Literature DB >> 26711960

Deterministic transfection drives efficient nonviral reprogramming and uncovers reprogramming barriers.

Daniel Gallego-Perez1, Jose J Otero2, Catherine Czeisler3, Junyu Ma4, Cristina Ortiz3, Patrick Gygli3, Fay Patsy Catacutan3, Hamza Numan Gokozan3, Aaron Cowgill3, Thomas Sherwood5, Subhadip Ghatak6, Veysi Malkoc4, Xi Zhao4, Wei-Ching Liao4, Surya Gnyawali6, Xinmei Wang4, Andrew F Adler7, Kam Leong7, Brian Wulff3, Traci A Wilgus3, Candice Askwith5, Savita Khanna6, Cameron Rink6, Chandan K Sen8, L James Lee9.   

Abstract

Safety concerns and/or the stochastic nature of current transduction approaches have hampered nuclear reprogramming's clinical translation. We report a novel non-viral nanotechnology-based platform permitting deterministic large-scale transfection with single-cell resolution. The superior capabilities of our technology are demonstrated by modification of the well-established direct neuronal reprogramming paradigm using overexpression of the transcription factors Brn2, Ascl1, and Myt1l (BAM). Reprogramming efficiencies were comparable to viral methodologies (up to ~9-12%) without the constraints of capsid size and with the ability to control plasmid dosage, in addition to showing superior performance relative to existing non-viral methods. Furthermore, increased neuronal complexity could be tailored by varying BAM ratio and by including additional proneural genes to the BAM cocktail. Furthermore, high-throughput NEP allowed easy interrogation of the reprogramming process. We discovered that BAM-mediated reprogramming is regulated by AsclI dosage, the S-phase cyclin CCNA2, and that some induced neurons passed through a nestin-positive cell stage. FROM THE CLINICAL EDITOR: In the field of regenerative medicine, the ability to direct cell fate by nuclear reprogramming is an important facet in terms of clinical application. In this article, the authors described their novel technique of cell reprogramming through overexpression of the transcription factors Brn2, Ascl1, and Myt1l (BAM) by in situ electroporation through nanochannels. This new technique could provide a platform for further future designs.
Copyright © 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Induced neuron; Nanochannel electroporation; Nuclear reprogramming; Transfection

Mesh:

Substances:

Year:  2015        PMID: 26711960      PMCID: PMC5161095          DOI: 10.1016/j.nano.2015.11.015

Source DB:  PubMed          Journal:  Nanomedicine        ISSN: 1549-9634            Impact factor:   5.307


  29 in total

1.  A novel function of the proneural factor Ascl1 in progenitor proliferation identified by genome-wide characterization of its targets.

Authors:  Diogo S Castro; Ben Martynoga; Carlos Parras; Vidya Ramesh; Emilie Pacary; Caroline Johnston; Daniela Drechsel; Mélanie Lebel-Potter; Laura Galinanes Garcia; Charles Hunt; Dirk Dolle; Angela Bithell; Laurence Ettwiller; Noel Buckley; François Guillemot
Journal:  Genes Dev       Date:  2011-05-01       Impact factor: 11.361

2.  Intracellular tracking of single native molecules with electroporation-delivered quantum dots.

Authors:  Chen Sun; Zhenning Cao; Min Wu; Chang Lu
Journal:  Anal Chem       Date:  2014-11-06       Impact factor: 6.986

3.  Radical acceleration of nuclear reprogramming by chromatin remodeling with the transactivation domain of MyoD.

Authors:  Hiroyuki Hirai; Tetsuya Tani; Nobuko Katoku-Kikyo; Steven Kellner; Peter Karian; Meri Firpo; Nobuaki Kikyo
Journal:  Stem Cells       Date:  2011-09       Impact factor: 6.277

4.  Spatial and temporal expression pattern of Runx3 (Aml2) and Runx1 (Aml1) indicates non-redundant functions during mouse embryogenesis.

Authors:  D Levanon; O Brenner; V Negreanu; D Bettoun; E Woolf; R Eilam; J Lotem; U Gat; F Otto; N Speck; Y Groner
Journal:  Mech Dev       Date:  2001-12       Impact factor: 1.882

5.  A kinase inhibitor screen identifies small-molecule enhancers of reprogramming and iPS cell generation.

Authors:  Zhonghan Li; Tariq M Rana
Journal:  Nat Commun       Date:  2012       Impact factor: 14.919

6.  Electroporation-based delivery of cell-penetrating peptide conjugates of peptide nucleic acids for antisense inhibition of intracellular bacteria.

Authors:  Sai Ma; Betsy Schroeder; Chen Sun; Despina Nelie Loufakis; Zhenning Cao; Nammalwar Sriranganathan; Chang Lu
Journal:  Integr Biol (Camb)       Date:  2014-10       Impact factor: 2.192

7.  Hierarchical mechanisms for direct reprogramming of fibroblasts to neurons.

Authors:  Orly L Wapinski; Thomas Vierbuchen; Kun Qu; Qian Yi Lee; Soham Chanda; Daniel R Fuentes; Paul G Giresi; Yi Han Ng; Samuele Marro; Norma F Neff; Daniela Drechsel; Ben Martynoga; Diogo S Castro; Ashley E Webb; Thomas C Südhof; Anne Brunet; Francois Guillemot; Howard Y Chang; Marius Wernig
Journal:  Cell       Date:  2013-10-24       Impact factor: 41.582

8.  Direct cell reprogramming is a stochastic process amenable to acceleration.

Authors:  Jacob Hanna; Krishanu Saha; Bernardo Pando; Jeroen van Zon; Christopher J Lengner; Menno P Creyghton; Alexander van Oudenaarden; Rudolf Jaenisch
Journal:  Nature       Date:  2009-11-08       Impact factor: 49.962

9.  RNA-guided gene activation by CRISPR-Cas9-based transcription factors.

Authors:  Pablo Perez-Pinera; D Dewran Kocak; Christopher M Vockley; Andrew F Adler; Ami M Kabadi; Lauren R Polstein; Pratiksha I Thakore; Katherine A Glass; David G Ousterout; Kam W Leong; Farshid Guilak; Gregory E Crawford; Timothy E Reddy; Charles A Gersbach
Journal:  Nat Methods       Date:  2013-07-25       Impact factor: 28.547

10.  Small molecules enable neurogenin 2 to efficiently convert human fibroblasts into cholinergic neurons.

Authors:  Meng-Lu Liu; Tong Zang; Yuhua Zou; Joshua C Chang; Jay R Gibson; Kimberly M Huber; Chun-Li Zhang
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

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  17 in total

1.  Neurogenic tissue nanotransfection in the management of cutaneous diabetic polyneuropathy.

Authors:  Sashwati Roy; Chandan K Sen; Subhadip Ghatak; Natalia Higuita-Castro; Ravichand Palakurti; Nagajyothi Nalluri; Andrew Clark; Richard Stewart; Daniel Gallego-Perez; Daniel N Prater; Savita Khanna
Journal:  Nanomedicine       Date:  2020-05-16       Impact factor: 5.307

2.  Nanochannel-Based Poration Drives Benign and Effective Nonviral Gene Delivery to Peripheral Nerve Tissue.

Authors:  Jordan T Moore; Christopher G Wier; Luke R Lemmerman; Lilibeth Ortega-Pineda; Daniel J Dodd; William R Lawrence; Silvia Duarte-Sanmiguel; Kavya Dathathreya; Ludmila Diaz-Starokozheva; Hallie N Harris; Chandan K Sen; Ian L Valerio; Natalia Higuita-Castro; William David Arnold; Stephen J Kolb; Daniel Gallego-Perez
Journal:  Adv Biosyst       Date:  2020-09-16

3.  Topical tissue nano-transfection mediates non-viral stroma reprogramming and rescue.

Authors:  Daniel Gallego-Perez; Durba Pal; Subhadip Ghatak; Veysi Malkoc; Natalia Higuita-Castro; Surya Gnyawali; Lingqian Chang; Wei-Ching Liao; Junfeng Shi; Mithun Sinha; Kanhaiya Singh; Erin Steen; Alec Sunyecz; Richard Stewart; Jordan Moore; Thomas Ziebro; Robert G Northcutt; Michael Homsy; Paul Bertani; Wu Lu; Sashwati Roy; Savita Khanna; Cameron Rink; Vishnu Baba Sundaresan; Jose J Otero; L James Lee; Chandan K Sen
Journal:  Nat Nanotechnol       Date:  2017-08-07       Impact factor: 39.213

Review 4.  Nanotechnology-Driven Cell-Based Therapies in Regenerative Medicine.

Authors:  D Alzate-Correa; W R Lawrence; A Salazar-Puerta; N Higuita-Castro; D Gallego-Perez
Journal:  AAPS J       Date:  2022-03-15       Impact factor: 3.603

5.  Designer Extracellular Vesicles Modulate Pro-Neuronal Cell Responses and Improve Intracranial Retention.

Authors:  Lilibeth Ortega-Pineda; Alec Sunyecz; Ana I Salazar-Puerta; Maria Angelica Rincon-Benavides; Diego Alzate-Correa; Amrita Lakshmi Anaparthi; Elizabeth Guilfoyle; Louisa Mezache; Heather L Struckman; Silvia Duarte-Sanmiguel; Binbin Deng; David W McComb; Daniel J Dodd; William R Lawrence; Jordan Moore; Jingjing Zhang; Eduardo Reátegui; Rengasayee Veeraraghavan; M Tyler Nelson; Daniel Gallego-Perez; Natalia Higuita-Castro
Journal:  Adv Healthc Mater       Date:  2022-01-21       Impact factor: 11.092

Review 6.  Fabrication and use of silicon hollow-needle arrays to achieve tissue nanotransfection in mouse tissue in vivo.

Authors:  Yi Xuan; Subhadip Ghatak; Andrew Clark; Zhigang Li; Savita Khanna; Dongmin Pak; Mangilal Agarwal; Sashwati Roy; Peter Duda; Chandan K Sen
Journal:  Nat Protoc       Date:  2021-11-26       Impact factor: 17.021

Review 7.  Nanomedicine-Based Strategies for Diabetes: Diagnostics, Monitoring, and Treatment.

Authors:  Luke R Lemmerman; Devleena Das; Natalia Higuita-Castro; Raghavendra G Mirmira; Daniel Gallego-Perez
Journal:  Trends Endocrinol Metab       Date:  2020-03-04       Impact factor: 12.015

8.  On-Chip Clonal Analysis of Glioma-Stem-Cell Motility and Therapy Resistance.

Authors:  Daniel Gallego-Perez; Lingqian Chang; Junfeng Shi; Junyu Ma; Sung-Hak Kim; Xi Zhao; Veysi Malkoc; Xinmei Wang; Mutsuko Minata; Kwang J Kwak; Yun Wu; Gregory P Lafyatis; Wu Lu; Derek J Hansford; Ichiro Nakano; L James Lee
Journal:  Nano Lett       Date:  2016-08-10       Impact factor: 11.189

9.  Identification of Novel Cyclin A2 Binding Site and Nanomolar Inhibitors of Cyclin A2-CDK2 Complex.

Authors:  Stephanie S Kim; Michele J Alves; Patrick Gygli; Jose Otero; Steffen Lindert
Journal:  Curr Comput Aided Drug Des       Date:  2021       Impact factor: 1.606

10.  Early Intervention in Ischemic Tissue with Oxygen Nanocarriers Enables Successful Implementation of Restorative Cell Therapies.

Authors:  Ludmila Diaz-Starokozheva; Devleena Das; Xiangming Gu; Jordan T Moore; Luke R Lemmerman; Ian Valerio; Heather M Powell; Natalia Higuita-Castro; Michael R Go; Andre F Palmer; Daniel Gallego-Perez
Journal:  Cell Mol Bioeng       Date:  2020-05-29       Impact factor: 2.321

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