| Literature DB >> 26724815 |
Hesam Dashti1,2, Marco Tonelli2, Woonghee Lee2, William M Westler2, Gabriel Cornilescu2, Eldon L Ulrich3, John L Markley4,5.
Abstract
Data validation plays an important role in ensuring the reliability and reproducibility of studies. NMR investigations of the functional properties, dynamics, chemical kinetics, and structures of proteins depend critically on the correctness of chemical shift assignments. We present a novel probabilistic method named ARECA for validating chemical shift assignments that relies on the nuclear Overhauser effect data . ARECA has been evaluated through its application to 26 case studies and has been shown to be complementary to, and usually more reliable than, approaches based on chemical shift databases. ARECA is available online at http://areca.nmrfam.wisc.edu/.Entities:
Keywords: NMR chemical shift assignments; NOESY experiment; Probabilistic method; Validation
Mesh:
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Year: 2016 PMID: 26724815 PMCID: PMC4744101 DOI: 10.1007/s10858-015-0007-8
Source DB: PubMed Journal: J Biomol NMR ISSN: 0925-2738 Impact factor: 2.835