| Literature DB >> 26738724 |
Jonathan Wee Kent Liew1, Rohela Mahmud2, Lian Huat Tan3, Yee Ling Lau4.
Abstract
Plasmodium ovale is rare and not exactly known to be autochthonous in Malaysia. There are two distinct forms of the parasite, namely P. ovale curtisi (classic form) and P. ovale wallikeri (variant form). Here, the first sequence confirmed case of an imported P. ovale wallikeri infection in Malaysia is presented. Microscopy found Plasmodium parasites with morphology similar to P. ovale or Plasmodium vivax in the blood films. Further confirmation using polymerase chain reaction (PCR) targeting the small-subunit rRNA gene of the parasite was unsuccessful. Genus-specific PCR was then performed and the product was sequenced and analysed. Sequence analyses confirmed the aetiological agent as P. ovale wallikeri. New species-specific primers (rOVA1v and rOVA2v) were employed and P. ovale wallikeri was finally confirmed. The findings highlight the need to look out for imported malaria infections in Malaysia and the importance of a constantly updated and validated diagnostic technique.Entities:
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Year: 2016 PMID: 26738724 PMCID: PMC4704402 DOI: 10.1186/s12936-015-1070-z
Source DB: PubMed Journal: Malar J ISSN: 1475-2875 Impact factor: 2.979
Fig. 1Microphotographs of giemsa-stained thin blood films of the patient viewed under 1000 × magnification. a Developing schizont. b A schizont with eight merozoites. c, d Gametocyte. Infected red blood cell is enlarged, oval in shape with presence of Schuffner’s dots, clearly seen in b and d
Description of PCR protocols used in this report
| Reaction | Primer | Annealing temperature (°C) | Product size (bp) | Target species | Reference |
|---|---|---|---|---|---|
|
| |||||
| Nest 1a | rPLU1/rPLU5 | 55 | ≈1670 |
| [ |
| Nest 2b | rPLU3/rPLU4 | 240 |
| ||
| rFal1/rFal2 | 205 |
| |||
| rVIV1/rVIV2 | 120 |
| |||
| rMAL1/rMAL2 | 145 |
| |||
| rOVA1/rOVA2 | 58 | 787–789 |
| ||
| Pmk8/Pmkr9 | 153 |
| [ | ||
| rOVA1v/rOVA2v | 782 |
| [ | ||
| rOVA1WC/rOVA2WC | 659–662 |
| [ | ||
|
| rOVA1/rOVA2 and rOVA1v/rOVA2v | 58 | 782–789 |
| [ |
|
| |||||
| Primary PCRd | UNR/PLF | 58 | 783–821 | Universal | [ |
| NM | New PLFshort with | 53 |
| ||
| MARshort | 241 |
| |||
| FARshort | 370 |
| |||
| OVRshort | 407 |
| |||
| VIRshort | 476 |
| |||
| NG-PCRf | NewPLFshort/NewRevshort | 53 | 735–773 |
| |
aCycling condition: Initial denaturation, 94 °C for 4 min; 35 cycles of 94 °C for 1 min, 55 °C for 1 min and 72 °C for 1 min; final extension 72 °C for 10 min. Four µL of DNA is used in a 25 µL reaction volume containing 4 mM magnesium chloride, 0.2 mM of each dNTPs and 1 Unit of Taq polymerase
bCycling condition: Initial denaturation, 94 °C for 4 min; 35 cycles of 94 °C for 1 min, 58 °C for 1 min and 72 °C for 1 min; final extension 72 °C for 10 min. Four µL of nest one product is used in a 25 µL reaction volume containing 4 mM magnesium chloride, 0.2 mM of each dNTPs and 1 Unit of Taq polymerase
cCycling condition is the same as Nest 2 PCRb. Primer sets rOVA1/rOVA2 and rOVA1v/rOVA2v are mixed in equimolar in a single PCR reaction tube. Four µL of nest one product is used in a 25 µL reaction volume containing 4 mM magnesium chloride, 0.2 mM of each dNTPs and 1 Unit of Taq polymerase
dCycling condition: Initial denaturation, 94 °C for 5 min; 35 cycles of 94 °C for 1 min, 58 °C for 1 min and 72 °C for 1 min; final extension 72 °C for 10 min. Five µL of DNA is used in a 50 µL reaction volume containing 4 mM magnesium chloride, 0.2 mM of each dNTPs and 2 Units of Taq polymerase
eCycling condition: Initial denaturation, 94 °C for 5 min; 35 cycles of 94 °C for 1 min, 53 °C for 1 min and 72 °C for 1 min; final extension 72 °C for 10 min. Two µL of Primary PCR product is used in a 25 µL reaction volume containing 4 mM magnesium chloride, 0.2 mM of each dNTPs and 1 Unit of Taq polymerase
fCycling condition is the same as NM-PCRe. Two µL of Primary PCR product is used in a 50 µL reaction volume containing 4 mM magnesium chloride, 0.2 mM of each dNTPs and 2 Units of Taq polymerase
Fig. 22 % agarose gel electrophoresis of Nest 2 PCR showing an amplified product with the genus-specific primers. 1 100 bp DNA ladder; 2 rFAL1/rFAL2 (P. falciparum); 3 rOVA1/rOVA2 (P. ovale); 4 rMAL1/rMAL2 (P. malariae); 5 rVIV1/rVIV2 (P. vivax); 6 Pmk8/Pmkr9 (P. knowlesi); 7 rPLU3/rPLU4 (Plasmodium spp.); 8–13 no template control of P. falciparum, P. ovale, P. malariae, P. vivax, P. knowlesi, and Plasmodium spp., respectively
Fig. 3Phylogenetic analysis of the NG-PCR product (UM00134). The phylogenetic tree is constructed using the Neighbor-Joining methods and Jukes–Cantor model, with Bootstrap value of 1000. The patient isolate, UM00134 is clustered with P. ovale wallikeri isolates. GenBank accession number is given after each isolate’s name
Fig. 4Detection of P. ovale wallikeri using primer sets rOVA1/rOVA2, rOVA1v/rOVA2v, mixture of both primer sets and rOVA1WC/rOVA2WC. A 2 % agarose gel electrophoresis was performed. Parasite DNA purified from patient blood is used as template of PCR. 1 100 bp DNA ladder; 2 rOVA1/rOVA2 (P. ovale curtisi); 3 rOVA1v/rOVA2v (P. ovale wallikeri); 4 Mixture of primer sets rOVA1/rOVA2 and rOVA1v/rOVA2v (both forms of P. ovale); 5 rOVA1WC/rOVA2WC (both forms of P. ovale)