Literature DB >> 26737346

A million-plus neuron model of the hippocampal dentate gyrus: Dependency of spatio-temporal network dynamics on topography.

Phillip J Hendrickson, Gene J Yu, Dong Song, Theodore W Berger.   

Abstract

This paper describes a million-plus granule cell compartmental model of the rat hippocampal dentate gyrus, including excitatory, perforant path input from the entorhinal cortex, and feedforward and feedback inhibitory input from dentate interneurons. The model includes experimentally determined morphological and biophysical properties of granule cells, together with glutamatergic AMPA-like EPSP and GABAergic GABAA-like IPSP synaptic excitatory and inhibitory inputs, respectively. Each granule cell was composed of approximately 200 compartments having passive and active conductances distributed throughout the somatic and dendritic regions. Modeling excitatory input from the entorhinal cortex was guided by axonal transport studies documenting the topographical organization of projections from subregions of the medial and lateral entorhinal cortex, plus other important details of the distribution of glutamatergic inputs to the dentate gyrus. Results showed that when medial and lateral entorhinal cortical neurons maintained Poisson random firing, dentate granule cells expressed, throughout the million-cell network, a robust, non-random pattern of spiking best described as spatiotemporal "clustering". To identify the network property or properties responsible for generating such firing "clusters", we progressively eliminated from the model key mechanisms such as feedforward and feedback inhibition, intrinsic membrane properties underlying rhythmic burst firing, and/or topographical organization of entorhinal afferents. Findings conclusively identified topographical organization of inputs as the key element responsible for generating a spatio-temporal distribution of clustered firing. These results uncover a functional organization of perforant path afferents to the dentate gyrus not previously recognized: topography-dependent clusters of granule cell activity as "functional units" that organize the processing of entorhinal signals.

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Year:  2015        PMID: 26737346      PMCID: PMC4878386          DOI: 10.1109/EMBC.2015.7319446

Source DB:  PubMed          Journal:  Conf Proc IEEE Eng Med Biol Soc        ISSN: 1557-170X


  2 in total

1.  Towards a large-scale biologically realistic model of the hippocampus.

Authors:  Phillip J Hendrickson; Gene J Yu; Brian S Robinson; Dong Song; Theodore W Berger
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2012

2.  Implementation of topographically constrained connectivity for a large-scale biologically realistic model of the hippocampus.

Authors:  Gene J Yu; Brian S Robinson; Phillip J Hendrickson; Dong Song; Theodore W Berger
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2012
  2 in total
  2 in total

1.  T2N as a new tool for robust electrophysiological modeling demonstrated for mature and adult-born dentate granule cells.

Authors:  Hermann Cuntz; Peter Jedlicka; Marcel Beining; Lucas Alberto Mongiat; Stephan Wolfgang Schwarzacher
Journal:  Elife       Date:  2017-11-22       Impact factor: 8.140

2.  A Glutamatergic Spine Model to Enable Multi-Scale Modeling of Nonlinear Calcium Dynamics.

Authors:  Eric Hu; Adam Mergenthal; Clayton S Bingham; Dong Song; Jean-Marie Bouteiller; Theodore W Berger
Journal:  Front Comput Neurosci       Date:  2018-07-27       Impact factor: 2.380

  2 in total

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