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Literature DB >> 2671649

Cloning and nucleotide sequence of the Salmonella typhimurium LT2 gnd gene and its homology with the corresponding sequence of Escherichia coli K12.

Abstract

The complete nucleotide sequence of the Salmonella strain LT2 gnd gene for 6-phosphogluconate dehydrogenase was determined. The gene contains 1404 bases and encodes a 468 amino acid polypeptide, which is the same as for Escherichia coli K12. The DNA sequence shows 14.8% difference between the two and the amino acid sequence 3.6% difference. Changes are mostly in the third codon base and most of the amino acid changes are conservative.

Entities: Gene Species

Mesh：

Substances：

Year: 1989 PMID： 2671649 DOI： 10.1007/bf00330960

Source DB: PubMed Journal: Mol Gen Genet ISSN： 0026-8925

12 in total

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Authors: H N Brahmbhatt; N B Quigley; P R Reeves
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2. MBIS--an integrated system for the retrieval and analyses of sequence data from nucleic acids and proteins.

Authors: C A Bucholtz; A H Reisner
Journal: Nucleic Acids Res Date: 1986-01-10 Impact factor: 16.971

3. The codon Adaptation Index--a measure of directional synonymous codon usage bias, and its potential applications.

Authors: P M Sharp; W H Li
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4. Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes.

Authors: T Ikemura
Journal: J Mol Biol Date: 1981-02-15 Impact factor: 5.469

5. The rate of synonymous substitution in enterobacterial genes is inversely related to codon usage bias.

Authors: P M Sharp; W H Li
Journal: Mol Biol Evol Date: 1987-05 Impact factor: 16.240

6. Rapid and efficient cosmid cloning.

Authors: D Ish-Horowicz; J F Burke
Journal: Nucleic Acids Res Date: 1981-07-10 Impact factor: 16.971

7. The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers.

Authors: J Vieira; J Messing
Journal: Gene Date: 1982-10 Impact factor: 3.688

8. DNA sequence of the Escherichia coli gene, gnd, for 6-phosphogluconate dehydrogenase.

Authors: M S Nasoff; H V Baker; R E Wolf
Journal: Gene Date: 1984-03 Impact factor: 3.688

9. Comparative nucleotide sequence analysis of growth-rate-regulated gnd alleles from natural isolates of Escherichia coli and from Salmonella typhimurium LT-2.

Authors: G J Barcak; R E Wolf
Journal: J Bacteriol Date: 1988-01 Impact factor: 3.490

10. Evolution in bacteria: evidence for a universal substitution rate in cellular genomes.

Authors: H Ochman; A C Wilson
Journal: J Mol Evol Date: 1987 Impact factor: 2.395

8 in total

1. New nucleotide sequence data on the EMBL File Server.

Authors:
Journal: Nucleic Acids Res Date: 1990-01-11 Impact factor: 16.971

2. Nucleotide sequences of the gnd genes from nine natural isolates of Escherichia coli: evidence of intragenic recombination as a contributing factor in the evolution of the polymorphic gnd locus.

Authors: M Bisercić; J Y Feutrier; P R Reeves
Journal: J Bacteriol Date: 1991-06 Impact factor: 3.490

Review 3. Determinants of DNA sequence divergence between Escherichia coli and Salmonella typhimurium: codon usage, map position, and concerted evolution.

Authors: P M Sharp
Journal: J Mol Evol Date: 1991-07 Impact factor: 2.395

4. Nucleotide sequences of the genes regulating O-polysaccharide antigen chain length (rol) from Escherichia coli and Salmonella typhimurium: protein homology and functional complementation.

Authors: R A Batchelor; P Alifano; E Biffali; S I Hull; R A Hull
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8. Molecular phylogeny of the salmonellae: relationships among Salmonella species and subspecies determined from four housekeeping genes and evidence of lateral gene transfer events.

Authors: J R McQuiston; S Herrera-Leon; B C Wertheim; J Doyle; P I Fields; R V Tauxe; J M Logsdon
Journal: J Bacteriol Date: 2008-08-29 Impact factor: 3.490