Literature DB >> 26733304

Uncovering the roles of long noncoding RNAs in neural development and glioma progression.

Alexander D Ramos1, Frank J Attenello1, Daniel A Lim2.   

Abstract

In the past decade, thousands of long noncoding RNAs (lncRNAs) have been identified, and emerging data indicate that lncRNAs can have important biological functions and roles in human diseases including cancer. Many lncRNAs appear to be expressed specifically in the brain, and the roles of lncRNAs in neural stem cells (NSCs) and brain development are now beginning to be discovered. Here we review recent advances in understanding the diversity of lncRNA structure and functions in NSCs and brain development. NSCs in the adult mouse ventricular-subventricular zone (V-SVZ) generate new neurons throughout life, and we discuss how key elements of this adult neurogenic system have facilitated the discovery and functional characterization of known and novel lncRNAs. A review of lncRNAs described in other NSC systems reveals a variety of molecular mechanisms, including binding and recruitment of transcription factors, epigenetic modifiers, and RNA-splicing factors. Finally, we review emerging evidence indicating that specific lncRNAs can be key drivers of glial tumors, and discuss next steps towards an in vivo understanding of lncRNA function in development and disease. Published by Elsevier Ireland Ltd.

Entities:  

Keywords:  Brain development; Brain tumor; Cell; Chromatin; Epigenetics; Glioma; Long noncoding RNA; Neural stem; Neurogenesis; lncRNA

Mesh:

Substances:

Year:  2015        PMID: 26733304      PMCID: PMC5094911          DOI: 10.1016/j.neulet.2015.12.025

Source DB:  PubMed          Journal:  Neurosci Lett        ISSN: 0304-3940            Impact factor:   3.046


  100 in total

1.  Mosaic organization of neural stem cells in the adult brain.

Authors:  Florian T Merkle; Zaman Mirzadeh; Arturo Alvarez-Buylla
Journal:  Science       Date:  2007-07-05       Impact factor: 47.728

2.  Restricted proliferation and migration of postnatally generated neurons derived from the forebrain subventricular zone.

Authors:  M B Luskin
Journal:  Neuron       Date:  1993-07       Impact factor: 17.173

3.  Glial tubes in the rostral migratory stream of the adult rat.

Authors:  P Peretto; A Merighi; A Fasolo; L Bonfanti
Journal:  Brain Res Bull       Date:  1997       Impact factor: 4.077

Review 4.  Long noncoding RNAs: cellular address codes in development and disease.

Authors:  Pedro J Batista; Howard Y Chang
Journal:  Cell       Date:  2013-03-14       Impact factor: 41.582

5.  Expression of a noncoding RNA is elevated in Alzheimer's disease and drives rapid feed-forward regulation of beta-secretase.

Authors:  Mohammad Ali Faghihi; Farzaneh Modarresi; Ahmad M Khalil; Douglas E Wood; Barbara G Sahagan; Todd E Morgan; Caleb E Finch; Georges St Laurent; Paul J Kenny; Claes Wahlestedt
Journal:  Nat Med       Date:  2008-06-29       Impact factor: 53.440

6.  Disruption of a large intergenic noncoding RNA in subjects with neurodevelopmental disabilities.

Authors:  Michael E Talkowski; Gilles Maussion; Liam Crapper; Jill A Rosenfeld; Ian Blumenthal; Carrie Hanscom; Colby Chiang; Amelia Lindgren; Shahrin Pereira; Douglas Ruderfer; Alpha B Diallo; Juan Pablo Lopez; Gustavo Turecki; Elizabeth S Chen; Carolina Gigek; David J Harris; Va Lip; Yu An; Marta Biagioli; Marcy E Macdonald; Michael Lin; Stephen J Haggarty; Pamela Sklar; Shaun Purcell; Manolis Kellis; Stuart Schwartz; Lisa G Shaffer; Marvin R Natowicz; Yiping Shen; Cynthia C Morton; James F Gusella; Carl Ernst
Journal:  Am J Hum Genet       Date:  2012-12-07       Impact factor: 11.025

7.  An evolutionarily conserved long noncoding RNA TUNA controls pluripotency and neural lineage commitment.

Authors:  Nianwei Lin; Kung-Yen Chang; Zhonghan Li; Keith Gates; Zacharia A Rana; Jason Dang; Danhua Zhang; Tianxu Han; Chao-Shun Yang; Thomas J Cunningham; Steven R Head; Gregg Duester; P Duc Si Dong; Tariq M Rana
Journal:  Mol Cell       Date:  2014-02-13       Impact factor: 17.970

8.  Prospective identification of functionally distinct stem cells and neurosphere-initiating cells in adult mouse forebrain.

Authors:  John K Mich; Robert Aj Signer; Daisuke Nakada; André Pineda; Rebecca J Burgess; Tou Yia Vue; Jane E Johnson; Sean J Morrison
Journal:  Elife       Date:  2014-05-07       Impact factor: 8.140

9.  Lineage progression from stem cells to new neurons in the adult brain ventricular-subventricular zone.

Authors:  Giovanna Ponti; Kirsten Obernier; Arturo Alvarez-Buylla
Journal:  Cell Cycle       Date:  2013-05-10       Impact factor: 4.534

Review 10.  Considerations when investigating lncRNA function in vivo.

Authors:  Andrew R Bassett; Asifa Akhtar; Denise P Barlow; Adrian P Bird; Neil Brockdorff; Denis Duboule; Anne Ephrussi; Anne C Ferguson-Smith; Thomas R Gingeras; Wilfried Haerty; Douglas R Higgs; Eric A Miska; Chris P Ponting
Journal:  Elife       Date:  2014-08-14       Impact factor: 8.140

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  28 in total

1.  Identification of neural stem cell differentiation repressor complex Pnky-PTBP1.

Authors:  Ioannis Grammatikakis; Myriam Gorospe
Journal:  Stem Cell Investig       Date:  2016-04-07

Review 2.  Mouse models of Down syndrome: gene content and consequences.

Authors:  Meenal Gupta; A Ranjitha Dhanasekaran; Katheleen J Gardiner
Journal:  Mamm Genome       Date:  2016-08-18       Impact factor: 2.957

3.  Long noncoding RNA eosinophil granule ontogeny transcript inhibits cell proliferation and migration and promotes cell apoptosis in human glioma.

Authors:  You Wu; Shunli Liang; Bin Xu; Rongbo Zhang; Minzi Zhu; Weiying Zhou; Shuijing Zhang; Jinhui Guo; Linsheng Xu; Hongye Zhu
Journal:  Exp Ther Med       Date:  2017-08-16       Impact factor: 2.447

Review 4.  Prognostic and clinicopathological significance of long non-coding RNA in glioma.

Authors:  Junhong Li; Ruofei Liang; Chen Song; Yufan Xiang; Yanhui Liu
Journal:  Neurosurg Rev       Date:  2018-03-21       Impact factor: 3.042

Review 5.  Integrating RNA sequencing into neuro-oncology practice.

Authors:  David S Rogawski; Nicholas A Vitanza; Angela C Gauthier; Vijay Ramaswamy; Carl Koschmann
Journal:  Transl Res       Date:  2017-07-08       Impact factor: 7.012

6.  Long non-coding RNA MSTRG.81401 short hairpin RNA relieves diabetic neuropathic pain and behaviors of depression by inhibiting P2X4 receptor expression in type 2 diabetic rats.

Authors:  Mengyun Sun; Mingming Zhang; Haoming Yin; Hongcheng Tu; Yuqing Wen; Xingyu Wei; Wenhao Shen; Ruoyu Huang; Wei Xiong; Guodong Li; Yun Gao
Journal:  Purinergic Signal       Date:  2022-01-13       Impact factor: 3.765

Review 7.  Noncoding RNAs in neurodegeneration.

Authors:  Evgenia Salta; Bart De Strooper
Journal:  Nat Rev Neurosci       Date:  2017-08-17       Impact factor: 34.870

8.  CRNDE Promotes Malignant Progression of Glioma by Attenuating miR-384/PIWIL4/STAT3 Axis.

Authors:  Jian Zheng; Xiaobai Liu; Ping Wang; Yixue Xue; Jun Ma; Chengbin Qu; Yunhui Liu
Journal:  Mol Ther       Date:  2016-04-08       Impact factor: 11.454

9.  Identifying cortical specific long noncoding RNAs modified by m6A RNA methylation in mouse brains.

Authors:  Yanzhen Nie; Geng G Tian; Longbin Zhang; Trevor Lee; Zhen Zhang; Jing Li; Tao Sun
Journal:  Epigenetics       Date:  2020-12-23       Impact factor: 4.528

10.  LncRNA and mRNA Expression Profiles in Methylprednisolone Stimulated Neural Stem Cells.

Authors:  Yong Tang; Zhongyu Xie; Mengjun Ma; Kaidi Duan; Yuxi Li; Jichao Ye
Journal:  Front Neurosci       Date:  2021-06-23       Impact factor: 4.677

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