Literature DB >> 26736807

Early detection of heart failure with varying prediction windows by structured and unstructured data in electronic health records.

Yajuan Wang, Kenney Ng, Roy J Byrd, Jianying Hu, Shahram Ebadollahi, Zahra Daar, Christopher deFilippi, Steven R Steinhubl, Walter F Stewart.   

Abstract

Heart failure (HF) prevalence is increasing and is among the most costly diseases to society. Early detection of HF would provide the means to test lifestyle and pharmacologic interventions that may slow disease progression and improve patient outcomes. This study used structured and unstructured data from electronic health records (EHR) to predict onset of HF with a particular focus on how prediction accuracy varied in relation to time before diagnosis. EHR data were extracted from a single health care system and used to identify incident HF among primary care patients who received care between 2001 and 2010. A total of 1,684 incident HF cases were identified and 13,525 controls were selected from the same primary care practices. Models were compared by varying the beginning of the prediction window from 60 to 720 days before HF diagnosis. As the prediction window decreased, the performance [AUC (95% CIs)] of the predictive HF models increased from 65% (63%-66%) to 74% (73%-75%) for the unstructured, from 73% (72%-75%) to 81% (80%-83%) for the structured, and from 76% (74%-77%) to 83% (77%-85%) for the combined data.

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Year:  2015        PMID: 26736807      PMCID: PMC5233460          DOI: 10.1109/EMBC.2015.7318907

Source DB:  PubMed          Journal:  Conf Proc IEEE Eng Med Biol Soc        ISSN: 1557-170X


  9 in total

1.  Heart disease and stroke statistics--2012 update: a report from the American Heart Association.

Authors:  Véronique L Roger; Alan S Go; Donald M Lloyd-Jones; Emelia J Benjamin; Jarett D Berry; William B Borden; Dawn M Bravata; Shifan Dai; Earl S Ford; Caroline S Fox; Heather J Fullerton; Cathleen Gillespie; Susan M Hailpern; John A Heit; Virginia J Howard; Brett M Kissela; Steven J Kittner; Daniel T Lackland; Judith H Lichtman; Lynda D Lisabeth; Diane M Makuc; Gregory M Marcus; Ariane Marelli; David B Matchar; Claudia S Moy; Dariush Mozaffarian; Michael E Mussolino; Graham Nichol; Nina P Paynter; Elsayed Z Soliman; Paul D Sorlie; Nona Sotoodehnia; Tanya N Turan; Salim S Virani; Nathan D Wong; Daniel Woo; Melanie B Turner
Journal:  Circulation       Date:  2011-12-15       Impact factor: 29.690

Review 2.  Early detection of myocardial dysfunction and heart failure.

Authors:  Geoffrey de Couto; Maral Ouzounian; Peter P Liu
Journal:  Nat Rev Cardiol       Date:  2010-05-11       Impact factor: 32.419

3.  Heart disease and stroke statistics--2011 update: a report from the American Heart Association.

Authors:  Véronique L Roger; Alan S Go; Donald M Lloyd-Jones; Robert J Adams; Jarett D Berry; Todd M Brown; Mercedes R Carnethon; Shifan Dai; Giovanni de Simone; Earl S Ford; Caroline S Fox; Heather J Fullerton; Cathleen Gillespie; Kurt J Greenlund; Susan M Hailpern; John A Heit; P Michael Ho; Virginia J Howard; Brett M Kissela; Steven J Kittner; Daniel T Lackland; Judith H Lichtman; Lynda D Lisabeth; Diane M Makuc; Gregory M Marcus; Ariane Marelli; David B Matchar; Mary M McDermott; James B Meigs; Claudia S Moy; Dariush Mozaffarian; Michael E Mussolino; Graham Nichol; Nina P Paynter; Wayne D Rosamond; Paul D Sorlie; Randall S Stafford; Tanya N Turan; Melanie B Turner; Nathan D Wong; Judith Wylie-Rosett
Journal:  Circulation       Date:  2010-12-15       Impact factor: 29.690

4.  Heart disease and stroke statistics--2014 update: a report from the American Heart Association.

Authors:  Alan S Go; Dariush Mozaffarian; Véronique L Roger; Emelia J Benjamin; Jarett D Berry; Michael J Blaha; Shifan Dai; Earl S Ford; Caroline S Fox; Sheila Franco; Heather J Fullerton; Cathleen Gillespie; Susan M Hailpern; John A Heit; Virginia J Howard; Mark D Huffman; Suzanne E Judd; Brett M Kissela; Steven J Kittner; Daniel T Lackland; Judith H Lichtman; Lynda D Lisabeth; Rachel H Mackey; David J Magid; Gregory M Marcus; Ariane Marelli; David B Matchar; Darren K McGuire; Emile R Mohler; Claudia S Moy; Michael E Mussolino; Robert W Neumar; Graham Nichol; Dilip K Pandey; Nina P Paynter; Matthew J Reeves; Paul D Sorlie; Joel Stein; Amytis Towfighi; Tanya N Turan; Salim S Virani; Nathan D Wong; Daniel Woo; Melanie B Turner
Journal:  Circulation       Date:  2013-12-18       Impact factor: 29.690

5.  Deaths: final data for 2010.

Authors:  Sherry L Murphy; Jiaquan Xu; Kenneth D Kochanek
Journal:  Natl Vital Stat Rep       Date:  2013-05-08

6.  Automatic identification of heart failure diagnostic criteria, using text analysis of clinical notes from electronic health records.

Authors:  Roy J Byrd; Steven R Steinhubl; Jimeng Sun; Shahram Ebadollahi; Walter F Stewart
Journal:  Int J Med Inform       Date:  2013-01-11       Impact factor: 4.046

Review 7.  Diagnosis and evaluation of heart failure.

Authors:  Michael King; Joe Kingery; Baretta Casey
Journal:  Am Fam Physician       Date:  2012-06-15       Impact factor: 3.292

8.  Trends in heart failure incidence and survival in a community-based population.

Authors:  Véronique L Roger; Susan A Weston; Margaret M Redfield; Jens P Hellermann-Homan; Jill Killian; Barbara P Yawn; Steven J Jacobsen
Journal:  JAMA       Date:  2004-07-21       Impact factor: 56.272

9.  Combining knowledge and data driven insights for identifying risk factors using electronic health records.

Authors:  Jimeng Sun; Jianying Hu; Dijun Luo; Marianthi Markatou; Fei Wang; Shahram Edabollahi; Steven E Steinhubl; Zahra Daar; Walter F Stewart
Journal:  AMIA Annu Symp Proc       Date:  2012-11-03
  9 in total
  15 in total

1.  Characterizing Physicians Practice Phenotype from Unstructured Electronic Health Records.

Authors:  Sanjoy Dey; Yajuan Wang; Roy J Byrd; Kenney Ng; Steven R Steinhubl; Christopher deFilippi; Walter F Stewart
Journal:  AMIA Annu Symp Proc       Date:  2017-02-10

2.  Early Detection of Heart Failure Using Electronic Health Records: Practical Implications for Time Before Diagnosis, Data Diversity, Data Quantity, and Data Density.

Authors:  Kenney Ng; Steven R Steinhubl; Christopher deFilippi; Sanjoy Dey; Walter F Stewart
Journal:  Circ Cardiovasc Qual Outcomes       Date:  2016-11-08

3.  Leveraging Clinical Time-Series Data for Prediction: A Cautionary Tale.

Authors:  Eli Sherman; Hitinder Gurm; Ulysses Balis; Scott Owens; Jenna Wiens
Journal:  AMIA Annu Symp Proc       Date:  2018-04-16

4.  Identifying Cancer Patients at Risk for Heart Failure Using Machine Learning Methods.

Authors:  Xi Yang; Yan Gong; Nida Waheed; Keith March; Jiang Bian; William R Hogan; Yonghui Wu
Journal:  AMIA Annu Symp Proc       Date:  2020-03-04

Review 5.  Evidence of Clonal Hematopoiesis and Risk of Heart Failure.

Authors:  Peter Bazeley; Rommel Morales; W H Wilson Tang
Journal:  Curr Heart Fail Rep       Date:  2020-10

Review 6.  Natural Language Processing for EHR-Based Computational Phenotyping.

Authors:  Zexian Zeng; Yu Deng; Xiaoyu Li; Tristan Naumann; Yuan Luo
Journal:  IEEE/ACM Trans Comput Biol Bioinform       Date:  2018-06-25       Impact factor: 3.710

7.  LSTM Model for Prediction of Heart Failure in Big Data.

Authors:  G Maragatham; Shobana Devi
Journal:  J Med Syst       Date:  2019-03-19       Impact factor: 4.460

Review 8.  Factors influencing the development of primary care data collection projects from electronic health records: a systematic review of the literature.

Authors:  Marie-Line Gentil; Marc Cuggia; Laure Fiquet; Camille Hagenbourger; Thomas Le Berre; Agnès Banâtre; Eric Renault; Guillaume Bouzille; Anthony Chapron
Journal:  BMC Med Inform Decis Mak       Date:  2017-09-25       Impact factor: 2.796

9.  Using recurrent neural network models for early detection of heart failure onset.

Authors:  Edward Choi; Andy Schuetz; Walter F Stewart; Jimeng Sun
Journal:  J Am Med Inform Assoc       Date:  2017-03-01       Impact factor: 4.497

10.  Columbia Open Health Data, clinical concept prevalence and co-occurrence from electronic health records.

Authors:  Casey N Ta; Michel Dumontier; George Hripcsak; Nicholas P Tatonetti; Chunhua Weng
Journal:  Sci Data       Date:  2018-11-27       Impact factor: 6.444

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