Literature DB >> 26689639

One additional histone deacetylase and 2 histone acetyltransferases are involved in cellular patterning of Arabidopsis root epidermis.

Wen-Qian Chen1,2, Dong-Xu Li1,2, Feng Zhao1,2, Zhi-Hong Xu1,2, Shu-Nong Bai1,2.   

Abstract

The cellular patterning of Arabidopsis root epidermis is a well-characterized system for study of how single-layered cells are arranged in a particular spatial order. Previously, we found that histone acetylation plays an important role in regulating epidermal differentiation by relaying positional information. To investigate the underlying mechanisms, we screened all available mutants of both HDAC and HAT families. Analyses of mutants of HDAC family members revealed that among single mutants, only HDA6, HDA18 and HDA19 exhibited ectopic H cells at the N position. Similarly, among HAT family members, only single mutants for GCN5 and HAF2 exhibited altered epidermal phenotypes, which were unexpectedly similar to the phenotypes observed in HDAC mutants. Based on these results, together with the previous findings regarding the regulatory mechanisms of HDA18 and HDA6, we proposed that homeostasis of histone acetylation is important for robustness of the regulatory network responsible for the cellular patterning of the Arabidopsis root epidermis.

Entities:  

Keywords:  Arabidopsis root epidermis; cellular patterning; histone acetyltransferase (HAT); histone deacetylase; mutant analysis

Mesh:

Substances:

Year:  2016        PMID: 26689639      PMCID: PMC4883955          DOI: 10.1080/15592324.2015.1131373

Source DB:  PubMed          Journal:  Plant Signal Behav        ISSN: 1559-2316


  8 in total

1.  Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes.

Authors:  Ritu Pandey; Andreas Müller; Carolyn A Napoli; David A Selinger; Craig S Pikaard; Eric J Richards; Judith Bender; David W Mount; Richard A Jorgensen
Journal:  Nucleic Acids Res       Date:  2002-12-01       Impact factor: 16.971

2.  Erasure of histone acetylation by Arabidopsis HDA6 mediates large-scale gene silencing in nucleolar dominance.

Authors:  Keith Earley; Richard J Lawrence; Olga Pontes; Rachel Reuther; Angel J Enciso; Manuela Silva; Nuno Neves; Michael Gross; Wanda Viegas; Craig S Pikaard
Journal:  Genes Dev       Date:  2006-04-28       Impact factor: 11.361

3.  Histone acetylation affects expression of cellular patterning genes in the Arabidopsis root epidermis.

Authors:  Cheng-Ran Xu; Cui Liu; Yi-Lan Wang; Lin-Chen Li; Wen-Qian Chen; Zhi-Hong Xu; Shu-Nong Bai
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-21       Impact factor: 11.205

4.  HISTONE DEACETYLASE6-Defective Mutants Show Increased Expression and Acetylation of ENHANCER OF TRIPTYCHON AND CAPRICE1 and GLABRA2 with Small But Significant Effects on Root Epidermis Cellular Pattern.

Authors:  Dong-Xu Li; Wen-Qian Chen; Zhi-Hong Xu; Shu-Nong Bai
Journal:  Plant Physiol       Date:  2015-07-04       Impact factor: 8.340

5.  Arabidopsis thaliana histone deacetylase 1 (AtHD1) is localized in euchromatic regions and demonstrates histone deacetylase activity in vitro.

Authors:  Paulus M Fong; Lu Tian; Z Jeffrey Chen
Journal:  Cell Res       Date:  2006-05       Impact factor: 25.617

6.  HDA18 affects cell fate in Arabidopsis root epidermis via histone acetylation at four kinase genes.

Authors:  Cui Liu; Lin-Chen Li; Wen-Qian Chen; Xian Chen; Zhi-Hong Xu; Shu-Nong Bai
Journal:  Plant Cell       Date:  2013-01-29       Impact factor: 11.277

7.  Phylogenetic analysis, subcellular localization, and expression patterns of RPD3/HDA1 family histone deacetylases in plants.

Authors:  Malona V Alinsug; Chun-Wei Yu; Keqiang Wu
Journal:  BMC Plant Biol       Date:  2009-03-28       Impact factor: 4.215

Review 8.  Regulation of epidermal cell fate in Arabidopsis roots: the importance of multiple feedback loops.

Authors:  John Schiefelbein; Ling Huang; Xiaohua Zheng
Journal:  Front Plant Sci       Date:  2014-02-17       Impact factor: 5.753

  8 in total
  4 in total

1.  Histone Deacetylase HDA19 Affects Root Cortical Cell Fate by Interacting with SCARECROW.

Authors:  Wen-Qian Chen; Colleen Drapek; Dong-Xu Li; Zhi-Hong Xu; Philip N Benfey; Shu-Nong Bai
Journal:  Plant Physiol       Date:  2019-02-08       Impact factor: 8.340

2.  HISTONE DEACETYLASE 19 and the flowering time gene FD maintain reproductive meristem identity in an age-dependent manner.

Authors:  Sasha R Gorham; Aaron I Weiner; Maryam Yamadi; Naden T Krogan
Journal:  J Exp Bot       Date:  2018-09-14       Impact factor: 6.992

Review 3.  The Histone Acetyltransferase GCN5 and the Associated Coactivators ADA2: From Evolution of the SAGA Complex to the Biological Roles in Plants.

Authors:  Konstantinos Vlachonasios; Stylianos Poulios; Niki Mougiou
Journal:  Plants (Basel)       Date:  2021-02-05

Review 4.  Chromatin-Based Regulation of Plant Root Development.

Authors:  Dong-Hong Chen; Yong Huang; Changhua Jiang; Jin-Ping Si
Journal:  Front Plant Sci       Date:  2018-10-16       Impact factor: 5.753

  4 in total

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