Literature DB >> 26724385

Effects of protein crowding on membrane systems.

Gernot Guigas1, Matthias Weiss2.   

Abstract

Cellular membranes are typically decorated with a plethora of embedded and adsorbed macromolecules, e.g. proteins, that participate in numerous vital processes. With typical surface densities of 30,000 proteins per μm(2) cellular membranes are indeed crowded places that leave only few nanometers of private space for individual proteins. Here, we review recent advances in our understanding of protein crowding in membrane systems. We first give a brief overview on state-of-the-art approaches in experiment and simulation that are frequently used to study crowded membranes. After that, we review how crowding can affect diffusive transport of proteins and lipids in membrane systems. Next, we discuss lipid and protein sorting in crowded membrane systems, including effects like protein cluster formation, phase segregation, and lipid droplet formation. Subsequently, we highlight recent progress in uncovering crowding-induced conformational changes of membranes, e.g. membrane budding and vesicle formation. Finally, we give a short outlook on potential future developments in the field of crowded membrane systems. This article is part of a Special Issue entitled: Biosimulations edited by Ilpo Vattulainen and Tomasz Róg.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Anomalous diffusion; Biomembranes; Diffusion; Hydrophobic mismatch; Macromolecular crowding; Membrane traffic; Protein sorting

Mesh:

Substances:

Year:  2015        PMID: 26724385     DOI: 10.1016/j.bbamem.2015.12.021

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  29 in total

1.  Multiscale Simulations of Biological Membranes: The Challenge To Understand Biological Phenomena in a Living Substance.

Authors:  Giray Enkavi; Matti Javanainen; Waldemar Kulig; Tomasz Róg; Ilpo Vattulainen
Journal:  Chem Rev       Date:  2019-03-12       Impact factor: 60.622

2.  Active Transport of Membrane Components by Self-Organization of the Min Proteins.

Authors:  Yu-Ling Shih; Ling-Ting Huang; Yu-Ming Tu; Bo-Fan Lee; Yu-Chiuan Bau; Chia Yee Hong; Hsiao-Lin Lee; Yan-Ping Shih; Min-Feng Hsu; Zheng-Xin Lu; Jui-Szu Chen; Ling Chao
Journal:  Biophys J       Date:  2019-03-23       Impact factor: 4.033

Review 3.  Microscopic Characterization of Membrane Transporter Function by In Silico Modeling and Simulation.

Authors:  J V Vermaas; N Trebesch; C G Mayne; S Thangapandian; M Shekhar; P Mahinthichaichan; J L Baylon; T Jiang; Y Wang; M P Muller; E Shinn; Z Zhao; P-C Wen; E Tajkhorshid
Journal:  Methods Enzymol       Date:  2016-07-11       Impact factor: 1.600

4.  Shear-Induced Migration of a Transmembrane Protein within a Vesicle.

Authors:  Koyo Nakamura; Toshihiro Omori; Takuji Ishikawa
Journal:  Biophys J       Date:  2019-03-28       Impact factor: 4.033

Review 5.  Whole-Cell Models and Simulations in Molecular Detail.

Authors:  Michael Feig; Yuji Sugita
Journal:  Annu Rev Cell Dev Biol       Date:  2019-07-12       Impact factor: 13.827

6.  Protein crowding mediates membrane remodeling in upstream ESCRT-induced formation of intraluminal vesicles.

Authors:  Susanne Liese; Eva Maria Wenzel; Ingrid Kjos; Rossana Rojas Molina; Sebastian W Schultz; Andreas Brech; Harald Stenmark; Camilla Raiborg; Andreas Carlson
Journal:  Proc Natl Acad Sci U S A       Date:  2020-11-02       Impact factor: 11.205

7.  Moonlighting Function of Phytochelatin Synthase1 in Extracellular Defense against Fungal Pathogens.

Authors:  Kian Hématy; Melisa Lim; Candice Cherk; Mariola Piślewska-Bednarek; Clara Sanchez-Rodriguez; Monica Stein; Rene Fuchs; Christine Klapprodt; Volker Lipka; Antonio Molina; Erwin Grill; Paul Schulze-Lefert; Paweł Bednarek; Shauna Somerville
Journal:  Plant Physiol       Date:  2020-01-28       Impact factor: 8.340

8.  Ultrafast Dynamics at Lipid-Water Interfaces.

Authors:  Jennifer C Flanagan; Mason L Valentine; Carlos R Baiz
Journal:  Acc Chem Res       Date:  2020-08-31       Impact factor: 22.384

9.  Searching for principles of microbial physiology.

Authors:  Frank J Bruggeman; Robert Planqué; Douwe Molenaar; Bas Teusink
Journal:  FEMS Microbiol Rev       Date:  2020-11-24       Impact factor: 16.408

10.  Investigating the interactions of the first 17 amino acid residues of Huntingtin with lipid vesicles using mass spectrometry and molecular dynamics.

Authors:  Ahmad Kiani Karanji; Maryssa Beasley; Daud Sharif; Ali Ranjbaran; Justin Legleiter; Stephen J Valentine
Journal:  J Mass Spectrom       Date:  2019-12-16       Impact factor: 1.982

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