Literature DB >> 2668344

Efficient selection of tests for bacteriological typing schemes.

M A Gaston1, P R Hunter.   

Abstract

To simplify the selection of tests for bacteriological typing methods, such as bacteriophage, bacteriocin, and biotyping, a computerised method was assessed. This uses a numerical index of discrimination (D) to facilitate the selection of an efficient typing set. The computer programs take the most discriminatory test as the initial test in the partial typing set, and then select the next test by combining each of the remaining candidates with the partial set and choosing the test which maximises D. This cycle is repeated until the remaining candidates do not increase the discriminatory power of the typing set. Options are provided for the investigator to pre-select certain tests for inclusion or exclusion from the typing set. It is concluded that the numerical index D is a simple means of test selection, but it must be emphasised that it is important to combine its use with data on the incidence of reaction in each test, on reproducibility, and on the similarity among tests.

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Year:  1989        PMID: 2668344      PMCID: PMC1142031          DOI: 10.1136/jcp.42.7.763

Source DB:  PubMed          Journal:  J Clin Pathol        ISSN: 0021-9746            Impact factor:   3.411


  8 in total

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Authors:  E S ANDERSON; R E WILLIAMS
Journal:  J Clin Pathol       Date:  1956-05       Impact factor: 3.411

2.  Bacteriophage typing of Staphylococcus aureus.

Authors:  R E O WILLIAMS; J E RIPPON
Journal:  J Hyg (Lond)       Date:  1952-09

3.  Numerical index of the discriminatory ability of typing systems: an application of Simpson's index of diversity.

Authors:  P R Hunter; M A Gaston
Journal:  J Clin Microbiol       Date:  1988-11       Impact factor: 5.948

4.  Selecting an economical binary test battery for a set of microbial cultures.

Authors:  S I Niemelä; J W Hopkins; C Quadling
Journal:  Can J Microbiol       Date:  1968-03       Impact factor: 2.419

5.  Automatic construction and use of an identification scheme.

Authors:  E W Rypka; R Babb
Journal:  Med Res Eng       Date:  1970-04

6.  New bacteriophage typing scheme for subdivision of the frequent capsular serotypes of Klebsiella spp.

Authors:  M A Gaston; B A Ayling-Smith; T L Pitt
Journal:  J Clin Microbiol       Date:  1987-07       Impact factor: 5.948

7.  Comparison of numerical procedures for grouping pseudomonas bacteriophages according to lytic spectra.

Authors:  T Bergan
Journal:  Acta Pathol Microbiol Scand B Microbiol Immunol       Date:  1972

8.  Isolation and selection of a bacteriophage-typing set for Enterobacter cloacae.

Authors:  M A Gaston
Journal:  J Med Microbiol       Date:  1987-12       Impact factor: 2.472

  8 in total
  8 in total

1.  Reproducibility and indices of discriminatory power of microbial typing methods.

Authors:  P R Hunter
Journal:  J Clin Microbiol       Date:  1990-09       Impact factor: 5.948

2.  Comparison of multilocus enzyme electrophoresis (MEE), ribotyping, restriction enzyme analysis (REA) and phage typing for typing of Listeria monocytogenes.

Authors:  B Nørrung; P Gerner-Smidt
Journal:  Epidemiol Infect       Date:  1993-08       Impact factor: 2.451

3.  Molecular analysis of population structure and antibiotic resistance of Klebsiella isolates from a three-year surveillance program in Florence hospitals, Italy.

Authors:  F Donnarumma; C Indorato; G Mastromei; E Goti; P Nicoletti; P Pecile; R Fanci; A Bosi; E Casalone
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2011-07-09       Impact factor: 3.267

4.  Molecular characterization of acinetobacter isolates collected in intensive care units of six hospitals in Florence, Italy, during a 3-year surveillance program: a population structure analysis.

Authors:  Francesca Donnarumma; Simona Sergi; Cristina Indorato; Giorgio Mastromei; Roberto Monnanni; Pieluigi Nicoletti; Patrizia Pecile; Daniela Cecconi; Roberta Mannino; Sara Bencini; Rosa Fanci; Alberto Bosi; Enrico Casalone
Journal:  J Clin Microbiol       Date:  2010-02-24       Impact factor: 5.948

5.  Prevalence of coagulase gene polymorphism in Staphylococcus aureus isolates causing bovine mastitis.

Authors:  F M Aarestrup; C A Dangler; L M Sordillo
Journal:  Can J Vet Res       Date:  1995-04       Impact factor: 1.310

6.  Mycobacterium avium subsp. hominissuis infection in swine associated with peat used for bedding.

Authors:  Tone Bjordal Johansen; Angelika Agdestein; Bjørn Lium; Anne Jørgensen; Berit Djønne
Journal:  Biomed Res Int       Date:  2014-09-15       Impact factor: 3.411

7.  Genetic diversity of Mycobacterium tuberculosis isolates from Beijing, China assessed by Spoligotyping, LSPs and VNTR profiles.

Authors:  Bing Lu; Ping Zhao; Binbin Liu; Haiyan Dong; Qin Yu; Xiuqin Zhao; Kanglin Wan
Journal:  BMC Infect Dis       Date:  2012-12-23       Impact factor: 3.090

8.  Enterohemorrhagic Escherichia coli O157 subclade 8b strains in Chiba Prefecture, Japan, produced larger amounts of Shiga toxin 2 than strains in subclade 8a and other clades.

Authors:  Shinichiro Hirai; Eiji Yokoyama; Taku Wakui; Taichiro Ishige; Masaki Nakamura
Journal:  PLoS One       Date:  2018-01-30       Impact factor: 3.240

  8 in total

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