Literature DB >> 26723623

Coarse-grained model of adsorption of blood plasma proteins onto nanoparticles.

Hender Lopez1, Vladimir Lobaskin1.   

Abstract

We present a coarse-grained model for evaluation of interactions of globular proteins with nanoparticles (NPs). The protein molecules are represented by one bead per aminoacid and the nanoparticle by a homogeneous sphere that interacts with the aminoacids via a central force that depends on the nanoparticle size. The proposed methodology is used to predict the adsorption energies for six common human blood plasma proteins on hydrophobic charged or neutral nanoparticles of different sizes as well as the preferred orientation of the molecules upon adsorption. Our approach allows one to rank the proteins by their binding affinity to the nanoparticle, which can be used for predicting the composition of the NP-protein corona. The predicted ranking is in good agreement with known experimental data for protein adsorption on surfaces.

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Year:  2015        PMID: 26723623     DOI: 10.1063/1.4936908

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  19 in total

1.  Exploring Protein-Nanoparticle Interactions with Coarse-Grained Protein Folding Models.

Authors:  Shuai Wei; Logan S Ahlstrom; Charles L Brooks
Journal:  Small       Date:  2017-03-07       Impact factor: 13.281

2.  Nano- and microparticles at fluid and biological interfaces.

Authors:  S Dasgupta; T Auth; G Gompper
Journal:  J Phys Condens Matter       Date:  2017-06-13       Impact factor: 2.333

3.  A hard-sphere model of protein corona formation on spherical and cylindrical nanoparticles.

Authors:  Ian Rouse; Vladimir Lobaskin
Journal:  Biophys J       Date:  2021-09-08       Impact factor: 3.699

4.  Protein adsorption on nanoparticles: model development using computer simulation.

Authors:  Qing Shao; Carol K Hall
Journal:  J Phys Condens Matter       Date:  2016-08-22       Impact factor: 2.333

Review 5.  Molecular Modeling of Protein Corona Formation and Its Interactions with Nanoparticles and Cell Membranes for Nanomedicine Applications.

Authors:  Hwankyu Lee
Journal:  Pharmaceutics       Date:  2021-04-29       Impact factor: 6.321

6.  Regimes of Biomolecular Ultrasmall Nanoparticle Interactions.

Authors:  Luca Boselli; Ester Polo; Valentina Castagnola; Kenneth A Dawson
Journal:  Angew Chem Int Ed Engl       Date:  2017-03-15       Impact factor: 15.336

Review 7.  Nanoparticle-Cell Interactions: Relevance for Public Health.

Authors:  Sabiha Runa; Michael Hussey; Christine K Payne
Journal:  J Phys Chem B       Date:  2017-11-21       Impact factor: 2.991

8.  Role of Ligand Conformation on Nanoparticle-Protein Interactions.

Authors:  Federica Simonelli; Giulia Rossi; Luca Monticelli
Journal:  J Phys Chem B       Date:  2019-02-14       Impact factor: 2.991

9.  Mathematical modeling in cancer nanomedicine: a review.

Authors:  Prashant Dogra; Joseph D Butner; Yao-Li Chuang; Sergio Caserta; Shreya Goel; C Jeffrey Brinker; Vittorio Cristini; Zhihui Wang
Journal:  Biomed Microdevices       Date:  2019-04-04       Impact factor: 2.838

10.  Low-Resolution Models for the Interaction Dynamics of Coated Gold Nanoparticles with β2-microglobulin.

Authors:  Giorgia Brancolini; Hender Lopez; Stefano Corni; Valentina Tozzini
Journal:  Int J Mol Sci       Date:  2019-08-08       Impact factor: 5.923

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