Literature DB >> 26731693

Myocardial Infarct Segmentation From Magnetic Resonance Images for Personalized Modeling of Cardiac Electrophysiology.

Natalia A Trayanova1, Fijoy Vadakkumpadan1, Eranga Ukwatta1, Hermenegild Arevalo1, Kristina Li1, Jing Yuan2, Wu Qiu2, Peter Malamas1, Katherine C Wu3.   

Abstract

Accurate representation of myocardial infarct geometry is crucial to patient-specific computational modeling of the heart in ischemic cardiomyopathy. We have developed a methodology for segmentation of left ventricular (LV) infarct from clinically acquired, two-dimensional (2D), late-gadolinium enhanced cardiac magnetic resonance (LGE-CMR) images, for personalized modeling of ventricular electrophysiology. The infarct segmentation was expressed as a continuous min-cut optimization problem, which was solved using its dual formulation, the continuous max-flow (CMF). The optimization objective comprised of a smoothness term, and a data term that quantified the similarity between image intensity histograms of segmented regions and those of a set of training images. A manual segmentation of the LV myocardium was used to initialize and constrain the developed method. The three-dimensional geometry of infarct was reconstructed from its segmentation using an implicit, shape-based interpolation method. The proposed methodology was extensively evaluated using metrics based on geometry, and outcomes of individualized electrophysiological simulations of cardiac dys(function). Several existing LV infarct segmentation approaches were implemented, and compared with the proposed method. Our results demonstrated that the CMF method was more accurate than the existing approaches in reproducing expert manual LV infarct segmentations, and in electrophysiological simulations. The infarct segmentation method we have developed and comprehensively evaluated in this study constitutes an important step in advancing clinical applications of personalized simulations of cardiac electrophysiology.

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Year:  2015        PMID: 26731693      PMCID: PMC4891256          DOI: 10.1109/TMI.2015.2512711

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  55 in total

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Authors:  Jian-An Yao; Wajid Hussain; Pravina Patel; Nicholas S Peters; Penelope A Boyden; Andrew L Wit
Journal:  Circ Res       Date:  2003-01-30       Impact factor: 17.367

2.  Image-based estimation of ventricular fiber orientations for personalized modeling of cardiac electrophysiology.

Authors:  Fijoy Vadakkumpadan; Hermenegild Arevalo; Can Ceritoglu; Michael Miller; Natalia Trayanova
Journal:  IEEE Trans Med Imaging       Date:  2012-01-18       Impact factor: 10.048

3.  Impact of viability and scar tissue on response to cardiac resynchronization therapy in ischaemic heart failure patients.

Authors:  Claudia Ypenburg; Martin J Schalij; Gabe B Bleeker; Paul Steendijk; Eric Boersma; Petra Dibbets-Schneider; Marcel P M Stokkel; Ernst E van der Wall; Jeroen J Bax
Journal:  Eur Heart J       Date:  2006-11-22       Impact factor: 29.983

4.  Using the logarithm of odds to define a vector space on probabilistic atlases.

Authors:  Kilian M Pohl; John Fisher; Sylvain Bouix; Martha Shenton; Robert W McCarley; W Eric L Grimson; Ron Kikinis; William M Wells
Journal:  Med Image Anal       Date:  2007-06-22       Impact factor: 8.545

5.  Max-flow segmentation of the left ventricle by recovering subject-specific distributions via a bound of the Bhattacharyya measure.

Authors:  Ismail Ben Ayed; Hua-Mei Chen; Kumaradevan Punithakumar; Ian Ross; Shuo Li
Journal:  Med Image Anal       Date:  2011-05-26       Impact factor: 8.545

6.  Quantitative comparison of spontaneous and paced 12-lead electrocardiogram during right ventricular outflow tract ventricular tachycardia.

Authors:  Edward P Gerstenfeld; Sanjay Dixit; David J Callans; Yadavendra Rajawat; Robert Rho; Francis E Marchlinski
Journal:  J Am Coll Cardiol       Date:  2003-06-04       Impact factor: 24.094

Review 7.  From mitochondrial ion channels to arrhythmias in the heart: computational techniques to bridge the spatio-temporal scales.

Authors:  Gernot Plank; Lufang Zhou; Joseph L Greenstein; Sonia Cortassa; Raimond L Winslow; Brian O'Rourke; Natalia A Trayanova
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2008-09-28       Impact factor: 4.226

8.  Tachycardia in post-infarction hearts: insights from 3D image-based ventricular models.

Authors:  Hermenegild Arevalo; Gernot Plank; Patrick Helm; Henry Halperin; Natalia Trayanova
Journal:  PLoS One       Date:  2013-07-02       Impact factor: 3.240

9.  Standardized image interpretation and post processing in cardiovascular magnetic resonance: Society for Cardiovascular Magnetic Resonance (SCMR) board of trustees task force on standardized post processing.

Authors:  Jeanette Schulz-Menger; David A Bluemke; Jens Bremerich; Scott D Flamm; Mark A Fogel; Matthias G Friedrich; Raymond J Kim; Florian von Knobelsdorff-Brenkenhoff; Christopher M Kramer; Dudley J Pennell; Sven Plein; Eike Nagel
Journal:  J Cardiovasc Magn Reson       Date:  2013-05-01       Impact factor: 5.364

10.  Computational cardiology: the heart of the matter.

Authors:  Natalia A Trayanova
Journal:  ISRN Cardiol       Date:  2012-11-14
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  7 in total

1.  Computational Identification of Ventricular Arrhythmia Risk in Pediatric Myocarditis.

Authors:  Mark J Cartoski; Plamen P Nikolov; Adityo Prakosa; Patrick M Boyle; Philip J Spevak; Natalia A Trayanova
Journal:  Pediatr Cardiol       Date:  2019-03-06       Impact factor: 1.655

Review 2.  Imaging-Based Simulations for Predicting Sudden Death and Guiding Ventricular Tachycardia Ablation.

Authors:  Natalia A Trayanova; Farhad Pashakhanloo; Katherine C Wu; Henry R Halperin
Journal:  Circ Arrhythm Electrophysiol       Date:  2017-07

Review 3.  How personalized heart modeling can help treatment of lethal arrhythmias: A focus on ventricular tachycardia ablation strategies in post-infarction patients.

Authors:  Natalia A Trayanova; Ashish N Doshi; Adityo Prakosa
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2020-01-09

4.  Three-dimensional Deep Convolutional Neural Networks for Automated Myocardial Scar Quantification in Hypertrophic Cardiomyopathy: A Multicenter Multivendor Study.

Authors:  Ahmed S Fahmy; Ulf Neisius; Raymond H Chan; Ethan J Rowin; Warren J Manning; Martin S Maron; Reza Nezafat
Journal:  Radiology       Date:  2019-11-12       Impact factor: 11.105

5.  Reentry via high-frequency pacing in a mathematical model for human-ventricular cardiac tissue with a localized fibrotic region.

Authors:  Soling Zimik; Rahul Pandit
Journal:  Sci Rep       Date:  2017-11-10       Impact factor: 4.379

6.  Personalized Cardiac Computational Models: From Clinical Data to Simulation of Infarct-Related Ventricular Tachycardia.

Authors:  Alejandro Lopez-Perez; Rafael Sebastian; M Izquierdo; Ricardo Ruiz; Martin Bishop; Jose M Ferrero
Journal:  Front Physiol       Date:  2019-05-15       Impact factor: 4.566

7.  An Improved 3D Deep Learning-Based Segmentation of Left Ventricular Myocardial Diseases from Delayed-Enhancement MRI with Inclusion and Classification Prior Information U-Net (ICPIU-Net).

Authors:  Khawla Brahim; Tewodros Weldebirhan Arega; Arnaud Boucher; Stephanie Bricq; Anis Sakly; Fabrice Meriaudeau
Journal:  Sensors (Basel)       Date:  2022-03-08       Impact factor: 3.576

  7 in total

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