Literature DB >> 26732754

Epigenome Editing: State of the Art, Concepts, and Perspectives.

Goran Kungulovski1, Albert Jeltsch2.   

Abstract

Epigenome editing refers to the directed alteration of chromatin marks at specific genomic loci by using targeted EpiEffectors which comprise designed DNA recognition domains (zinc finger, TAL effector, or modified CRISPR/Cas9 complex) and catalytic domains from a chromatin-modifying enzyme. Epigenome editing is a promising approach for durable gene regulation, with many applications in basic research including the investigation of the regulatory functions and logic of chromatin modifications and cellular reprogramming. From a clinical point of view, targeted regulation of disease-related genes offers novel therapeutic avenues for many diseases. We review here the progress made in this field and discuss open questions in epigenetic regulation and its stability, methods to increase the specificity of epigenome editing, and improved delivery methods for targeted EpiEffectors. Future work will reveal if the approach of epigenome editing fulfills its great promise in basic research and clinical applications.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Keywords:  DNA recognition; cell reprogramming; chromatin modification; gene regulation; molecular epigenetics; synthetic biology

Mesh:

Substances:

Year:  2015        PMID: 26732754     DOI: 10.1016/j.tig.2015.12.001

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  52 in total

1.  Emerging Chemistry Strategies for Engineering Native Chromatin.

Authors:  Yael David; Tom W Muir
Journal:  J Am Chem Soc       Date:  2017-06-27       Impact factor: 15.419

Review 2.  Characterization of noncoding regulatory DNA in the human genome.

Authors:  Ran Elkon; Reuven Agami
Journal:  Nat Biotechnol       Date:  2017-08-08       Impact factor: 54.908

Review 3.  Drugging the pain epigenome.

Authors:  Ellen Niederberger; Eduard Resch; Michael J Parnham; Gerd Geisslinger
Journal:  Nat Rev Neurol       Date:  2017-05-26       Impact factor: 42.937

4.  Targeted DNA demethylation in human cells by fusion of a plant 5-methylcytosine DNA glycosylase to a sequence-specific DNA binding domain.

Authors:  Jara Teresa Parrilla-Doblas; Rafael R Ariza; Teresa Roldán-Arjona
Journal:  Epigenetics       Date:  2017-02-23       Impact factor: 4.528

Review 5.  Factors and molecules that could impact cell differentiation in the embryo generated by nuclear transfer.

Authors:  Renata Simões; Arnaldo Rodrigues Santos
Journal:  Organogenesis       Date:  2017-10-02       Impact factor: 2.500

6.  Designing Epigenome Editors: Considerations of Biochemical and Locus Specificities.

Authors:  Dilara Sen; Albert J Keung
Journal:  Methods Mol Biol       Date:  2018

Review 7.  The evolving metabolic landscape of chromatin biology and epigenetics.

Authors:  Ziwei Dai; Vijyendra Ramesh; Jason W Locasale
Journal:  Nat Rev Genet       Date:  2020-09-09       Impact factor: 53.242

Review 8.  Somatic Cell Nuclear Transfer Reprogramming: Mechanisms and Applications.

Authors:  Shogo Matoba; Yi Zhang
Journal:  Cell Stem Cell       Date:  2018-07-19       Impact factor: 24.633

Review 9.  Cancer induction and suppression with transcriptional control and epigenome editing technologies.

Authors:  Shota Nakade; Takashi Yamamoto; Tetsushi Sakuma
Journal:  J Hum Genet       Date:  2017-11-14       Impact factor: 3.172

10.  A DNA Methylation Reader-Chaperone Regulator-Transcription Factor Complex Activates OsHKT1;5 Expression during Salinity Stress.

Authors:  Jie Wang; Nan Nan; Ning Li; Yutong Liu; Tian-Jing Wang; Inhwan Hwang; Bao Liu; Zheng-Yi Xu
Journal:  Plant Cell       Date:  2020-09-15       Impact factor: 11.277

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