Literature DB >> 26707238

Decreased expression of long non-coding RNA GAS5 indicates a poor prognosis and promotes cell proliferation and invasion in hepatocellular carcinoma by regulating vimentin.

Lei Chang1, Cuicui Li2, Tian Lan1, Long Wu1, Yufeng Yuan1, Quanyan Liu1, Zhisu Liu1.   

Abstract

Hepatocellular carcinoma (HCC) is the third leading cause of cancer-related mortality worldwide. Recent studies have demonstrated that long non-coding RNAs (lncRNAs) are key in carcinogenesis. The aim of the present study was to investigate the role of lncRNA GAS5 in HCC tissues and to define the role of growth arrest-specific 5 (GAS5) in the regulation of hepatoma cell proliferation, invasion and apoptosis. Quantitative polymerase chain reaction and in situ hybridization were performed to investigate the expression of GAS5 in tumor tissues and corresponding adjacent tissues from 50 patients with HCC. Low expression of GAS5 was significantly correlated with differentiation (P<0.010) and portal vein tumor thrombosis (P=0.001). Multivariate analysis indicated that GAS5 expression was an independent predictor for overall survival (P=0.017). Further experiments demonstrated that overexpression of GAS5 significantly suppressed the proliferation and invasion of hepatoma cells in vitro. Overexpression of GAS5 significantly promoted the apoptosis of hepatoma cells. In addition, it was demonstrated that GAS5 negatively regulates vimentin expression in vitro and in vivo. Notably, vimentin knockdown promoted GAS5-pcDNA3.1-inhibition of hepatoma cell proliferation. In conclusion, the present study suggests an important role of GAS5 in the molecular etiology of HCC and suggests the potential application of GAS5 in HCC therapy.

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Year:  2015        PMID: 26707238      PMCID: PMC4732840          DOI: 10.3892/mmr.2015.4716

Source DB:  PubMed          Journal:  Mol Med Rep        ISSN: 1791-2997            Impact factor:   2.952


Introduction

Hepatocellular carcinoma (HCC) is the third leading cause of cancer-related mortality worldwide and the principal cause of fatality among patients with cirrhosis (1). Despite recent advances in cancer treatment with respect to surgery, chemotherapy and biologics, the majority of cases of HCC remain incurable once they have become metastatic and are associated with a poor prognosis. Hepatocarcinogenesis has often been described as a multistep process involving a number of genetic alterations, eventually leading to the malignant transformation of hepatocytes (2). The advances in suitable therapies for the purpose of increasing survival rate are limited as the pathophysiological mechanisms causing HCC have not been fully elucidated. Revealing the pathological mechanism underlying HCC development and progression is indispensable for developing effective therapeutic agents. The human transcriptome comprises not only large numbers of protein-coding messenger RNAs (mRNAs), but also a large set of non-protein coding transcripts that have structural, regulatory or unknown functions (3). Novel evidence shows that lncRNAs (long non-coding RNAs) exhibit important regulatory roles in tumorigenesis and cancer progression (4). For example, HOTAIR levels have been shown to be higher in tumor tissues than the adjacent normal tissue, and overexpression of HOTAIR correlates with the presence of metastasis. In addition, patients with high HOTAIR expression levels have been shown to have a poor prognosis (5). Forced expression of HOTAIR in cancer cells leads to altered histone H3 lysine27 methylation and gene expression, and increased metastasis (6). Maternally expressed gene 3 (MEG3) expression is markedly decreased in several primary human tumors and tumor cell lines by promoter hypermethylation (7). MEG3 is associated with meningioma progression by inducing the accumulation of p53 protein and selectively regulating p53 target gene expression. In addition, overexpression of MEG3 inhibits cancer cell proliferation and colony formation (8). The long noncoding RNA, small nucleolar RNA host gene-growth arrest-specific 5 (GAS5), was originally identified via subtractive cDNA cloning of genes which are preferentially expressed in growth-arrested cells (9). GAS5 comprises 12 exons and encodes ten box C/D within its introns (10). The open reading frame encoded within GAS5 exons is short and thought not to encode a functional protein. This, together with the presence of a conserved 5′-terminal oligopyrimidine tract (5′-TOP), explains why GAS5-a ncRNA accumulates upon growth arrest in a range of species (11). Several studies have implicated GAS5 ncRNA in other types of cancer (12,13). GAS5 and/or its snoRNAs have been shown to be aberrantly expressed in breast cancer, head and neck squamous cell carcinoma (14–16) and glioblastoma multiforme (17), where tumor expression is reduced, and non-small-cell lung cancer, where overexpression of the snoRNAs U44, U76 and U78 occurs (18). However, the mechanisms underlying GAS5 regulation of cancer cell proliferation in HCC remain unclear. Based on the above findings, the present study analyzed the expression of GAS5 in HCC tissues and adjacent normal tissues, and its effect on cell proliferation in HCC cells. It was demonstrated that GAS5 levels are significantly decreased in HCC tissues, and decreased expression of GAS5 indicates a poor prognosis in patients with HCC. In addition, GAS5 was shown to suppress hepatoma cell proliferation in a vimentin-dependent manner.

Materials and methods

Tissue samples, cell lines and clinical data collection

A total of 50 patients were analyzed in this study. The patients underwent HCC resection at the Department of General Surgery at the Zhongnan Hospital of Wuhan University (Wuhan, China) between February 2009 and March 2010. The study was approved by the ethics committee of Zhongnan Hospital of Wuhan University (Wuhan, China). Written informed consent was obtained from all patients. The diagnosis of HCC was histopathologically confirmed. No patients received preoperative treatment. Tumor and corresponding adjacent normal tissues were selected for each case. Normal human liver tissues were obtained >5 cm from the edge of the cancerous region. Resected tissue samples were immediately frozen in liquid nitrogen and stored at −80°C until RNA extraction, or fixed in 4% paraformaldehyde for paraffin sectioning. Clinicopathological data was collected for all subjects including details of age, gender and HCC features, such as tumor size, differentiation, hepatitis B virus (HBV) infection, liver cirrhosis, serum α-fetoprotein (AFP) levels, tumor number and the presence of portal vein tumor thrombus (PVTT). Patient follow up was performed by telephone interview and questionnaire every 3 months until April 30, 2015. Overall survival (OS) was calculated from the date of the initial surgery to the date of death. Patients who succumbed to diseases not directly related to HCC were excluded from the study. The following cell lines were used in this study: L02 normal human liver cells, and Huh7, Hep3B, HepG2, QGY-7701, MHCC97L and HCCLM9he human hepatoma cell lines. All cell lines were obtained from the Cell Bank of the Chinese Academy of Sciences (Shanghai, China), where they were characterized by mycoplasma detection, DNA fingerprinting, isozyme detection and determination of cell viability. All cells were cultured in the recommended media supplemented with 10% (v/v) fetal bovine serum (FBS; Thermo Fisher Scientific, Inc., Waltham, MA, USA), and 100 U/ml penicillin (Beyotime Institute of Biotechnology, Shanghai, China) and streptomycin (Beyotime Institute of Biotechnology) at 37°C in an incubator with a 5% CO2 atmosphere (Thermo Fisher Scientific, Inc.).

Ethics statement

Patient samples were collected and stored in the Zhongnan Hospital of Wuhan University tumor bank. Written informed consent was obtained from all of the patients. All procedures were approved by the Research Ethics Committee of Wuhan University. Patient data and samples were treated according to the ethical and legal standards adopted by the Declaration of Helsinki 2013.

RNA preparation, semiquantitative-reverse transcription and reverse transcription quantitative polymerase chain reaction (RT-qPCR)

The expression level of GAS5 was first examined by semiquantitative PCR in tissue from 6 patients with HCC. The expression of GAS5 was then analyzed by RT-qPCR in tissue from all 50 patients with HCC patients. Total RNA was extracted from tissues using TRIzol reagent (Invitrogen; Thermo Fisher Scientific Inc.) according to the manufacturer's protocol. Quantification of total RNA was performed with a Nanodrop™ spectrophotometer (Thermo Fisher Scientific Inc.) at 260 and 280 nm. Only samples with an A260/A280 ratio between 1.8 and 2.0 were utilized for further analysis. Total RNA (5 µg) was used to synthesize first-strand cDNA using random primers and SuperScript II reverse transcriptase (Invitrogen; Thermo Fisher Scientific Inc.) according to the manufacturer's protocol. The 20 µl RT reactions were performed using a PrimeScript RT reagent kit (Takara Bio Inc., Wuhan, China) and incubated for 30 min at 37°C and 5 sec at 85°C, and then maintained at 4°C for 1% agarose gel electrophoresis. For qPCR, 2 µl diluted RT products were combined with 10 µl of 2X SYBR Master mix (Toyobo Co., Ltd. Osaka, Japan), 1 µl forward and reverse primers (10 µM; Table I; Beijing View Solid Biotechnology (Beijing, China), and 6 µl nuclease-free water in a final volume of 20 µl according to the manufacturer's instructions. Amplification was performed with the iQ5 quantitative PCR system (Bio-Rad Laboratories Inc., Hercules, CA, USA), under the following conditions: 95°C for 30 sec, followed by 40 cycles at 95°C for 15 sec, and 60°C for 30 sec, and 72°C for 30 sec. qPCR was conducted in triplicate, including non-template controls. Amplification of the appropriate product was confirmed by melting curve analysis following amplification. Relative expression of GAS5 and vimentin were calculated using the comparative cycle quantification (Cq) (2−ΔΔCq) method (19) with β-actin as the endogenous control to normalize the data. PCR products were run on agarose gels to determine size, and dissociation curves were subsequently utilized to examine the specificity of the RT-qPCR assay.
Table I

DNA and RNA sequences of primers.

Primer nameSequence (5′-3′)bp
GAS5-FCAACTTGCCTGGACCAGCTT126
GAS5-RTCAAGCCGACTCTCCATACC
β-actin-FAGCGAGCATCCCCCAAAGTT285
β-actin-RGGGCACGAAGGCTCATCATT
Vimentin-FGCAGGAGGCAGAAGAATGGT140
Vimentin-RCCACTTCACAGGTGAGGGAC
E-cadherin-FCTTGCGGAAGTCAGTTCAGA216
E-cadherin-RCACCGTGAACGTGTAGCTCT
Vimentin-siRNA-FUCACGAUGACCUUGAAUAA
Vimentin-siRNA-RGAGGGAAACUAAUCUGGAU

GAS5, growth arrest-specific 5; F, forward; R, reverse; siRNA, small interering RNA.

In situ hybridization (ISH)

ISH was used to detect GAS5 in HCC clinical specimens. A digoxigenin-UTP-labeled antisense RNA probe (Beijing View Solid Biotechnology) was derived from 234 to 478 nt of GAS5 by in vitro transcription using the DIG RNA Labeling kit (Roche Diagnostics, Indianapolis, IN, USA). The digoxigenin-UTP labeled sense RNA probe derived from 234 to 478 nt of GAS5 was employed as a negative control. ISH was performed using the ISH kit (Boster Bio-Engineering Company, Wuhan, China). The ISH-staining regions were reviewed and scored by two pathologists, the score standard for the staining intensity was as follows: 0, negative; 1, weak; 2, medium; and 3, strong. The proportion of GAS5-positive cells was scored as: 0, 0%; 1, 1–25%; 2, 26–50%; 3, 51–75%; and 4, 76–100%. The total scores were calculated by combining two scores and ranged from 0 to 7. Total scores of ≥3 were defined as the high-expression group (positive group). This scoring method was simple and reproducible. Results were highly concordant between the two independent pathologists.

Immunohistochemistry

Vimentin and E-cadherin expression in primary tumor tissues and adjacent non-tumor tissues were examined using IHC. Paraffin-embedded blocks containing tumor tissues or non-tumor tissues and >70% primary tumor tissue were selected for IHC staining. Paraffin sections were cut to 4 µm, mounted on silanized slides and the preserved at 4°C. The paraffin sections were dewaxed, rehydrated and blocked with 0.3% H2O2. Tissue antigens were retrieved with a microwave oven at 95°C for 25 min and cooled to room temperature in 10 mmol sodium citrate buffer (pH 6.0). Each slide was washed with phosphate-buffered saline (PBS) and incubated overnight at 4°C with anti-vimentin (1:100, cat. no. 5741S, Cell Signaling Technologies, Inc.) or anti-E-cadherin (1:100, cat. no. 3195S, Cell Signaling Technologies, Inc.). Primary antibodies were diluted with background-reducing components (Dako, Glostrup, Denmark). Slides were then incubated with goat-anti-mouse IgG-horseradish peroxidase (HRP) (cat. no. BA1050; 1:5,000; Wuhan Boster Biological Technology, Ltd., Wuhan, China) or goat-anti-rabbit IgG-HRP (1:5,000; cat. no. BA1055; Wuhan Boster Biological Technology, Ltd.). Slides were stained for 2 min with diaminobenzidine tetrahydrochloride and then counterstained with hematoxylin. Tissue treated with antibody dilution solution was used as a negative control. All controls yielded satisfactory results. An FV1000 confocal laser-scanning microscope (Olympus, Tokyo, Japan) was used to examine the tissues. The total immunostaining score was calculated as the sum of the positive percentage and the staining intensity of the stained cells, which ranged from 0 to 6. The percent positivity was scored as follows: 0, 0–25%; 1, 26–50%; 2, 51–75%; and 3, ≥75%. The staining intensity was scored as: 0, no staining; 1, weakly stained; 2, moderately stained; and 3, strongly stained. The results of the immunohistochemical staining were scored by two experienced pathologists, who were blinded to the clinical data. A negative expression of protein was defined as a total score ≤3, and positive expression was defined as a total score ≥4.

Transfection assays

The GAS5 sequence (Gene-bank: NR_002578.2) was synthesized according to the full length GAS5 sequence (based on the GAS5 sequence) and then cloned into a pcDNA3.1 vector (Invitrogen; Thermo Fisher Scientific Inc.). The GAS5-pcDNA3.1 or empty vector was transfected into hepatoma cells. Transfection was conducted using LipJetTM in vitro DNA and siRNA Transfection kit (SignaGen Laboratories, Gaithersburg, MD, USA) according to the manufacturer's protocol. All transfections were performed using Lipofectamine 2000 reagent (Invitrogen; Thermo Fisher Scientific Inc.) according to the manufacturer's protocol. The empty pcDNA3.1 vector was used as the control. All transfection experiments were performed at least three times.

Fluorescent immunocytochemistry

Hepatoma cells were fixed with 4% paraformaldehyde [China Sinopharm International (Shanghai), Co., Ltd.] for 20 min and then permeabilized with 0.5% Triton X-100 [China Sinopharm International (Shanghai), Co., Ltd.] for 10 min. The fixed cells were blocked with 3% FBS for 30 min. For specific detection of vimentin protein (Cell Signaling Technologies, Inc., Boston, MA, USA), the cells were incubated with polyclonal rabbit anti-rat vimentin antibody (1:100, CST, USA) overnight at 4°C. The samples were incubated with Cy3-labeled goat anti-rabbit IgG (1:100, eBioscience, Inc., San Diego, CA, USA) in PBS for 1 h at 37°C. Then, the cells were washed twice with PBS and incubated with 4′, 6-diamidino-2-phenylindole (DAPI; BD Biosciences, La Jolla, CA, USA) for 5 min. The images were analyzed using fluorescence microscopy (Nikon Eclipse 80i, Tokyo, Japan). Identical illumination and camera settings were used within each dataset.

Cell proliferation assay

Cell proliferation assays were performed using Cell Counting kit-8 (Dojindo Molecular Technologies Inc., Kumamoto, Japan), according to the manufacturer's protocol. Human hepatoma cells were plated in 24-well plates in triplicate at a density of 2-5×104 cells per well and cultured in growth medium. Cells were then treated with pcDNA3.1, empty vector or vimentin-small interfering (si)RNA (Beijing View Solid Biotechnology) and the numbers of cells per well were measured by the (450 nm) at the indicated time points. The plasmid GAS5-pcDNA3.1 (Beijing View Solid Biotechnology) was constructed by introducing a KpnIXhoI fragment containing the GAS5 cDNA into the same sites in pcDNA3.1.

Bromodeoxyuridine (Brdu) assay

Hepatoma cells were fixed in 4% paraformaldehyde for 20 min, cells were then washed three times in PBS, dyed with BrdU (BD Biosciences) for 30 min, washed again in PBS three times, and treated with DAPI for 5 min. The images were analyzed using fluorescence microscopy (Nikon Eclipse 80i). Identical illumination and camera settings were used within each dataset.

Flow cytometric analysis

Hepatoma cells (2-5×105) treated with GAS5-pcDNA3.1 or negative control (NC) were plated in 6-well plates. After 48 h incubation the cells were harvested by trypsinization. The cultures were double stained with incubated with Annexin V and propidium iodide [China Sinopharm International (Shanghai), Co., Ltd.] for 30 min in the dark. Cultures were collected and analyzed for cell apoptosis using a flow cytometer (FACScan; BD Biosciences Franklin Lakes, NJ, USA) equipped with CellQuest 3.3 software. Cells were categorized as early apoptotic cells, late apoptotic cells, dead cells, or viable cells. The ratio of early apoptotic cells was compared with that in the controls from each experiment.

Cell invasion assays

After transfection for 24 h, cells in serum-free media were seeded into the upper chamber of a Transwell apparatus (BD Biosciences). for invasion assays with Matrigel (Sigma-Aldrich, St. Louis, MO, USA). The lower chambers were filled with media containing 10% FBS. After 24 h of incubation at 37°C in a 5% CO2 atmosphere, the cells which had invaded through the membrane were fixed in 4% paraformaldehyde and stained with 0.1% crystal violet (Sigma-Aldrich). The cells on the lower surface were photographed (Olympus; IX73) and three random fields were counted using a confocal laser-scanning microscope (Olympus FV1000). Three independent experiments were performed.

Western blot analysis

Western blot analysis to assess vimentin and E-cadherin protein expression was performed as previously described (20). Glyceraldehyde 3-phosphate dehydrogenase served as a control. Mouse monoclonal anti-GAPDH (cat. no. KM9002; 1:5,000; Sungene, Tianjin, China), rabbit monoclonal anti-vimentin (cat. no. 5741S; 1:1,000; Cell Signaling Technology, Inc.) and rabbit monoclonal E-cadherin (cat. no. 3195S; 1:1,000; Cell Signaling Technology, Inc.) primary antibodies were used. Goat anti-mouse IgG-HRP (cat. no. BA1050; 1:5,000; Boster Bio-Engineering Company) and goat anti-rabbit IgG-HRP (cat. no. BA1055; 1:5,000, Boster Bio-Engineering Company).

Statistical analysis

All statistical analyses were performed using SPSS software (SPSS, Inc., Chicago, IL, USA). The differences between groups were tested using Student's t-test. Survival curves were calculated using Kaplan-Meier and log-rank tests. The effects of variables on survival were determined by univariate and multivariate Cox proportional hazards modeling. The correlation between GAS5 and vimentin was analyzed by Spearman's rank correlation. Two-sided P-values were calculated. P<0.05 was considered to indicate a statistically significant difference.

Results

GAS5 is significantly downregulated in HCC tissues and hepatoma cells

To investigate whether GAS5 regulates hepatocarcinogenesis, the expression level of GAS5 was examined in HCC and adjacent normal tissues (Fig. 1). The expression level of GAS5 was first examined by semiquantitative RT-PCR in tissue from 6 patients with HCC. GAS5 was downregulated in HCC tissues compared with adjacent non-tumor tissues (Fig. 1C). The expression of GAS5 was then investigated by RT-qPCR in tissue from all 50 patients with HCC. Fig. 1A showed significantly lower GAS5 expression in HCC tissues. Fig. 1A and C show that GAS5 is significantly downregulated in HCC tissues compared with adjacent normal tissues. The mean value of GAS5 expression in normal tissues was 40.74 but the mean value of GAS5 expression in HCC tissues is 17.35. GAS5 expression levels were also assessed in hepatoma cells, as shown in Fig. 1B, GAS5 was observed to be downregulated in hepatoma cells compared with normal liver cells. An ISH assay (Fig. 1D) further confirmed that GAS5 was significantly downregulated in HCC tissues compared with adjacent normal tissues.
Figure 1

Analysis of GAS5 expression in HCC tissues and hepatoma cells. (A) Relative expression of GAS5 in HCC tissues (n=50) compared with adjacent normal tissues (n=50). GAS5 expression was examined by RT-qPCR and normalized to β-actin expression. (B) GAS5 expression levels were determined by RT-qPCR in human hepatoma cell lines (Huh7, Hep3B, HepG2, QGY-7701 and HCCLM9) and the normal human liver cell line (L02). Data are presented as the mean ± standard error of the mean (n=3). *P<0.05, compared with L02. (C) Semiquantitative RT-PCR of GAS5 expression in six representative human HCC tissues and adjacent normal tissues. The expression of β-actin is also shown as a control. (D) Representative images of GAS5 expression in human HCC tissues and adjacent normal by in situ hybridization assays. GAS5, growth arrest-specific 5; HCC, hepatocellular carcinoma; RT-qPCR, reverse transcription-quantitative polymerase chain reaction; NT, non-tumor; T, tumor.

GAS5 expression and clinicopathological factors in HCC

As shown in Table II, in order to assess the correlation between GAS5 expression and clinicopathological data, tumor tissues were divided into the low-expression group (mean expression value 1.24, n=25) and the high-expression group (mean expression value 33.45, n=25), based on the mean expression level of all tumor tissues (mean expression value, 2.98). Clinicopathological factors were analyzed in the high and low GAS5 expression groups. The patients with low GAS5 (n=25) exhibited a poorer histologic grade (P<0.010) and increased presence of PVTT (P=0.001) than the high GAS5 expression group (n=25). However, there was no significant correlation between GAS5 expression and other clinicopathologic features, such as age, gender, HBV infection, liver cirrhosis, serum AFP and tumor number (P>0.05).
Table II

Correlation between GAS5 expression and clinicopathologic parameters of HCC.

ParameterNumber of casesGAS5 expression
P-value
Low (n=25)High (n=25)
Age (years)0.869
 ≥65321715
 <6518810
Gender0.747
 Male371819
 Female1376
Tumor size (cm)0.774
 ≥5291514
 <5211011
Tumor differentiation<0.010
 Well or moderate24519
 Poor26206
HBV infection0.239
 Yes321418
 No18117
Liver cirrhosis0.569
 Yes221012
 No281513
Serum AFP (µg/l)0.544
 ≥400341618
 <4001697
Tumor number0.157
 Singular402218
 Multifocal1037
PVTT0.001
 Yes15132
 No351223

GAS5, growth arrest-specific 5; HBV, hepatitis B virus; AFP, α-fetoprotein; PVTT, portal vein tumor thrombus.

Low expression of GAS5 indicates a poor prognosis in HCC

To determine the factors responsible for patient survival, univariate and multivariate analysis were performed. GAS5 expression levels were obtained from the RT-qPCR data of the cohort of 50 patients mentioned above. Univariate analysis of overall survival revealed that GAS5 expression (P=0.000), PVTT (P=0.008), and differentiation (P=0.003) were prognostic indicators (Table III). Multivariate analysis showed that GAS5 expression was an independent prognostic indicator for overall survival (P<0.001; Fig. 2A). No significant associations were found with age, gender, HBV infection, liver cirrhosis, serum AFP and tumor number (Table III). Furthermore, high expression of GAS5 was found to be associated with lower rates of OS (P=0.017; log-rank test; Fig. 2B). However, no significant associations were found between OS and age, gender, HBV infection, liver cirrhosis, serum AFP and tumor number.
Table III

Univariate and multivariate analysis using the Cox proportional hazard regression model for overall survival.

VariableUnivariate(P-value)Multivariate(P-value)
Age0.943
Gender0.574
Tumor size0.891
Histologic grade0.0030.023
HBV infection0.121
Liver cirrhosis0.385
Serum AFP0.270
Tumor number0.476
PVTT0.0080.031
GAS5 expression0.000<0.001

HBV, hepatitis B virus; AFP, α-fetoprotein; PVTT, portal vein tumor thrombus; GAS5, growth arrest-specific 5.

Figure 2

lncRNA GAS5 is an independent prognostic factor to predict overall survival. (A) Multivariate analysis of HRs for overall survival is shown. HRs are presented as the means (95% CI). (B) Kaplan-Meier curves displaying overall survival of patients with high GAS5 expression (n=25) vs. low GAS5 expression (n=25) (P=0.017), using a long-rank test. Variables included in the multivariate analysis were selected using a univariate analysis. lncRNA, long non-coding RNA; GAS5, growth arrest-specific 5; HR, hazard ration; CI, confidence interval; PVTT, portal vein tumor thrombus.

GAS5 regulates cell apoptosis and cell proliferation in vitro

To investigate the role of GAS5 in the regulation of cell proliferation, cell apoptosis and the ability of cell invasion, the hepatoma cells were treated with GAS5-pcDNA3.1. RT-qPCR was used to observe the expression of GAS5 (Fig. 3A). Overexpression of GAS5 inhibited HCCLM9 proliferation (Fig. 3B and C) and promoted HCCLM9 apoptosis (Fig. 3D and E). In addition, overexpression of GAS5 suppressed the invasion ability of HCCLM9 (Fig. 3F and G). The above data demonstrated that GAS5 is key in hepatocarcinogenesis.
Figure 3

Effect of GAS5 on hepatoma cell growth, invasion and apoptosis in vitro. (A) The relative expression level of GAS5 in HCCLM9 cells, transfected with empty vector or GAS5-pcDNA3.1, was tested by reverse transcription-quantitative polymerase chain reaction. (B) At 48 h after transfection, a cell counting kit-8 assay was performed to determine the proliferation of HCCLM9 cells. (C) At 48 h after transfection, a Brdu assay indicated that overexpression of GAS5 inhibited HCCLM9 proliferation (magnification, ×400). (D and E) At 48 h after transfection, cell apoptosis of HCCLM9 was analyzed by flow cytometry. (F and G) At 48 h after transfection a cell invasion assay was performed to investigate the ability of invasion of HCCLM9. The results show data from at least three independent experiments, expressed as the mean ± standard deviation. *P<0.05. NC, negative control; GAS5, growth-arrest specific 5; Brdu, bromodeoxyuridine; N.S. not significant.

Expression of vimentin and E-cadherin in HCC

Epithelial-mesenchymal transition (EMT) has been shown to be of critical importance in the early events of tumor cell metastatic dissemination as cells become more motile and acquire invasive potential (21). It was previously found that GAS5 suppressed the invasion ability of tumor cells. Thus, the present study determined the expression of vimentin and E-cadherin (marker protein of EMT) (22). As shown in Fig. 4A, immunohistochemistry indicated that vimentin was significantly upregulated in tumor tissues, while E-cadherin was downregulated in tumor tissues. In addition, RT-qPCR confirmed the above phenomenon (Fig. 4B).
Figure 4

GAS5 negatively regulates vimentin expression. (A) Analysis of the vimentin and E-cadherin levels was conducted by immunohistochemistry in HCC tissues and adjacent normal tissues (magnification, ×200). (B) Analysis of the vimentin mRNA level was performed in HCC tissues and adjacent normal tissues by RT-qPCR. (C) A negative correlation was observed between the GAS5 level and the vimentin mRNA level in HCC tissues (r2=0.6590, P<0.010). (D) Immunofluorescence showed the expression changes of vimentin and E-cadherin following GAS5 overexpression (Scale bar, 20 µm). (E) Western blot analysis and (F) RT-qPCR analysis of vimentin protein levels and mRNA levels in Huh7 and HCCLM9 cells following GAS5 overexpression. *P<0.05. GAS5, growth arrest-specific 5; NC, negative control; RT-qPCR, reverse transcription-quantitative polymerase chain reaction.

GAS5 negatively regulates vimentin expression in vitro

To investigate the correlation between GAS5 and vimentin, Spearman's rank correlation analysis was used. As shown in Fig. 4C a significant negative correlation is observed between the GAS5 levels and the vimentin levels in HCC tissues (r2=0.6590, P<0.01). In addition, fluorescent immunocytochemistry indicated that overexpression of GAS5 decreased vimentin expression and increased E-cadherin expression (Fig. 4D). Western blot analysis demonstrated that the vimentin protein level is downregulated and E-cadherin is upregulated in Huh7 and HCCLM9 after GAS5 overexpression (Fig. 4E). Figure 4F shows that overexpression of GAS5 significantly decreased the vimentin mRNA levels and increased E-cadherin mRNA in Huh7 and HCCLM9 cells. These data indicated that GAS5 regulates hepatoma cell proliferation and invasion by the regulation of vimentin.

GAS5 inhibits cell proliferation by regulating vimentin

GAS5 overexpression increased hepatoma cell proliferation and a significant negative correlation was observed between GAS5 and vimentin. Thus, it was hypothesized that the role of GAS5 in regulating hepatoma cell proliferation is mediated by vimentin. Figure 5A shows that vimentin knockdown partially strengthened the ability of GAS5-pcDNA3.1-inhibited cell proliferation in HCCLM9 cells. Vimentin inhibition also strengthened the ability of GAS5-pcDNA3.1-inhibited cell proliferation in Huh7 cells (Fig. 5B). These data confirmed that GAS5 suppressed hepatoma cell progression, at least in part, by regulating vimentin expression.
Figure 5

GAS5 overexpression inhibited hepatoma cell proliferation by regulating vimentin. (A) HCCLM9 cells and (B) Huh7 cells were treated with GAS5-pcDNA3.1 and vimentin-siRNA and the numbers of cells per well were measured using CCK8. *P<0.05 and **P<0.01. CCK8, cell counting kit-8; OD, optical density; NC, negative control; GAS5, growth arrest-specific 5; siRNA, small interfering RNA.

Discussion

In recent years, genome-wide surveys have revealed that 98% of the total human genome can be transcribed, including certain short or lncRNAs with numbered or no protein-coding capacity (23–25). Up to now, studies have identified a huge number of lncRNAs involved in the development and progress of human diseases, including cancer (21,26). LncRNAs can function as regulators of tumor suppressor or oncogene expression and may be one of the 'cutt' that lead to oncogenesis (27). To date, there is increasing evidence that suggests that certain lncRNAs can be identified as biomarkers for the prognosis of tumor therapeutic targets in human cancer (28). GAS5 is an lncRNA involved in the regulation of cell cycles. GAS5 is key in normal growth arrest in T-cell and non-transformed lymphocytes. GAS5 inhibition suppresses cell apoptosis and maintains a more rapid cell cycle, whereas GAS5 overexpression results in an increase in cell apoptosis and a reduction in the rate of progression through the cell cycle, revealing that GAS5 is required for normal growth arrest (14). Recently, studies have identified a novel role of GAS5 in the regulation of tumorigenesis (29). GAS5 was downregulated in a number of tumor types, such as breast cancer, head and renal cell carcinoma, prostate cancer, and glioblastoma (30–32). These observations indicate that GAS5 may function as a tumor suppressor in human tumor progression. However, the molecular mechanisms underlying GAS5 regulation of cancer cell proliferation in HCC remain unclear. EMT has been shown to be of critical importance in the early events of tumor cell metastatic dissemination during which cells become more motile and exhibit invasive potential (33). EMT is not just a mechanism that forms fibroblast-like cells; it is a process that results in cancer cell migration, invasion, and metastasis (34,35). Various biomarkers have been screened to indicate the EMT process, including the loss of E-cadherin, zona occludens-1 and cytokeratin, and the upregulation of matrix metalloproteinase, fibronectin, α-smooth muscle actin, vimentin, snail and slug (35). Vimentin is a 57 kDa, type III intermediate filament that is found in mesenchymal cells of various types of tissues during their developmental stages. Its function is to maintain cell and tissue integrity. Vimentin is associated with tumor invasion and a poor prognosis in a number of types of cancers, including breast cancer, prostate cancer, melanoma and lung cancer, and serves as a potential target for cancer therapy (36,37). The current study verified that the expression level of GAS5 is significantly downregulated in HCC tissues compared with adjacent normal controls. Decreased expression of GAS5 was associated closely with the tumor differentiation (P<0.010) and PVTT (P=0.001). The downregulated expression of GAS5 was associated with poor prognosis of HCC. GAS5 overexpression decreases hepatoma cell proliferation and invasion. In addition, GAS5 overexpression promotes the apoptosis of hepatoma cells. It was further demonstrated that GAS5 is involved in the EMT of HCC cells. Overexpression of GAS5 downgegulated the vimentin level and the upregulated E-cadherin level in hepatoma cells. A significant negative correlation was observed between GAS5 and the vimentin level in vivo. Notably, knockdown of vimentin partially increased GAS5-pcDNA3.1-induced inhibition of cell proliferation. These data suggest an important role of GAS5 in the molecular etiology of HCC and implicate the potential application of GAS5 in HCC therapy.
  36 in total

1.  Long noncoding RNA GAS5 suppresses the migration and invasion of hepatocellular carcinoma cells via miR-21.

Authors:  Litian Hu; Hua Ye; Guangming Huang; Fei Luo; Yawei Liu; Yi Liu; Xiaojun Yang; Jian Shen; Qizhan Liu; Jianping Zhang
Journal:  Tumour Biol       Date:  2015-09-24

2.  The eukaryotic genome as an RNA machine.

Authors:  Paulo P Amaral; Marcel E Dinger; Tim R Mercer; John S Mattick
Journal:  Science       Date:  2008-03-28       Impact factor: 47.728

Review 3.  Epithelial-mesenchymal transitions in development and disease.

Authors:  Jean Paul Thiery; Hervé Acloque; Ruby Y J Huang; M Angela Nieto
Journal:  Cell       Date:  2009-11-25       Impact factor: 41.582

Review 4.  Non-coding RNAs: regulators of disease.

Authors:  Ryan J Taft; Ken C Pang; Timothy R Mercer; Marcel Dinger; John S Mattick
Journal:  J Pathol       Date:  2010-01       Impact factor: 7.996

5.  Classification of gas5 as a multi-small-nucleolar-RNA (snoRNA) host gene and a member of the 5'-terminal oligopyrimidine gene family reveals common features of snoRNA host genes.

Authors:  C M Smith; J A Steitz
Journal:  Mol Cell Biol       Date:  1998-12       Impact factor: 4.272

6.  Long non-coding RNA GAS5 functions as a tumor suppressor in renal cell carcinoma.

Authors:  Hui-Ping Qiao; Wei-Shi Gao; Jian-Xin Huo; Zhan-Shan Yang
Journal:  Asian Pac J Cancer Prev       Date:  2013

7.  Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.

Authors:  Ewan Birney; John A Stamatoyannopoulos; Anindya Dutta; Roderic Guigó; Thomas R Gingeras; Elliott H Margulies; Zhiping Weng; Michael Snyder; Emmanouil T Dermitzakis; Robert E Thurman; Michael S Kuehn; Christopher M Taylor; Shane Neph; Christoph M Koch; Saurabh Asthana; Ankit Malhotra; Ivan Adzhubei; Jason A Greenbaum; Robert M Andrews; Paul Flicek; Patrick J Boyle; Hua Cao; Nigel P Carter; Gayle K Clelland; Sean Davis; Nathan Day; Pawandeep Dhami; Shane C Dillon; Michael O Dorschner; Heike Fiegler; Paul G Giresi; Jeff Goldy; Michael Hawrylycz; Andrew Haydock; Richard Humbert; Keith D James; Brett E Johnson; Ericka M Johnson; Tristan T Frum; Elizabeth R Rosenzweig; Neerja Karnani; Kirsten Lee; Gregory C Lefebvre; Patrick A Navas; Fidencio Neri; Stephen C J Parker; Peter J Sabo; Richard Sandstrom; Anthony Shafer; David Vetrie; Molly Weaver; Sarah Wilcox; Man Yu; Francis S Collins; Job Dekker; Jason D Lieb; Thomas D Tullius; Gregory E Crawford; Shamil Sunyaev; William S Noble; Ian Dunham; France Denoeud; Alexandre Reymond; Philipp Kapranov; Joel Rozowsky; Deyou Zheng; Robert Castelo; Adam Frankish; Jennifer Harrow; Srinka Ghosh; Albin Sandelin; Ivo L Hofacker; Robert Baertsch; Damian Keefe; Sujit Dike; Jill Cheng; Heather A Hirsch; Edward A Sekinger; Julien Lagarde; Josep F Abril; Atif Shahab; Christoph Flamm; Claudia Fried; Jörg Hackermüller; Jana Hertel; Manja Lindemeyer; Kristin Missal; Andrea Tanzer; Stefan Washietl; Jan Korbel; Olof Emanuelsson; Jakob S Pedersen; Nancy Holroyd; Ruth Taylor; David Swarbreck; Nicholas Matthews; Mark C Dickson; Daryl J Thomas; Matthew T Weirauch; James Gilbert; Jorg Drenkow; Ian Bell; XiaoDong Zhao; K G Srinivasan; Wing-Kin Sung; Hong Sain Ooi; Kuo Ping Chiu; Sylvain Foissac; Tyler Alioto; Michael Brent; Lior Pachter; Michael L Tress; Alfonso Valencia; Siew Woh Choo; Chiou Yu Choo; Catherine Ucla; Caroline Manzano; Carine Wyss; Evelyn Cheung; Taane G Clark; James B Brown; Madhavan Ganesh; Sandeep Patel; Hari Tammana; Jacqueline Chrast; Charlotte N Henrichsen; Chikatoshi Kai; Jun Kawai; Ugrappa Nagalakshmi; Jiaqian Wu; Zheng Lian; Jin Lian; Peter Newburger; Xueqing Zhang; Peter Bickel; John S Mattick; Piero Carninci; Yoshihide Hayashizaki; Sherman Weissman; Tim Hubbard; Richard M Myers; Jane Rogers; Peter F Stadler; Todd M Lowe; Chia-Lin Wei; Yijun Ruan; Kevin Struhl; Mark Gerstein; Stylianos E Antonarakis; Yutao Fu; Eric D Green; Ulaş Karaöz; Adam Siepel; James Taylor; Laura A Liefer; Kris A Wetterstrand; Peter J Good; Elise A Feingold; Mark S Guyer; Gregory M Cooper; George Asimenos; Colin N Dewey; Minmei Hou; Sergey Nikolaev; Juan I Montoya-Burgos; Ari Löytynoja; Simon Whelan; Fabio Pardi; Tim Massingham; Haiyan Huang; Nancy R Zhang; Ian Holmes; James C Mullikin; Abel Ureta-Vidal; Benedict Paten; Michael Seringhaus; Deanna Church; Kate Rosenbloom; W James Kent; Eric A Stone; Serafim Batzoglou; Nick Goldman; Ross C Hardison; David Haussler; Webb Miller; Arend Sidow; Nathan D Trinklein; Zhengdong D Zhang; Leah Barrera; Rhona Stuart; David C King; Adam Ameur; Stefan Enroth; Mark C Bieda; Jonghwan Kim; Akshay A Bhinge; Nan Jiang; Jun Liu; Fei Yao; Vinsensius B Vega; Charlie W H Lee; Patrick Ng; Atif Shahab; Annie Yang; Zarmik Moqtaderi; Zhou Zhu; Xiaoqin Xu; Sharon Squazzo; Matthew J Oberley; David Inman; Michael A Singer; Todd A Richmond; Kyle J Munn; Alvaro Rada-Iglesias; Ola Wallerman; Jan Komorowski; Joanna C Fowler; Phillippe Couttet; Alexander W Bruce; Oliver M Dovey; Peter D Ellis; Cordelia F Langford; David A Nix; Ghia Euskirchen; Stephen Hartman; Alexander E Urban; Peter Kraus; Sara Van Calcar; Nate Heintzman; Tae Hoon Kim; Kun Wang; Chunxu Qu; Gary Hon; Rosa Luna; Christopher K Glass; M Geoff Rosenfeld; Shelley Force Aldred; Sara J Cooper; Anason Halees; Jane M Lin; Hennady P Shulha; Xiaoling Zhang; Mousheng Xu; Jaafar N S Haidar; Yong Yu; Yijun Ruan; Vishwanath R Iyer; Roland D Green; Claes Wadelius; Peggy J Farnham; Bing Ren; Rachel A Harte; Angie S Hinrichs; Heather Trumbower; Hiram Clawson; Jennifer Hillman-Jackson; Ann S Zweig; Kayla Smith; Archana Thakkapallayil; Galt Barber; Robert M Kuhn; Donna Karolchik; Lluis Armengol; Christine P Bird; Paul I W de Bakker; Andrew D Kern; Nuria Lopez-Bigas; Joel D Martin; Barbara E Stranger; Abigail Woodroffe; Eugene Davydov; Antigone Dimas; Eduardo Eyras; Ingileif B Hallgrímsdóttir; Julian Huppert; Michael C Zody; Gonçalo R Abecasis; Xavier Estivill; Gerard G Bouffard; Xiaobin Guan; Nancy F Hansen; Jacquelyn R Idol; Valerie V B Maduro; Baishali Maskeri; Jennifer C McDowell; Morgan Park; Pamela J Thomas; Alice C Young; Robert W Blakesley; Donna M Muzny; Erica Sodergren; David A Wheeler; Kim C Worley; Huaiyang Jiang; George M Weinstock; Richard A Gibbs; Tina Graves; Robert Fulton; Elaine R Mardis; Richard K Wilson; Michele Clamp; James Cuff; Sante Gnerre; David B Jaffe; Jean L Chang; Kerstin Lindblad-Toh; Eric S Lander; Maxim Koriabine; Mikhail Nefedov; Kazutoyo Osoegawa; Yuko Yoshinaga; Baoli Zhu; Pieter J de Jong
Journal:  Nature       Date:  2007-06-14       Impact factor: 49.962

Review 8.  The basics of epithelial-mesenchymal transition.

Authors:  Raghu Kalluri; Robert A Weinberg
Journal:  J Clin Invest       Date:  2009-06       Impact factor: 14.808

Review 9.  The functional role of long non-coding RNA in human carcinomas.

Authors:  Ewan A Gibb; Carolyn J Brown; Wan L Lam
Journal:  Mol Cancer       Date:  2011-04-13       Impact factor: 27.401

10.  GAS5, a non-protein-coding RNA, controls apoptosis and is downregulated in breast cancer.

Authors:  M Mourtada-Maarabouni; M R Pickard; V L Hedge; F Farzaneh; G T Williams
Journal:  Oncogene       Date:  2008-10-06       Impact factor: 9.867

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  62 in total

1.  [Low expression of lncRNA-GAS5 promotes epithelial-mesenchymal transition of breast cancer cells in vitro].

Authors:  Yong-Xing Ding; Ke-Cai Duan; Su-Lian Chen
Journal:  Nan Fang Yi Ke Da Xue Xue Bao       Date:  2017-11-20

2.  Upregulation of lncRNA Sox2ot indicates a poor prognosis for patients with hepatocellular carcinoma and promotes cell invasion.

Authors:  Ji Sun; Xiaomou Wei; Li Xu
Journal:  Oncol Lett       Date:  2018-05-16       Impact factor: 2.967

3.  LncRNA GAS5 inhibits proliferation and progression of prostate cancer by targeting miR-103 through AKT/mTOR signaling pathway.

Authors:  Dong Xue; Cuixing Zhou; Hao Lu; Renfang Xu; Xianlin Xu; Xiaozhou He
Journal:  Tumour Biol       Date:  2016-10-14

4.  LINC00511 knockdown prevents cervical cancer cell proliferation and reduces resistance to paclitaxel.

Authors:  Ben-DI Mao; Ping Xu; Ping Xu; Yan Zhong; Wei-Wei Ding; Qing-Zhi Meng
Journal:  J Biosci       Date:  2019-06       Impact factor: 1.826

5.  Long non-coding RNA ZNF674-1 acts as a cancer suppressor in nasopharyngeal carcinoma.

Authors:  Guo-Hui Nie; Zhao Li; Hong-Fang Duan; Liang Luo; Hong-Yi Hu; Xiao-Fan Chen; Wei Zhang
Journal:  Oncol Lett       Date:  2018-04-19       Impact factor: 2.967

6.  Analysis of long non-coding RNA (lncRNA) expression in hepatitis B patients.

Authors:  Sunde Yılmaz Susluer; Cagla Kayabasi; Besra Ozmen Yelken; Aycan Asik; Didem Celik; Tugce Balci Okcanoglu; Suheyla Serin Senger; Cigir Biray Avci; Sukran Kose; Cumhur Gunduz
Journal:  Bosn J Basic Med Sci       Date:  2018-05-20       Impact factor: 3.363

7.  Association of long non-coding RNA GAS5 and miR-21 levels in CD4+ T cells with clinical features of systemic lupus erythematosus.

Authors:  Qi-Feng Suo; Jun Sheng; Fu-Yong Qiang; Zong-Sheng Tang; Ying-Ying Yang
Journal:  Exp Ther Med       Date:  2017-11-01       Impact factor: 2.447

8.  LncDisease: a sequence based bioinformatics tool for predicting lncRNA-disease associations.

Authors:  Junyi Wang; Ruixia Ma; Wei Ma; Ji Chen; Jichun Yang; Yaguang Xi; Qinghua Cui
Journal:  Nucleic Acids Res       Date:  2016-02-16       Impact factor: 16.971

9.  Downregulation of long non-coding RNA GAS5 promotes cell proliferation, migration and invasion in esophageal squamous cell carcinoma.

Authors:  Ke Ke; Zhanwen Sun; Zhengjun Wang
Journal:  Oncol Lett       Date:  2018-05-24       Impact factor: 2.967

Review 10.  Long noncoding RNA network: Novel insight into hepatocellular carcinoma metastasis (Review).

Authors:  Xiuming Zhu; Hongming Pan; Lili Liu
Journal:  Int J Mol Med       Date:  2021-05-20       Impact factor: 4.101

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