Literature DB >> 26706451

The redundancy of the mammalian heterochromatic compartment.

Joan C Ritland Politz1, David Scalzo2, Mark Groudine3.   

Abstract

Two chromatin compartments are present in most mammalian cells; the first contains primarily euchromatic, early replicating chromatin and the second, primarily late-replicating heterochromatin, which is the subject of this review. Heterochromatin is concentrated in three intranuclear regions: the nuclear periphery, the perinucleolar space and in pericentromeric bodies. We review recent evidence demonstrating that the heterochromatic compartment is critically involved in global nuclear organization and the maintenance of genome stability, and discuss models regarding how this compartment is formed and maintained. We also evaluate our understanding of how heterochromatic sequences (herein named heterochromatic associated regions (HADs)) might be tethered within these regions and review experiments that reveal the stochastic nature of individual HAD positioning within the compartment. These investigations suggest a substantial level of functional redundancy within the heterochromatic compartment.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 26706451      PMCID: PMC4911328          DOI: 10.1016/j.gde.2015.10.007

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  76 in total

1.  Correlative microscopy of individual cells: sequential application of microscopic systems with increasing resolution to study the nuclear landscape.

Authors:  Barbara Hübner; Thomas Cremer; Jürgen Neumann
Journal:  Methods Mol Biol       Date:  2013

2.  Ribosomal DNA contributes to global chromatin regulation.

Authors:  Silvana Paredes; Keith A Maggert
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-12       Impact factor: 11.205

Review 3.  Epigenetic control of RNA polymerase I transcription in mammalian cells.

Authors:  Ingrid Grummt; Gernot Längst
Journal:  Biochim Biophys Acta       Date:  2012-10-12

4.  Primate-specific endogenous retrovirus-driven transcription defines naive-like stem cells.

Authors:  Jichang Wang; Gangcai Xie; Manvendra Singh; Avazeh T Ghanbarian; Tamás Raskó; Attila Szvetnik; Huiqiang Cai; Daniel Besser; Alessandro Prigione; Nina V Fuchs; Gerald G Schumann; Wei Chen; Matthew C Lorincz; Zoltán Ivics; Laurence D Hurst; Zsuzsanna Izsvák
Journal:  Nature       Date:  2014-10-15       Impact factor: 49.962

5.  Inverse size scaling of the nucleolus by a concentration-dependent phase transition.

Authors:  Stephanie C Weber; Clifford P Brangwynne
Journal:  Curr Biol       Date:  2015-02-19       Impact factor: 10.834

6.  Histone H3.3 is required for endogenous retroviral element silencing in embryonic stem cells.

Authors:  Simon J Elsässer; Laura A Banaszynski; Kyung-Min Noh; Nichole Diaz; C David Allis
Journal:  Nature       Date:  2015-05-04       Impact factor: 49.962

7.  Heterochromatin establishment at pericentromeres depends on nuclear position.

Authors:  Joanna W Jachowicz; Angèle Santenard; Ambre Bender; Julius Muller; Maria-Elena Torres-Padilla
Journal:  Genes Dev       Date:  2013-11-15       Impact factor: 11.361

8.  Directed targeting of chromatin to the nuclear lamina is mediated by chromatin state and A-type lamins.

Authors:  Jennifer C Harr; Teresa Romeo Luperchio; Xianrong Wong; Erez Cohen; Sarah J Wheelan; Karen L Reddy
Journal:  J Cell Biol       Date:  2015-01-05       Impact factor: 10.539

9.  Heterochromatin-associated interactions of Drosophila HP1a with dADD1, HIPP1, and repetitive RNAs.

Authors:  Artyom A Alekseyenko; Andrey A Gorchakov; Barry M Zee; Stephen M Fuchs; Peter V Kharchenko; Mitzi I Kuroda
Journal:  Genes Dev       Date:  2014-07-01       Impact factor: 11.361

10.  Nucleolar tethering mediates pairing between the IgH and Myc loci.

Authors:  Daniel E Strongin; Mark Groudine; Joan C Ritland Politz
Journal:  Nucleus       Date:  2014 Sep-Oct       Impact factor: 4.197

View more
  14 in total

1.  Ki-67 Contributes to Normal Cell Cycle Progression and Inactive X Heterochromatin in p21 Checkpoint-Proficient Human Cells.

Authors:  Xiaoming Sun; Aizhan Bizhanova; Timothy D Matheson; Jun Yu; Lihua Julie Zhu; Paul D Kaufman
Journal:  Mol Cell Biol       Date:  2017-08-11       Impact factor: 4.272

2.  Heterochromatic regions in Japanese quail chromosomes: comprehensive molecular-cytogenetic characterization and 3D mapping in interphase nucleus.

Authors:  Anna Zlotina; Antonina Maslova; Nadezda Kosyakova; Ahmed B Hamid Al-Rikabi; Thomas Liehr; Alla Krasikova
Journal:  Chromosome Res       Date:  2018-12-18       Impact factor: 5.239

Review 3.  Silencing of endogenous retroviruses by heterochromatin.

Authors:  Sophia Groh; Gunnar Schotta
Journal:  Cell Mol Life Sci       Date:  2017-02-03       Impact factor: 9.261

Review 4.  Lamina-Associated Domains: Links with Chromosome Architecture, Heterochromatin, and Gene Repression.

Authors:  Bas van Steensel; Andrew S Belmont
Journal:  Cell       Date:  2017-05-18       Impact factor: 41.582

Review 5.  Close to the edge: Heterochromatin at the nucleolar and nuclear peripheries.

Authors:  Aizhan Bizhanova; Paul D Kaufman
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2020-12-08       Impact factor: 4.490

6.  The p150N domain of chromatin assembly factor-1 regulates Ki-67 accumulation on the mitotic perichromosomal layer.

Authors:  Timothy D Matheson; Paul D Kaufman
Journal:  Mol Biol Cell       Date:  2016-11-02       Impact factor: 4.138

7.  Meiotic Nuclear Architecture in Distinct Mole Vole Hybrids with Robertsonian Translocations: Chromosome Chains, Stretched Centromeres, and Distorted Recombination.

Authors:  Sergey Matveevsky; Artemii Tretiakov; Anna Kashintsova; Irina Bakloushinskaya; Oxana Kolomiets
Journal:  Int J Mol Sci       Date:  2020-10-15       Impact factor: 5.923

Review 8.  Physiological and Pathological Aging Affects Chromatin Dynamics, Structure and Function at the Nuclear Edge.

Authors:  Jérôme D Robin; Frédérique Magdinier
Journal:  Front Genet       Date:  2016-08-23       Impact factor: 4.599

9.  Nucleolus association of chromosomal domains is largely maintained in cellular senescence despite massive nuclear reorganisation.

Authors:  Stefan Dillinger; Tobias Straub; Attila Németh
Journal:  PLoS One       Date:  2017-06-02       Impact factor: 3.240

Review 10.  Nuclear envelope dysfunction and its contribution to the aging process.

Authors:  Filipa Martins; Jéssica Sousa; Cátia D Pereira; Odete A B da Cruz E Silva; Sandra Rebelo
Journal:  Aging Cell       Date:  2020-04-15       Impact factor: 9.304

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.