Literature DB >> 26751641

Assembly of methylated KDM1A and CHD1 drives androgen receptor-dependent transcription and translocation.

Eric Metzger1, Dominica Willmann1, Joel McMillan1,2, Ignasi Forne3, Philipp Metzger1, Stefan Gerhardt4, Kerstin Petroll1,5, Anne von Maessenhausen6, Sylvia Urban1, Anne-Kathrin Schott1, Alexsandra Espejo7, Adrien Eberlin1, Daniel Wohlwend4, Katrin M Schüle1, Michael Schleicher8, Sven Perner6, Mark T Bedford7, Manfred Jung9,10, Jörn Dengjel5, Ralf Flaig2, Axel Imhof3, Oliver Einsle4,11, Roland Schüle1,10,11.   

Abstract

Prostate cancer evolution is driven by a combination of epigenetic and genetic alterations such as coordinated chromosomal rearrangements, termed chromoplexy. TMPRSS2-ERG gene fusions found in human prostate tumors are a hallmark of chromoplexy. TMPRSS2-ERG fusions have been linked to androgen signaling and depend on androgen receptor (AR)-coupled gene transcription. Here, we show that dimethylation of KDM1A at K114 (to form K114me2) by the histone methyltransferase EHMT2 is a key event controlling androgen-dependent gene transcription and TMPRSS2-ERG fusion. We identified CHD1 as a KDM1A K114me2 reader and characterized the KDM1A K114me2-CHD1 recognition mode by solving the cocrystal structure. Genome-wide analyses revealed chromatin colocalization of KDM1A K114me2, CHD1 and AR in prostate tumor cells. Together, our data link the assembly of methylated KDM1A and CHD1 with AR-dependent transcription and genomic translocations, thereby providing mechanistic insight into the formation of TMPRSS2-ERG gene fusions during prostate-tumor evolution.

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Year:  2016        PMID: 26751641     DOI: 10.1038/nsmb.3153

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  45 in total

1.  Lysine methylation and functional modulation of androgen receptor by Set9 methyltransferase.

Authors:  Soyoung Ko; Jungmi Ahn; Chung S Song; Soyoung Kim; Katarzyna Knapczyk-Stwora; Bandana Chatterjee
Journal:  Mol Endocrinol       Date:  2011-01-27

2.  Quantitative analysis of chromosome conformation capture assays (3C-qPCR).

Authors:  Hélène Hagège; Petra Klous; Caroline Braem; Erik Splinter; Job Dekker; Guy Cathala; Wouter de Laat; Thierry Forné
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

3.  Androgen receptor coactivators lysine-specific histone demethylase 1 and four and a half LIM domain protein 2 predict risk of prostate cancer recurrence.

Authors:  Philip Kahl; Lucia Gullotti; Lukas Carl Heukamp; Susanne Wolf; Nicolaus Friedrichs; Roland Vorreuther; Gerold Solleder; Patrick J Bastian; Jörg Ellinger; Eric Metzger; Roland Schüle; Reinhard Buettner
Journal:  Cancer Res       Date:  2006-12-01       Impact factor: 12.701

4.  Phosphorylation of histone H3T6 by PKCbeta(I) controls demethylation at histone H3K4.

Authors:  Eric Metzger; Axel Imhof; Dharmeshkumar Patel; Philip Kahl; Katrin Hoffmeyer; Nicolaus Friedrichs; Judith M Müller; Holger Greschik; Jutta Kirfel; Sujuan Ji; Natalia Kunowska; Christian Beisenherz-Huss; Thomas Günther; Reinhard Buettner; Roland Schüle
Journal:  Nature       Date:  2010-03-14       Impact factor: 49.962

5.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

6.  Histone H3 lysine 9 methyltransferase G9a is a transcriptional coactivator for nuclear receptors.

Authors:  David Y Lee; Jeffrey P Northrop; Min-Hao Kuo; Michael R Stallcup
Journal:  J Biol Chem       Date:  2006-02-04       Impact factor: 5.157

7.  How good are my data and what is the resolution?

Authors:  Philip R Evans; Garib N Murshudov
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-06-13

8.  Identification of autophagosome-associated proteins and regulators by quantitative proteomic analysis and genetic screens.

Authors:  Jörn Dengjel; Maria Høyer-Hansen; Maria O Nielsen; Tobias Eisenberg; Lea M Harder; Søren Schandorff; Thomas Farkas; Thomas Kirkegaard; Andrea C Becker; Sabrina Schroeder; Katja Vanselow; Emma Lundberg; Mogens M Nielsen; Anders R Kristensen; Vyacheslav Akimov; Jakob Bunkenborg; Frank Madeo; Marja Jäättelä; Jens S Andersen
Journal:  Mol Cell Proteomics       Date:  2012-02-06       Impact factor: 5.911

9.  MolProbity: all-atom structure validation for macromolecular crystallography.

Authors:  Vincent B Chen; W Bryan Arendall; Jeffrey J Headd; Daniel A Keedy; Robert M Immormino; Gary J Kapral; Laura W Murray; Jane S Richardson; David C Richardson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  28 in total

1.  Lsd1 interacts with cMyb to demethylate repressive histone marks and maintain inner ear progenitor identity.

Authors:  Mohi Ahmed; Andrea Streit
Journal:  Development       Date:  2018-02-21       Impact factor: 6.868

2.  Fine-tuned KDM1A alternative splicing regulates human cardiomyogenesis through an enzymatic-independent mechanism.

Authors:  Veronica Astro; Gustavo Ramirez-Calderon; Roberta Pennucci; Jonatan Caroli; Alfonso Saera-Vila; Kelly Cardona-Londoño; Chiara Forastieri; Elisabetta Fiacco; Fatima Maksoud; Maryam Alowaysi; Elisa Sogne; Andrea Falqui; Federico Gonzàlez; Nuria Montserrat; Elena Battaglioli; Andrea Mattevi; Antonio Adamo
Journal:  iScience       Date:  2022-06-23

Review 3.  Targeting Epigenetics in Cancer.

Authors:  Richard L Bennett; Jonathan D Licht
Journal:  Annu Rev Pharmacol Toxicol       Date:  2017-10-06       Impact factor: 13.820

4.  CHD1 loss sensitizes prostate cancer to DNA damaging therapy by promoting error-prone double-strand break repair.

Authors:  T R Shenoy; G Boysen; M Y Wang; Q Z Xu; W Guo; F M Koh; C Wang; L Z Zhang; Y Wang; V Gil; S Aziz; R Christova; D N Rodrigues; M Crespo; P Rescigno; N Tunariu; R Riisnaes; Z Zafeiriou; P Flohr; W Yuan; E Knight; A Swain; M Ramalho-Santos; D Y Xu; J de Bono; H Wu
Journal:  Ann Oncol       Date:  2017-07-01       Impact factor: 32.976

5.  Lsd1 prevents age-programed loss of beige adipocytes.

Authors:  Delphine Duteil; Milica Tosic; Dominica Willmann; Anastasia Georgiadi; Toufike Kanouni; Roland Schüle
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-01       Impact factor: 11.205

6.  Identification and Characterization of Alternatively Spliced Transcript Isoforms of IRX4 in Prostate Cancer.

Authors:  Achala Fernando; Chamikara Liyanage; Afshin Moradi; Panchadsaram Janaththani; Jyotsna Batra
Journal:  Genes (Basel)       Date:  2021-04-21       Impact factor: 4.096

7.  Exploring aromatic cage flexibility of the histone methyllysine reader protein Spindlin1 and its impact on binding mode prediction: an in silico study.

Authors:  Chiara Luise; Dina Robaa; Wolfgang Sippl
Journal:  J Comput Aided Mol Des       Date:  2021-06-03       Impact factor: 3.686

8.  Lsd1 Ablation Triggers Metabolic Reprogramming of Brown Adipose Tissue.

Authors:  Delphine Duteil; Milica Tosic; Franziska Lausecker; Hatice Z Nenseth; Judith M Müller; Sylvia Urban; Dominica Willmann; Kerstin Petroll; Nadia Messaddeq; Laura Arrigoni; Thomas Manke; Jan-Wilhelm Kornfeld; Jens C Brüning; Vyacheslav Zagoriy; Michael Meret; Jörn Dengjel; Toufike Kanouni; Roland Schüle
Journal:  Cell Rep       Date:  2016-10-18       Impact factor: 9.423

Review 9.  Epigenomic Regulation of Androgen Receptor Signaling: Potential Role in Prostate Cancer Therapy.

Authors:  Vito Cucchiara; Joy C Yang; Vincenzo Mirone; Allen C Gao; Michael G Rosenfeld; Christopher P Evans
Journal:  Cancers (Basel)       Date:  2017-01-16       Impact factor: 6.639

Review 10.  Targeting histone methyltransferases and demethylases in clinical trials for cancer therapy.

Authors:  Ludovica Morera; Michael Lübbert; Manfred Jung
Journal:  Clin Epigenetics       Date:  2016-05-24       Impact factor: 6.551

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