Literature DB >> 26732873

Site-specific tagging proteins with a rigid, small and stable transition metal chelator, 8-hydroxyquinoline, for paramagnetic NMR analysis.

Yin Yang1, Feng Huang1, Thomas Huber2, Xun-Cheng Su3.   

Abstract

Design of a paramagnetic metal binding motif in a protein is a valuable way for understanding the function, dynamics and interactions of a protein by paramagnetic NMR spectroscopy. Several strategies have been proposed to site-specifically tag proteins with paramagnetic lanthanide ions. Here we report a simple approach of engineering a transition metal binding motif via site-specific labelling of a protein with 2-vinyl-8-hydroxyquinoline (2V-8HQ). The protein-2V-8HQ adduct forms a stable complex with transition metal ions, Mn(II), Co(II), Ni(II), Cu(II) and Zn(II). The paramagnetic effects generated by these transition metal ions were evaluated by NMR spectroscopy. We show that 2V-8HQ is a rigid and stable transition metal binding tag. The coordination of the metal ion can be assisted by protein sidechains. More importantly, tunable paramagnetic tensors are simply obtained in an α-helix that possesses solvent exposed residues in positions i and i + 3, where i is the residue to be mutated to cysteine, i + 3 is Gln or Glu or i - 4 is His. The coordination of a sidechain carboxylate/amide or imidazole to cobalt(II) results in different structural geometries, leading to different paramagnetic tensors as shown by experimental data.

Entities:  

Keywords:  8-Hydroxyquinoline; Paramagnetic NMR spectroscopy; Paramagnetic relaxation enhancement; Protein labeling; Pseudocontact shift

Mesh:

Substances:

Year:  2016        PMID: 26732873     DOI: 10.1007/s10858-016-0011-7

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  49 in total

Review 1.  Paramagnetic tagging of diamagnetic proteins for solution NMR.

Authors:  Fernando Rodriguez-Castañeda; Peter Haberz; Andrei Leonov; Christian Griesinger
Journal:  Magn Reson Chem       Date:  2006-07       Impact factor: 2.447

2.  Generation of pseudocontact shifts in protein NMR spectra with a genetically encoded cobalt(II)-binding amino acid.

Authors:  Thi Hoang Duong Nguyen; Kiyoshi Ozawa; Mitchell Stanton-Cook; Russell Barrow; Thomas Huber; Gottfried Otting
Journal:  Angew Chem Int Ed Engl       Date:  2010-11-25       Impact factor: 15.336

3.  Crystallographic analysis of metal-ion binding to human ubiquitin.

Authors:  Fabio Arnesano; Benny Danilo Belviso; Rocco Caliandro; Giuseppe Falini; Simona Fermani; Giovanni Natile; Dritan Siliqi
Journal:  Chemistry       Date:  2010-12-10       Impact factor: 5.236

4.  Paramagnetic relaxation enhancement of membrane proteins by incorporation of the metal-chelating unnatural amino acid 2-amino-3-(8-hydroxyquinolin-3-yl)propanoic acid (HQA).

Authors:  Sang Ho Park; Vivian S Wang; Jasmina Radoicic; Anna A De Angelis; Sabrina Berkamp; Stanley J Opella
Journal:  J Biomol NMR       Date:  2014-11-28       Impact factor: 2.835

Review 5.  Expanding the utility of NMR restraints with paramagnetic compounds: background and practical aspects.

Authors:  Julia Koehler; Jens Meiler
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2011-05-27       Impact factor: 9.795

6.  Aqueous sodium hydroxide promoted cross-coupling reactions of alkenyltrialkoxysilanes under ligand-free conditions.

Authors:  Emilio Alacid; Carmen Najera
Journal:  J Org Chem       Date:  2008-02-20       Impact factor: 4.354

7.  Site-specific labeling of proteins with a chemically stable, high-affinity tag for protein study.

Authors:  Yin Yang; Qing-Feng Li; Chan Cao; Feng Huang; Xun-Cheng Su
Journal:  Chemistry       Date:  2012-11-14       Impact factor: 5.236

8.  Bioconjugation of proteins with a paramagnetic NMR and fluorescent tag.

Authors:  Feng Huang; Ying-Ying Pei; Hui-Hui Zuo; Jia-Liang Chen; Yin Yang; Xun-Cheng Su
Journal:  Chemistry       Date:  2013-11-07       Impact factor: 5.236

9.  Genetic incorporation of a metal-ion chelating amino acid into proteins as a biophysical probe.

Authors:  Hyun Soo Lee; Glen Spraggon; Peter G Schultz; Feng Wang
Journal:  J Am Chem Soc       Date:  2009-02-25       Impact factor: 15.419

10.  Improved cross validation of a static ubiquitin structure derived from high precision residual dipolar couplings measured in a drug-based liquid crystalline phase.

Authors:  Alexander S Maltsev; Alexander Grishaev; Julien Roche; Michael Zasloff; Ad Bax
Journal:  J Am Chem Soc       Date:  2014-03-03       Impact factor: 15.419

View more
  2 in total

Review 1.  Paramagnetic Chemical Probes for Studying Biological Macromolecules.

Authors:  Qing Miao; Christoph Nitsche; Henry Orton; Mark Overhand; Gottfried Otting; Marcellus Ubbink
Journal:  Chem Rev       Date:  2022-01-27       Impact factor: 72.087

Review 2.  A Double-Armed, Hydrophilic Transition Metal Complex as a Paramagnetic NMR Probe.

Authors:  Qing Miao; Wei-Min Liu; Thomas Kock; Anneloes Blok; Monika Timmer; Mark Overhand; Marcellus Ubbink
Journal:  Angew Chem Int Ed Engl       Date:  2019-08-13       Impact factor: 15.336

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.