Literature DB >> 26713184

Real-time GPU-accelerated processing and volumetric display for wide-field laser-scanning optical-resolution photoacoustic microscopy.

Heesung Kang1, Sang-Won Lee2, Eun-Soo Lee3, Se-Hwa Kim4, Tae Geol Lee5.   

Abstract

Fast signal processing and real-time displays are essential for practical imaging modality in various fields of applications. However, the imaging speed in optical-resolution photoacoustic microscopy (OR-PAM), in particular, depends on factors such as the pulse repetition rate of the laser, scanning method, field of view (FOV), and signal processing time. In the past, efforts to increase acquisition speed either focused on developing new scanning methods or using lasers with higher pulse repetition rates. However, high-speed signal processing is also important for real-time volumetric display in OR-PAM. In this study, we carried out parallel signal processing using a graphics processing unit (GPU) to enable fast signal processing and wide-field real-time displays in laser-scanning OR-PAM. The average total GPU processing time for a B-mode PAM image was approximately 1.35 ms at a display speed of 480 fps when the data samples were acquired with 736 (axial) × 500 (lateral) points/B-mode-frame at a pulse repetition rate of 300 kHz. In addition, we successfully displayed maximum amplitude projection images of a mouse's ear as volumetric images with an FOV of 3 mm × 3 mm (500 × 500 pixels) at 1.02 s, corresponding to 0.98 fps.

Entities:  

Keywords:  (110.5120) Photoacoustic imaging; (170.3880) Medical and biological imaging; (170.5120) Photoacoustic imaging; (170.5810) Scanning microscopy; (180.5810) Scanning microscopy

Year:  2015        PMID: 26713184      PMCID: PMC4679244          DOI: 10.1364/BOE.6.004650

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  21 in total

1.  Real-time digital holographic microscopy using the graphic processing unit.

Authors:  Tomoyoshi Shimobaba; Yoshikuni Sato; Junya Miura; Mai Takenouchi; Tomoyoshi Ito
Journal:  Opt Express       Date:  2008-08-04       Impact factor: 3.894

2.  Real-time photoacoustic and ultrasound dual-modality imaging system facilitated with graphics processing unit and code parallel optimization.

Authors:  Jie Yuan; Guan Xu; Yao Yu; Yu Zhou; Paul L Carson; Xueding Wang; Xiaojun Liu
Journal:  J Biomed Opt       Date:  2013-08       Impact factor: 3.170

3.  Real-time display on Fourier domain optical coherence tomography system using a graphics processing unit.

Authors:  Yuuki Watanabe; Toshiki Itagaki
Journal:  J Biomed Opt       Date:  2009 Nov-Dec       Impact factor: 3.170

4.  Fast voice-coil scanning optical-resolution photoacoustic microscopy.

Authors:  Lidai Wang; Konstantin Maslov; Junjie Yao; Bin Rao; Lihong V Wang
Journal:  Opt Lett       Date:  2011-01-15       Impact factor: 3.776

5.  Wide-field fast-scanning photoacoustic microscopy based on a water-immersible MEMS scanning mirror.

Authors:  Junjie Yao; Chih-Hsien Huang; Lidai Wang; Joon-Mo Yang; Liang Gao; Konstantin I Maslov; Jun Zou; Lihong V Wang
Journal:  J Biomed Opt       Date:  2012-08       Impact factor: 3.170

6.  Three-dimensional photoacoustic tomography based on graphics-processing-unit-accelerated finite element method.

Authors:  Kuan Peng; Ling He; Ziqiang Zhu; Jingtian Tang; Jiaying Xiao
Journal:  Appl Opt       Date:  2013-12-01       Impact factor: 1.980

7.  High-speed label-free functional photoacoustic microscopy of mouse brain in action.

Authors:  Junjie Yao; Lidai Wang; Joon-Mo Yang; Konstantin I Maslov; Terence T W Wong; Lei Li; Chih-Hsien Huang; Jun Zou; Lihong V Wang
Journal:  Nat Methods       Date:  2015-03-30       Impact factor: 28.547

8.  Robust adaptive 3-D segmentation of vessel laminae from fluorescence confocal microscope images and parallel GPU implementation.

Authors:  Arunachalam Narayanaswamy; Saritha Dwarakapuram; Christopher S Bjornsson; Barbara M Cutler; William Shain; Badrinath Roysam
Journal:  IEEE Trans Med Imaging       Date:  2010-03       Impact factor: 10.048

9.  In vivo dynamic process imaging using real-time optical-resolution photoacoustic microscopy.

Authors:  Wei Shi; Peng Shao; Parsin Hajireza; Alexander Forbrich; Roger J Zemp
Journal:  J Biomed Opt       Date:  2013-02       Impact factor: 3.170

10.  In-vivo photoacoustic microscopy of nanoshell extravasation from solid tumor vasculature.

Authors:  Meng-Lin Li; James Chunjay Wang; Jon A Schwartz; Kelly L Gill-Sharp; George Stoica; Lihong V Wang
Journal:  J Biomed Opt       Date:  2009 Jan-Feb       Impact factor: 3.170

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  5 in total

1.  Autofocus method for automated microscopy using embedded GPUs.

Authors:  J M Castillo-Secilla; M Saval-Calvo; L Medina-Valdès; S Cuenca-Asensi; A Martínez-Álvarez; C Sánchez; G Cristóbal
Journal:  Biomed Opt Express       Date:  2017-02-22       Impact factor: 3.732

2.  Large area laser scanning optical resolution photoacoustic microscopy using a fibre optic sensor.

Authors:  Thomas J Allen; Olumide Ogunlade; Edward Zhang; Paul C Beard
Journal:  Biomed Opt Express       Date:  2018-01-18       Impact factor: 3.732

Review 3.  Review on practical photoacoustic microscopy.

Authors:  Seungwan Jeon; Jongbeom Kim; Donghyun Lee; Jin Woo Baik; Chulhong Kim
Journal:  Photoacoustics       Date:  2019-08-09

4.  Parallel Computing for Quantitative Blood Flow Imaging in Photoacoustic Microscopy.

Authors:  Zhiqiang Xu; Yiming Wang; Naidi Sun; Zhengying Li; Song Hu; Quan Liu
Journal:  Sensors (Basel)       Date:  2019-09-16       Impact factor: 3.576

5.  Optimizing photoacoustic image reconstruction using cross-platform parallel computation.

Authors:  Tri Vu; Yuehang Wang; Jun Xia
Journal:  Vis Comput Ind Biomed Art       Date:  2018-09-05
  5 in total

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