | 27/40 (67.5) | ||
| Grand total | 93/160 (58.13)* | 94/160 (58.75)* | 98/160 (61.25) | 109/160 (68.13) | ||
*Significantly difference compared with real-time PCR (McNemar test, p<0.05).
PALCAM, polymyxin-acriflavine-LiCl-ceftazidime-aesculin-mannitol; PCR, polymerase chain reaction.